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Search of human proteins with 238776797
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238776797 SVH protein isoform e [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238776797 SVH protein isoform e [Homo sapiens] 558 e-159
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 556 e-159
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 553 e-158
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 553 e-158
gi|238776793 SVH protein isoform b [Homo sapiens] 545 e-155
gi|31377663 SVH protein isoform a [Homo sapiens] 527 e-150
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 480 e-136
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 477 e-135
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 477 e-135
gi|238776799 SVH protein isoform d [Homo sapiens] 427 e-120
gi|238776795 SVH protein isoform c [Homo sapiens] 409 e-114
gi|238776801 SVH protein isoform f [Homo sapiens] 392 e-109
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 216 2e-56
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 212 3e-55
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 212 3e-55
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 212 3e-55
gi|7662162 ALEX2 protein [Homo sapiens] 201 8e-52
gi|29540562 ALEX2 protein [Homo sapiens] 201 8e-52
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 169 2e-42
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 114 7e-26
gi|51702248 G protein-coupled receptor associated sorting protei... 86 5e-17
gi|19923967 G protein-coupled receptor associated sorting protei... 86 5e-17
gi|150378528 G protein-coupled receptor associated sorting prote... 83 2e-16
gi|150378489 G protein-coupled receptor associated sorting prote... 83 2e-16
gi|103472136 G protein-coupled receptor associated sorting prote... 83 2e-16
gi|216547715 basic helix-loop-helix domain containing, class B, ... 83 2e-16
gi|216547682 basic helix-loop-helix domain containing, class B, ... 83 2e-16
gi|216547672 basic helix-loop-helix domain containing, class B, ... 83 2e-16
gi|216547663 basic helix-loop-helix domain containing, class B, ... 83 2e-16
gi|216547655 basic helix-loop-helix domain containing, class B, ... 83 2e-16
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 558 bits (1439), Expect = e-159
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 556 bits (1433), Expect = e-159
Identities = 283/284 (99%), Positives = 283/284 (99%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 553 bits (1425), Expect = e-158
Identities = 281/284 (98%), Positives = 283/284 (99%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 553 bits (1425), Expect = e-158
Identities = 281/284 (98%), Positives = 283/284 (99%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 545 bits (1404), Expect = e-155
Identities = 284/308 (92%), Positives = 284/308 (92%), Gaps = 24/308 (7%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 216
LHSYITDLFQVLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
Query: 217 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 276
ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
Query: 277 VVTIIPKI 284
VVTIIPKI
Sbjct: 301 VVTIIPKI 308
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 527 bits (1358), Expect = e-150
Identities = 284/343 (82%), Positives = 284/343 (82%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK----- 200
QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
Query: 201 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
Query: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 480 bits (1236), Expect = e-136
Identities = 253/284 (89%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 209
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 477 bits (1228), Expect = e-135
Identities = 251/284 (88%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 477 bits (1228), Expect = e-135
Identities = 251/284 (88%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 427 bits (1098), Expect = e-120
Identities = 230/284 (80%), Positives = 236/284 (83%), Gaps = 35/284 (12%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIK+ + L LL N++
Sbjct: 121 EKALNALNNLSVNVENQIKIKVQV--------------------LKLLLNLSEN------ 154
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
+ G +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 155 ---------PAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 205
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 206 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 249
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 409 bits (1052), Expect = e-114
Identities = 230/319 (72%), Positives = 236/319 (73%), Gaps = 70/319 (21%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
Query: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSF 205
L LL N++ + G +VDSSF
Sbjct: 180 -------------------LKLLLNLSEN---------------PAMTEGLLRAQVDSSF 205
Query: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL
Sbjct: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
Query: 266 VDHHDAEVKEKVVTIIPKI 284
VDHHDAEVKEKVVTIIPKI
Sbjct: 266 VDHHDAEVKEKVVTIIPKI 284
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 392 bits (1006), Expect = e-109
Identities = 215/284 (75%), Positives = 220/284 (77%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNA L N++V ++Q
Sbjct: 121 EKALNA-----------------------------------------LNNLSVNVENQIK 139
Query: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
+ KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 140 I------------------KVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 216 bits (549), Expect = 2e-56
Identities = 124/255 (48%), Positives = 159/255 (62%), Gaps = 25/255 (9%)
Query: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
Query: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVT 174
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVT
Sbjct: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
Query: 175 NDHQHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYD 210
N +QH+L D F +L GN T KV S +SL++
Sbjct: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
Query: 211 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 269
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
Query: 270 DAEVKEKVVTIIPKI 284
D VK KV+ ++ K+
Sbjct: 439 DLVVKVKVLKVLTKL 453
Score = 49.7 bits (117), Expect = 3e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 212 bits (540), Expect = 3e-55
Identities = 125/283 (44%), Positives = 174/283 (61%), Gaps = 27/283 (9%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 7e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 212 bits (540), Expect = 3e-55
Identities = 125/283 (44%), Positives = 174/283 (61%), Gaps = 27/283 (9%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 7e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 212 bits (540), Expect = 3e-55
Identities = 125/283 (44%), Positives = 174/283 (61%), Gaps = 27/283 (9%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 7e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 201 bits (510), Expect = 8e-52
Identities = 117/281 (41%), Positives = 174/281 (61%), Gaps = 32/281 (11%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 243
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 201 bits (510), Expect = 8e-52
Identities = 117/281 (41%), Positives = 174/281 (61%), Gaps = 32/281 (11%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 243
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 169 bits (429), Expect = 2e-42
Identities = 93/253 (36%), Positives = 152/253 (60%), Gaps = 26/253 (10%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
S+++KALNALNN+SV EN K+K Y++QVCED + PLNS VQLAGL L+ ++T+T+++
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 178 QHMLHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHV 213
QHM+ +YI++ ++L G+G TK +S ++++
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 214 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDA 271
KE +L L+LF+NI K Q F++ SL+FL + CA+K+RAL + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 272 EVKEKVVTIIPKI 284
EVKE+V +I K+
Sbjct: 2370 EVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 114 bits (286), Expect = 7e-26
Identities = 74/252 (29%), Positives = 132/252 (52%), Gaps = 25/252 (9%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
L ++ KL+ LL+ T+DP I E A + +G + A+ Q II ++G ++ N +N+ N
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
AL+ +++ S + E + YI QVC+ + S PLNS VQLAGL LL ++++ +
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 178 QHMLHSYITDLFQVLLTGNGNT------------------------KVDSSFLSLYDSHV 213
+++ SYI D +L G+ T KV SS ++ ++ +
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 214 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAE 272
+K +L ++ +F+NI K + L + FT+ L + ++ QK++ L +H D E
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 273 VKEKVVTIIPKI 284
V++KV+ +I K+
Sbjct: 547 VRDKVIRLILKL 558
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 85.5 bits (210), Expect = 5e-17
Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 36/250 (14%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVD------------------------SSFLSLYDSHV 213
++ +Y++ +L T N TK S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 214 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 267
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 268 H-HDAEVKEK 276
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 85.5 bits (210), Expect = 5e-17
Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 36/250 (14%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVD------------------------SSFLSLYDSHV 213
++ +Y++ +L T N TK S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 214 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 267
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 268 H-HDAEVKEK 276
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVD------------------------SSFLSLYDSHV 213
++ +Y++ +L TGN T+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 214 AKEILLRVLTLFQNIKNCLKIE 235
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVD------------------------SSFLSLYDSHV 213
++ +Y++ +L TGN T+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 214 AKEILLRVLTLFQNIKNCLKIE 235
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVD------------------------SSFLSLYDSHV 213
++ +Y++ +L TGN T+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 214 AKEILLRVLTLFQNIKNCLKIE 235
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/143 (30%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTK 200
+++ +Y ++LF +L +GN T+
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTR 461
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/143 (30%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTK 200
+++ +Y ++LF +L +GN T+
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTR 461
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/143 (30%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTK 200
+++ +Y ++LF +L +GN T+
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTR 461
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/143 (30%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTK 200
+++ +Y ++LF +L +GN T+
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTR 461
>gi|216547655 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/143 (30%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTK 200
+++ +Y ++LF +L +GN T+
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTR 461
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,417,239
Number of Sequences: 37866
Number of extensions: 364286
Number of successful extensions: 1121
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 105
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.