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Search of human proteins with 238776801
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238776801 SVH protein isoform f [Homo sapiens]
(225 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238776801 SVH protein isoform f [Homo sapiens] 441 e-124
gi|238776799 SVH protein isoform d [Homo sapiens] 427 e-120
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 426 e-120
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 423 e-119
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 423 e-119
gi|238776795 SVH protein isoform c [Homo sapiens] 410 e-115
gi|238776797 SVH protein isoform e [Homo sapiens] 392 e-109
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 392 e-109
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 389 e-108
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 389 e-108
gi|238776793 SVH protein isoform b [Homo sapiens] 280 9e-76
gi|31377663 SVH protein isoform a [Homo sapiens] 262 2e-70
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 106 2e-23
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 103 2e-22
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 103 2e-22
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 103 2e-22
gi|7662162 ALEX2 protein [Homo sapiens] 97 1e-20
gi|29540562 ALEX2 protein [Homo sapiens] 97 1e-20
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 73 2e-13
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 54 1e-07
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 53 2e-07
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 53 2e-07
gi|216547715 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547682 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547672 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547663 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547655 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547646 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|216547639 basic helix-loop-helix domain containing, class B, ... 46 3e-05
gi|39930463 basic helix-loop-helix domain containing, class B, 9... 46 3e-05
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 441 bits (1134), Expect = e-124
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLA 180
EKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLA
Sbjct: 121 EKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLA 180
Query: 181 VQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
VQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 181 VQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 427 bits (1099), Expect = e-120
Identities = 225/249 (90%), Positives = 225/249 (90%), Gaps = 24/249 (9%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIK------------------------VDSSFLSLYDSHVAK 156
EKALNALNNLSVNVENQIKIK VDSSFLSLYDSHVAK
Sbjct: 121 EKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAK 180
Query: 157 EILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKE 216
EILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKE
Sbjct: 181 EILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKE 240
Query: 217 KVVTIIPKI 225
KVVTIIPKI
Sbjct: 241 KVVTIIPKI 249
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 426 bits (1095), Expect = e-120
Identities = 225/253 (88%), Positives = 225/253 (88%), Gaps = 28/253 (11%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIK----------------------------VDSSFLSLYDS 152
EKALNALNNLSVNVENQIKIK VDSSFLSLYDS
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 153 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 212
HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 213 EVKEKVVTIIPKI 225
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 423 bits (1087), Expect = e-119
Identities = 223/253 (88%), Positives = 225/253 (88%), Gaps = 28/253 (11%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIK----------------------------VDSSFLSLYDS 152
+KALNALNNLSVNVENQIKIK VDSSFLSLYDS
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 153 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 212
HVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 213 EVKEKVVTIIPKI 225
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 423 bits (1087), Expect = e-119
Identities = 223/253 (88%), Positives = 225/253 (88%), Gaps = 28/253 (11%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIK----------------------------VDSSFLSLYDS 152
+KALNALNNLSVNVENQIKIK VDSSFLSLYDS
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 153 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 212
HVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 213 EVKEKVVTIIPKI 225
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 410 bits (1053), Expect = e-115
Identities = 225/284 (79%), Positives = 225/284 (79%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK---- 141
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
Query: 142 --------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 392 bits (1006), Expect = e-109
Identities = 215/284 (75%), Positives = 220/284 (77%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNA-----------------------------------------LNNLSVNVENQIK 139
EKALNA L N++V ++Q
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 140 I------------------KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
+ KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 392 bits (1006), Expect = e-109
Identities = 215/284 (75%), Positives = 220/284 (77%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNA-----------------------------------------LNNLSVNVENQIK 139
EKALNA L N++V ++Q
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 140 I------------------KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
+ KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 389 bits (998), Expect = e-108
Identities = 213/284 (75%), Positives = 220/284 (77%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNA-----------------------------------------LNNLSVNVENQIK 139
+KALNA L N++V ++Q
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 140 I------------------KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
+ KVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 389 bits (998), Expect = e-108
Identities = 213/284 (75%), Positives = 220/284 (77%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNA-----------------------------------------LNNLSVNVENQIK 139
+KALNA L N++V ++Q
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 140 I------------------KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
+ KVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 280 bits (715), Expect = 9e-76
Identities = 147/171 (85%), Positives = 154/171 (90%), Gaps = 2/171 (1%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKVDSSFL--SLYDSHVAKEILLRVLTLFQNI 169
EKALNALNNLSVNVENQIKIK+ S + ++ + + L LTL N+
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNM 171
Score = 177 bits (449), Expect = 6e-45
Identities = 93/113 (82%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Query: 116 NQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 172
N + K + L L NLS N E ++ +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNC
Sbjct: 196 NGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 255
Query: 173 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 256 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 262 bits (669), Expect = 2e-70
Identities = 147/206 (71%), Positives = 154/206 (74%), Gaps = 37/206 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVDSS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ S
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 146 FL--SLYDSHVAKEILLRVLTLFQNI 169
+ ++ + + L LTL N+
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNM 206
Score = 177 bits (449), Expect = 6e-45
Identities = 93/113 (82%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Query: 116 NQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 172
N + K + L L NLS N E ++ +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNC
Sbjct: 231 NGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 290
Query: 173 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 291 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 106 bits (264), Expect = 2e-23
Identities = 55/87 (63%), Positives = 65/87 (74%)
Query: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
Query: 115 SNQSIKEKALNALNNLSVNVENQIKIK 141
+ I+EK NALNNLSVN ENQ KIK
Sbjct: 259 KDPIIREKTYNALNNLSVNAENQGKIK 285
Score = 70.5 bits (171), Expect = 1e-12
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 43/199 (21%)
Query: 70 LESTEDPVIIERALITLGNNAAFSVNQAIIR-------------------ELGGIPIVAN 110
L T+DP+I E+ L N + + NQ I+ ++ G+ ++ N
Sbjct: 255 LIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTN 314
Query: 111 KI--NH------------------SNQSIKEKALNALNNLSVN---VENQIKIKVDSSFL 147
NH N K + + + N + N + KV S +
Sbjct: 315 MTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELI 374
Query: 148 SLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL 206
SL++ +EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL
Sbjct: 375 SLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKAL 434
Query: 207 VDHHDAEVKEKVVTIIPKI 225
+H+D VK KV+ ++ K+
Sbjct: 435 ANHNDLVVKVKVLKVLTKL 453
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 103 bits (256), Expect = 2e-22
Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++KV
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKV 202
Score = 71.6 bits (174), Expect = 5e-13
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 72 STEDPVIIERALITLGNNAAFSVNQAIIR-------------------ELGGIPI----- 107
+T DP++ E+ALI L N + + NQ ++ +L G+ +
Sbjct: 173 NTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMT 232
Query: 108 VANKINH---------------SNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSL 149
V N+ H N+ K + L L NL+ N ++ +V SS SL
Sbjct: 233 VTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSL 292
Query: 150 YDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVD 208
++ KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ +
Sbjct: 293 FNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIES 352
Query: 209 HHDAEVKEKVVTIIPKI 225
HHD VK KV + K+
Sbjct: 353 HHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 5e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 103 bits (256), Expect = 2e-22
Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++KV
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKV 202
Score = 71.6 bits (174), Expect = 5e-13
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 72 STEDPVIIERALITLGNNAAFSVNQAIIR-------------------ELGGIPI----- 107
+T DP++ E+ALI L N + + NQ ++ +L G+ +
Sbjct: 173 NTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMT 232
Query: 108 VANKINH---------------SNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSL 149
V N+ H N+ K + L L NL+ N ++ +V SS SL
Sbjct: 233 VTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSL 292
Query: 150 YDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVD 208
++ KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ +
Sbjct: 293 FNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIES 352
Query: 209 HHDAEVKEKVVTIIPKI 225
HHD VK KV + K+
Sbjct: 353 HHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 5e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 103 bits (256), Expect = 2e-22
Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++KV
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKV 202
Score = 71.6 bits (174), Expect = 5e-13
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 72 STEDPVIIERALITLGNNAAFSVNQAIIR-------------------ELGGIPI----- 107
+T DP++ E+ALI L N + + NQ ++ +L G+ +
Sbjct: 173 NTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMT 232
Query: 108 VANKINH---------------SNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSL 149
V N+ H N+ K + L L NL+ N ++ +V SS SL
Sbjct: 233 VTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSL 292
Query: 150 YDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVD 208
++ KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ +
Sbjct: 293 FNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIES 352
Query: 209 HHDAEVKEKVVTIIPKI 225
HHD VK KV + K+
Sbjct: 353 HHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 5e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 97.1 bits (240), Expect = 1e-20
Identities = 52/115 (45%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQV 467
Score = 68.6 bits (166), Expect = 4e-12
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Query: 112 INHSNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQN 168
++ IK + L L+N + N ++ + +V +SF SLY+S+V EIL+ LTLF+
Sbjct: 517 LSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEI 576
Query: 169 IKNCLKIEGHLAVQPTFTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 224
I + L+ E + F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 577 IYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 1e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 97.1 bits (240), Expect = 1e-20
Identities = 52/115 (45%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQV 467
Score = 68.6 bits (166), Expect = 4e-12
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Query: 112 INHSNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQN 168
++ IK + L L+N + N ++ + +V +SF SLY+S+V EIL+ LTLF+
Sbjct: 517 LSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEI 576
Query: 169 IKNCLKIEGHLAVQPTFTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 224
I + L+ E + F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 577 IYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 1e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 72.8 bits (177), Expect = 2e-13
Identities = 34/84 (40%), Positives = 57/84 (67%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 118 SIKEKALNALNNLSVNVENQIKIK 141
S+++KALNALNN+SV EN K+K
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVK 2213
Score = 54.3 bits (129), Expect = 8e-08
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 120 KEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIE 176
K+ L L N S N ++ + +S ++++ KE +L L+LF+NI K
Sbjct: 2272 KDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKETKENILNALSLFENINYHFKRR 2331
Query: 177 GHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDAEVKEKVVTIIPKI 225
Q F++ SL+FL + CA+K+RAL + +D EVKE+V +I K+
Sbjct: 2332 AKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDPEVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 122 KALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
K + L+ N I KV SS ++ ++ + +K +L ++ +F+NI K + L
Sbjct: 454 KVFSCLSKNHANTRELISAKVLSSLVAPFNKNESKANILNIIEIFENINFQFKTKAKLFT 513
Query: 182 QPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
+ FT+ L + ++ QK++ L +H D EV++KV+ +I K+
Sbjct: 514 KEKFTKSELISIFQEAKQFGQKLQDLAEHSDPEVRDKVIRLILKL 558
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo
sapiens]
Length = 300
Score = 52.8 bits (125), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
MG R GW+AAGL++GAGACYC+Y+LT GR
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR 31
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo
sapiens]
Length = 300
Score = 52.8 bits (125), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
MG R GW+AAGL++GAGACYC+Y+LT GR
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR 31
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547655 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547646 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|216547639 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
>gi|39930463 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 45.8 bits (107), Expect = 3e-05
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 177
+++K + LN S + E Q KI+ L+ H+ KE + L ++ LKI G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIE-------LHVKHMCKETMSFPLN-SPGQQSGLKILG 430
Query: 178 --------HLAVQPTFTEGSLFFLLHGEECAQKIRALV 207
H V F+E LF LL C K R LV
Sbjct: 431 QLTTDFVHHYIVANYFSE--LFHLLSSGNC--KTRNLV 464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,381,116
Number of Sequences: 37866
Number of extensions: 283261
Number of successful extensions: 930
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 107
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.