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Search of human proteins with 238776793
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238776793 SVH protein isoform b [Homo sapiens]
(308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238776793 SVH protein isoform b [Homo sapiens] 602 e-172
gi|31377663 SVH protein isoform a [Homo sapiens] 584 e-167
gi|238776797 SVH protein isoform e [Homo sapiens] 545 e-155
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 543 e-155
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 540 e-154
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 540 e-154
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 467 e-132
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 464 e-131
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 464 e-131
gi|238776795 SVH protein isoform c [Homo sapiens] 417 e-117
gi|238776799 SVH protein isoform d [Homo sapiens] 386 e-107
gi|238776801 SVH protein isoform f [Homo sapiens] 280 1e-75
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 262 3e-70
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 262 3e-70
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 262 3e-70
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 255 3e-68
gi|7662162 ALEX2 protein [Homo sapiens] 236 2e-62
gi|29540562 ALEX2 protein [Homo sapiens] 236 2e-62
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 205 5e-53
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 141 6e-34
gi|51702248 G protein-coupled receptor associated sorting protei... 123 2e-28
gi|19923967 G protein-coupled receptor associated sorting protei... 123 2e-28
gi|150378528 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|150378489 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|103472136 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|216547715 basic helix-loop-helix domain containing, class B, ... 112 3e-25
gi|216547682 basic helix-loop-helix domain containing, class B, ... 112 3e-25
gi|216547672 basic helix-loop-helix domain containing, class B, ... 112 3e-25
gi|216547663 basic helix-loop-helix domain containing, class B, ... 112 3e-25
gi|216547655 basic helix-loop-helix domain containing, class B, ... 112 3e-25
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 602 bits (1552), Expect = e-172
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 301 VVTIIPKI 308
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 584 bits (1506), Expect = e-167
Identities = 308/343 (89%), Positives = 308/343 (89%), Gaps = 35/343 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 205
QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
Query: 206 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 265
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
Query: 266 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 545 bits (1404), Expect = e-155
Identities = 284/308 (92%), Positives = 284/308 (92%), Gaps = 24/308 (7%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
LHSYITDLFQVLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 216
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 217 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 276
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 277 VVTIIPKI 284
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 543 bits (1398), Expect = e-155
Identities = 283/308 (91%), Positives = 283/308 (91%), Gaps = 24/308 (7%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
LHSYITDLFQVLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 216
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 217 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 276
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 277 VVTIIPKI 284
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 540 bits (1390), Expect = e-154
Identities = 281/308 (91%), Positives = 283/308 (91%), Gaps = 24/308 (7%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
LHSYITDLFQVLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 216
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 217 ILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 276
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 277 VVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 540 bits (1390), Expect = e-154
Identities = 281/308 (91%), Positives = 283/308 (91%), Gaps = 24/308 (7%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHM
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
LHSYITDLFQVLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 216
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 217 ILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 276
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 277 VVTIIPKI 284
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 467 bits (1201), Expect = e-132
Identities = 253/308 (82%), Positives = 253/308 (82%), Gaps = 55/308 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
VLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 160 ----------VLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 185
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 186 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 245
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 246 VVTIIPKI 253
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 464 bits (1193), Expect = e-131
Identities = 251/308 (81%), Positives = 253/308 (82%), Gaps = 55/308 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
VLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 160 ----------VLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 185
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 186 ILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 245
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 246 VVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 464 bits (1193), Expect = e-131
Identities = 251/308 (81%), Positives = 253/308 (82%), Gaps = 55/308 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
VLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 160 ----------VLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 185
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
ILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 186 ILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 245
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 246 VVTIIPKI 253
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 417 bits (1073), Expect = e-117
Identities = 239/343 (69%), Positives = 244/343 (71%), Gaps = 94/343 (27%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA------------------- 161
Query: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 205
L N++V ++Q + KVQVLK
Sbjct: 162 ----------------------LNNLSVNVENQIKI------------------KVQVLK 181
Query: 206 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 265
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 182 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
Query: 266 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 386 bits (992), Expect = e-107
Identities = 218/308 (70%), Positives = 227/308 (73%), Gaps = 59/308 (19%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
EKALNALNNLSVNVENQIKIK+ + ++ L L N +T
Sbjct: 121 EKALNALNNLSVNVENQIKIKVQVLKLL----------------LNLSENPAMT------ 158
Query: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
G + QV L+L ++ E LLR
Sbjct: 159 ---------------EGLLRAQVDSSFLSLYDSHVAKEILLR------------------ 185
Query: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 186 ----VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 241
Query: 301 VVTIIPKI 308
VVTIIPKI
Sbjct: 242 VVTIIPKI 249
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 280 bits (715), Expect = 1e-75
Identities = 147/171 (85%), Positives = 154/171 (90%), Gaps = 2/171 (1%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNM 171
EKALNALNNLSVNVENQIKIK+ S + ++ + + L LTL N+
Sbjct: 121 EKALNALNNLSVNVENQIKIKVDSSFL--SLYDSHVAKEILLRVLTLFQNI 169
Score = 177 bits (449), Expect = 1e-44
Identities = 93/113 (82%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Query: 196 NGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 255
N + K + L L NLS N E ++ +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNC
Sbjct: 116 NQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 172
Query: 256 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 173 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 262 bits (669), Expect = 3e-70
Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 3/283 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKL 206
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK+QVLKL
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 207 LLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 266
LLNL+ENPAMT LLRAQV SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 267 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 262 bits (669), Expect = 3e-70
Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 3/283 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKL 206
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK+QVLKL
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 207 LLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 266
LLNL+ENPAMT LLRAQV SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 267 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 262 bits (669), Expect = 3e-70
Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 3/283 (1%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKL 206
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK+QVLKL
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 207 LLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 266
LLNL+ENPAMT LLRAQV SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 267 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 255 bits (652), Expect = 3e-68
Identities = 135/255 (52%), Positives = 178/255 (69%), Gaps = 1/255 (0%)
Query: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
Query: 115 SNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVT 174
+ I+EK NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVT
Sbjct: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
Query: 175 NDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYD 234
N +QH+L D F +L GN TK+Q++KL++N +ENPAMT L+ +V S +SL++
Sbjct: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
Query: 235 SHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 293
+EILL +LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
Query: 294 DAEVKEKVVTIIPKI 308
D VK KV+ ++ K+
Sbjct: 439 DLVVKVKVLKVLTKL 453
Score = 49.7 bits (117), Expect = 3e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 236 bits (602), Expect = 2e-62
Identities = 129/281 (45%), Positives = 189/281 (67%), Gaps = 8/281 (2%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLL 207
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 208 LNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 267
N +ENP M + LL QV +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 268 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 307
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 236 bits (602), Expect = 2e-62
Identities = 129/281 (45%), Positives = 189/281 (67%), Gaps = 8/281 (2%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLL 207
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 208 LNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 267
N +ENP M + LL QV +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 268 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 307
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 205 bits (521), Expect = 5e-53
Identities = 106/253 (41%), Positives = 169/253 (66%), Gaps = 2/253 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
S+++KALNALNN+SV EN K+K Y++QVCED + PLNS VQLAGL L+ ++T+T+++
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
QHM+ +YI++ ++L G+G TK VL +LLN S+NP+MT+ LL A +S ++++
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 238 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDA 295
KE +L L+LF+NI K Q F++ SL+FL + CA+K+RAL + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 296 EVKEKVVTIIPKI 308
EVKE+V +I K+
Sbjct: 2370 EVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 141 bits (356), Expect = 6e-34
Identities = 84/252 (33%), Positives = 146/252 (57%), Gaps = 1/252 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
L ++ KL+ LL+ T+DP I E A + +G + A+ Q II ++G ++ N +N+ N
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
AL+ +++ S + E + YI QVC+ + S PLNS VQLAGL LL ++++ +
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ SYI D +L G+ TK VLK+ LS+N A T L+ A+V SS ++ ++ +
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 238 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAE 296
+K +L ++ +F+NI K + L + FT+ L + ++ QK++ L +H D E
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 297 VKEKVVTIIPKI 308
V++KV+ +I K+
Sbjct: 547 VRDKVIRLILKL 558
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 123 bits (309), Expect = 2e-28
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 12/250 (4%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
++ +Y++ +L T N TK VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 238 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 291
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 292 H-HDAEVKEK 300
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 123 bits (309), Expect = 2e-28
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 12/250 (4%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
++ +Y++ +L T N TK VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 238 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 291
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 292 H-HDAEVKEK 300
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 238 AKEILLRVLTLFQNIKNCLKIE 259
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 238 AKEILLRVLTLFQNIKNCLKIE 259
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 238 AKEILLRVLTLFQNIKNCLKIE 259
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 3e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 238 AKEILLRVLTLFQNIKNCLK 257
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 3e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 238 AKEILLRVLTLFQNIKNCLK 257
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 3e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 238 AKEILLRVLTLFQNIKNCLK 257
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 3e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 238 AKEILLRVLTLFQNIKNCLK 257
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547655 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 3e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 177
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 178 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 237
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 238 AKEILLRVLTLFQNIKNCLK 257
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,061,414
Number of Sequences: 37866
Number of extensions: 390188
Number of successful extensions: 1225
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1108
Number of HSP's gapped (non-prelim): 102
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.