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Search of human proteins with 238624195
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo
sapiens]
(496 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo sapi... 1041 0.0
gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo sapi... 622 e-178
gi|238624193 hypothetical protein LOC221545 isoform 2 [Homo sapi... 332 5e-91
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 60 5e-09
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 60 5e-09
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 58 2e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 55 1e-07
gi|160707881 formin 2 [Homo sapiens] 53 6e-07
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 50 5e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 49 8e-06
gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex... 49 8e-06
gi|18079216 CASK interacting protein 1 [Homo sapiens] 49 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 48 2e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 48 2e-05
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 45 1e-04
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 45 1e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 45 1e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 45 1e-04
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 44 3e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 3e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 44 3e-04
gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr... 44 4e-04
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 43 6e-04
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 43 8e-04
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 43 8e-04
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 42 0.001
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 42 0.001
>gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo
sapiens]
Length = 496
Score = 1041 bits (2693), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MYQPSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRH 60
MYQPSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRH
Sbjct: 1 MYQPSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRH 60
Query: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPR 120
PPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPR
Sbjct: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPR 120
Query: 121 LPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFG 180
LPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFG
Sbjct: 121 LPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFG 180
Query: 181 PLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPR 240
PLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPR
Sbjct: 181 PLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPR 240
Query: 241 LPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYP 300
LPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYP
Sbjct: 241 LPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYP 300
Query: 301 GAWIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFI 360
GAWIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFI
Sbjct: 301 GAWIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFI 360
Query: 361 NEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVH 420
NEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVH
Sbjct: 361 NEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVH 420
Query: 421 LLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVA 480
LLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVA
Sbjct: 421 LLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVA 480
Query: 481 LGLSEPEPDLNLCSKP 496
LGLSEPEPDLNLCSKP
Sbjct: 481 LGLSEPEPDLNLCSKP 496
>gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo
sapiens]
Length = 315
Score = 622 bits (1605), Expect = e-178
Identities = 296/314 (94%), Positives = 299/314 (95%), Gaps = 7/314 (2%)
Query: 190 HAPSRDGASRT-------PSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 242
+ PSR A R + +DQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP
Sbjct: 2 YQPSRGAARRLGPCLRAYQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 61
Query: 243 TQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGA 302
TQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGA
Sbjct: 62 TQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGA 121
Query: 303 WIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFINE 362
WIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFINE
Sbjct: 122 WIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFINE 181
Query: 363 ILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVHLL 422
ILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVHLL
Sbjct: 182 ILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVHLL 241
Query: 423 FLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVALG 482
FLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVALG
Sbjct: 242 FLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVALG 301
Query: 483 LSEPEPDLNLCSKP 496
LSEPEPDLNLCSKP
Sbjct: 302 LSEPEPDLNLCSKP 315
Score = 54.3 bits (129), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 1 MYQPSRGAARRLGPCLRAYQARPQ 24
MYQPSRGAARRLGPCLRAYQARPQ
Sbjct: 1 MYQPSRGAARRLGPCLRAYQARPQ 24
>gi|238624193 hypothetical protein LOC221545 isoform 2 [Homo
sapiens]
Length = 181
Score = 332 bits (851), Expect = 5e-91
Identities = 158/160 (98%), Positives = 159/160 (99%)
Query: 337 RQELPKLFLQSHDYSLYSLDVEFINEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEV 396
R +LPKLFLQSHDYSLYSLDVEFINEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEV
Sbjct: 22 RPQLPKLFLQSHDYSLYSLDVEFINEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEV 81
Query: 397 LQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHR 456
LQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHR
Sbjct: 82 LQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHR 141
Query: 457 LDKLMPSHSPPTPVKKLLVGALVALGLSEPEPDLNLCSKP 496
LDKLMPSHSPPTPVKKLLVGALVALGLSEPEPDLNLCSKP
Sbjct: 142 LDKLMPSHSPPTPVKKLLVGALVALGLSEPEPDLNLCSKP 181
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MYQPSRGAARRLGPCLRAYQARPQV 25
MYQPSRGAARRLGPCLRAYQARPQ+
Sbjct: 1 MYQPSRGAARRLGPCLRAYQARPQL 25
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 60.1 bits (144), Expect = 5e-09
Identities = 66/198 (33%), Positives = 77/198 (38%), Gaps = 24/198 (12%)
Query: 8 AARRLGPCL--RAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLP 65
AAR G L + RP+ GG GR GE P+ G A G+A P P
Sbjct: 278 AARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPAC----GVGLARGTA-----PQPAS 328
Query: 66 TCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAG---RVCVAPDSPRLP 122
T AL R G G R A R + G R R G G A RV P + P
Sbjct: 329 TWALAARPRAG--GTWTSRFEAQRG-CAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRP 385
Query: 123 --VPRGDLKGRGREIRSPAAAPSRSSPAQTRPA----GRPQQPARLALGERSWQEGRPVC 176
+PR L+ + R P A PS + PA+ PA G P P G R E P
Sbjct: 386 RRLPRASLQEEPKR-RPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRA 444
Query: 177 TRFGPLRPGWQDGHAPSR 194
R GP GW G A R
Sbjct: 445 PRGGPASSGWHAGSAAGR 462
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 60.1 bits (144), Expect = 5e-09
Identities = 66/198 (33%), Positives = 77/198 (38%), Gaps = 24/198 (12%)
Query: 8 AARRLGPCL--RAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLP 65
AAR G L + RP+ GG GR GE P+ G A G+A P P
Sbjct: 278 AARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPAC----GVGLARGTA-----PQPAS 328
Query: 66 TCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAG---RVCVAPDSPRLP 122
T AL R G G R A R + G R R G G A RV P + P
Sbjct: 329 TWALAARPRAG--GTWTSRFEAQRG-CAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRP 385
Query: 123 --VPRGDLKGRGREIRSPAAAPSRSSPAQTRPA----GRPQQPARLALGERSWQEGRPVC 176
+PR L+ + R P A PS + PA+ PA G P P G R E P
Sbjct: 386 RRLPRASLQEEPKR-RPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRA 444
Query: 177 TRFGPLRPGWQDGHAPSR 194
R GP GW G A R
Sbjct: 445 PRGGPASSGWHAGSAAGR 462
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 57.8 bits (138), Expect = 2e-08
Identities = 87/313 (27%), Positives = 113/313 (36%), Gaps = 32/313 (10%)
Query: 18 AYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGV 77
A R + +G E G R P G +++ SA P P R
Sbjct: 175 AMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA------RRRP 228
Query: 78 AGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRS 137
+ GG + A R+ +S L + R G +A AP P P P+G + +R
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARS-GPSARGTPRAPAHPSQPKPKGL-----QALRP 282
Query: 138 PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGA 197
P P R A PA P + LA S + ++ P P + + A
Sbjct: 283 PQVTPPRKDAA---PALGPLSSSPLATPSPS----AALQSQAPPTLPATPHSSSLTCQLA 335
Query: 198 SRTPSGTEDQLYPG---TLPFPPLWPHSTTTTSPSSPLF-----WSPLPPRLP-TQRLPQ 248
+ P P TLP PP P S TTS SP + P PP P PQ
Sbjct: 336 TPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQ 395
Query: 249 VPP-LPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQ 307
PP L LP +QA S PP P P+ + L PP P P PF
Sbjct: 396 APPALALPPLQAPPSP-PASPPLSPLATPSPQAPNALAVHLLQAPFSPP-PSPPVQAPFS 453
Query: 308 VPGTAHPSP-ATP 319
P + SP ATP
Sbjct: 454 PPASPPVSPSATP 466
Score = 51.6 bits (122), Expect = 2e-06
Identities = 89/356 (25%), Positives = 113/356 (31%), Gaps = 52/356 (14%)
Query: 4 PSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPP 63
P G R G R +RP SG G R + S PV RA G+ + P P
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASG--RGERAPPAKNTSPGPVSSPGRASGTTR----PGP 128
Query: 64 LPTCALQ-------------RVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAG 110
L L+ + AG RR + + P + R G G
Sbjct: 129 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 111 RVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQ 170
AP + P G K PS ++ + G Q+PA +L +
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 171 EGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLP-----FPPLWPHSTT- 224
P R GP G AP+ + P G + P P P L P S++
Sbjct: 249 LSSP--ARSGPSARG--TPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSP 303
Query: 225 --TTSPSSPLFWSPLPPRLP------------TQRLPQVPPLPL--PQIQALSSAWVVLP 268
T SPS+ L S PP LP LP PP P P +Q L S P
Sbjct: 304 LATPSPSAAL-QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS-----P 357
Query: 269 PGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPSGDPS 324
P L S L S PP P P A P P P+
Sbjct: 358 PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPA 413
Score = 38.1 bits (87), Expect = 0.019
Identities = 70/274 (25%), Positives = 95/274 (34%), Gaps = 60/274 (21%)
Query: 118 SPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPA-------GRPQQPARLALGERSWQ 170
+P P P ++ SP +PS + P+Q P+ P PA + +
Sbjct: 438 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 497
Query: 171 EGR-PVCTRFGPLRPGWQDGHAPSRDGASRTPS----GTEDQLYPGTLPFPP--LWPHST 223
+ P PL+ AP A TP + +PG PF P P S
Sbjct: 498 PPQAPPPLAAPPLQLAKPPPQAPP---ALATPPLQALPSPPASFPGQAPFSPSASLPMSP 554
Query: 224 TTTSP--SSPLFWSPL------PPRLPTQRLPQVPPLPLPQIQA----LSSAWVVLPPGK 271
T P + P+ +PL PP PT + P+ PP P P L+ A PP
Sbjct: 555 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP 614
Query: 272 GEEGP-----GPEL--HSGCL----DGLRSLFEGP-------PCP-------YPGAWIPF 306
P GP+L HS + LR GP P P +P AW
Sbjct: 615 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 674
Query: 307 QVPGTAH------PSPATPSGDPSMEEHLSVMYE 334
P A P P P+ P + L +YE
Sbjct: 675 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYE 708
Score = 37.4 bits (85), Expect = 0.032
Identities = 93/321 (28%), Positives = 111/321 (34%), Gaps = 92/321 (28%)
Query: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRA---RTSVLPGLRAVRRGQGQAAGRVCVAPD 117
PPP T A RV LG AGA GR+ A RA + +P A R G ++AG
Sbjct: 35 PPPPVTPAALRV--LGAAGAVGRKPLAERAGGIGGATIPE-SAPRAGPTRSAG------T 85
Query: 118 SPRLPVPRGDLKGRGREI-------RSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQ 170
S R P R GRG P ++P R+S TRP Q+ R++ E +
Sbjct: 86 SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRAS-GTTRPGPLGQKGLRIS-AEETVA 143
Query: 171 EGRPVCTRFGPLRPGWQDGHAPSRDGASRTP-------------SGTEDQL---YPGTLP 214
G+ P R G RD + TP +GTE L P P
Sbjct: 144 RGK---ATEAPKRSALSAG--ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 215 FPP----------LWPHSTTTTSP----------------SSPLFWSPLPPRLP------ 242
PP HSTT SP S L S P P
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Query: 243 ---TQRLPQVPPLPLPQ-IQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCP 298
T R P P P P+ +QAL V P GP L S L P
Sbjct: 259 ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP-LSSSPL----------ATP 307
Query: 299 YPGAWIPFQVPGTAHPSPATP 319
P A + Q P T PATP
Sbjct: 308 SPSAALQSQAPPTL---PATP 325
Score = 37.4 bits (85), Expect = 0.032
Identities = 66/219 (30%), Positives = 79/219 (36%), Gaps = 29/219 (13%)
Query: 138 PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTR-----FGPLRPGWQDGHAP 192
P A P+ + P P P P L S Q + F P P AP
Sbjct: 394 PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP--PPSPPVQAP 451
Query: 193 SRDGASR--TPSGTEDQLYPGTLPFPPLW-PHSTTTTSPSSPLFWSP--LPPRL--PTQR 245
AS +PS T P +L PPL P S + P SP P PP L P +
Sbjct: 452 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 511
Query: 246 L----PQVPP-LPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYP 300
L PQ PP L P +QAL S PG+ P L + L PP P
Sbjct: 512 LAKPPPQAPPALATPPLQALPSPPASF-PGQAPFSPSASL------PMSPLATPPPQAPP 564
Query: 301 GAWIP-FQVPGT--AHPSPATPSGDPSMEEHLSVMYERL 336
P QVP + A P+ P P+ SV RL
Sbjct: 565 VLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 603
Score = 31.6 bits (70), Expect = 1.7
Identities = 60/218 (27%), Positives = 74/218 (33%), Gaps = 30/218 (13%)
Query: 115 APDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRP 174
AP SP +P L P A P ++P P P P A R P
Sbjct: 542 APFSPSASLPMSPLA-----TPPPQAPPVLAAPLLQVPPSPPASPTLQA--PRRPPTPGP 594
Query: 175 VCTRFGP-LRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLF 233
+ GP L G P SR+PS T L P L HS++ TS L
Sbjct: 595 DTSVSGPRLTLALAPGPPPP---PSRSPSST--------LSGPDLAGHSSSATSTPEELR 643
Query: 234 WSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPG------PELHSGCLDG 287
P P P L + + PP PG P G DG
Sbjct: 644 GYDSGPEGGAAASPP-PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADG 702
Query: 288 LRSLFE--GPPC--PYPGAWIPFQVPGTAHPSPATPSG 321
L +++E GP P PGA P PGT+ A +G
Sbjct: 703 LCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 740
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 55.1 bits (131), Expect = 1e-07
Identities = 85/310 (27%), Positives = 110/310 (35%), Gaps = 56/310 (18%)
Query: 18 AYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGV 77
A R + +G E G R P G +++ SA P P R
Sbjct: 166 AMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA------RRRP 219
Query: 78 AGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRS 137
+ GG + A R+ +S L + R G +A AP P P P+G + +R
Sbjct: 220 SAGGGLQRPASRSLSSSATPLSSPARS-GPSARGTPRAPAHPSQPKPKGL-----QALRP 273
Query: 138 PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGA 197
P P P++ A ALG S P+ T +PS +
Sbjct: 274 PQVTP-------------PRKDAAPALGPLS---SSPLATP------------SPSAPPS 305
Query: 198 SRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLF-----WSPLPPRLP-TQRLPQVPP 251
P + TLP PP P S TTS SP + P PP P PQ PP
Sbjct: 306 PSAPPSLQ------TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP 359
Query: 252 -LPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPG 310
L LP +QA S PP P P+ + L PP P P PF P
Sbjct: 360 ALALPPLQAPPSP-PASPPLSPLATPSPQAPNALAVHLLQAPFSPP-PSPPVQAPFSPPA 417
Query: 311 TAHPSP-ATP 319
+ SP ATP
Sbjct: 418 SPPVSPSATP 427
Score = 38.5 bits (88), Expect = 0.014
Identities = 96/394 (24%), Positives = 131/394 (33%), Gaps = 66/394 (16%)
Query: 4 PSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGER---PSSKPVRGAERALGSAQAQRH 60
P + AA LGP + A P S + P + P A +LGS Q
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 338
Query: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRARTS--VLPGLRAVRRGQGQAAGRVCV-APD 117
LP+ L + +A S P L + QA + V
Sbjct: 339 HSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 398
Query: 118 SPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPA-------GRPQQPARLALGERSWQ 170
+P P P ++ SP +PS + P+Q P+ P PA + +
Sbjct: 399 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 458
Query: 171 EGR-PVCTRFGPLRPGWQDGHAPSRDGASRTPS----GTEDQLYPGTLPFPP--LWPHST 223
+ P PL+ AP A TP + +PG PF P P S
Sbjct: 459 PPQAPPPLAAPPLQLAKPPPQAPP---ALATPPLQALPSPPASFPGQAPFSPSASLPMSP 515
Query: 224 TTTSP--SSPLFWSPL------PPRLPTQRLPQVPPLPLPQIQA----LSSAWVVLPPGK 271
T P + P+ +PL PP PT + P+ PP P P L+ A PP
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP 575
Query: 272 GEEGP-----GPEL--HSGCL----DGLRSLFEGP-------PCP-------YPGAWIPF 306
P GP+L HS + LR GP P P +P AW
Sbjct: 576 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 635
Query: 307 QVPGTAH------PSPATPSGDPSMEEHLSVMYE 334
P A P P P+ P + L +YE
Sbjct: 636 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYE 669
Score = 38.1 bits (87), Expect = 0.019
Identities = 94/360 (26%), Positives = 118/360 (32%), Gaps = 50/360 (13%)
Query: 18 AYQARPQVSGGEE---GGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRV-- 72
A + RP GG + P S P R A G+ +A HP LQ +
Sbjct: 214 AARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRP 273
Query: 73 -----DRLGVAGAGGRRCRACRARTS--------VLPGLRAVRRGQGQAAGRVCVAPDSP 119
R A A G + A S P L+ + + + SP
Sbjct: 274 PQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSP 333
Query: 120 RLPVPRGDLKGRGREIRS---PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVC 176
L L + P A P+ + P P P P L S Q +
Sbjct: 334 TLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 177 TR-----FGPLRPGWQDGHAPSRDGASR--TPSGTEDQLYPGTLPFPPLW-PHSTTTTSP 228
F P P AP AS +PS T P +L PPL P S + P
Sbjct: 394 VHLLQAPFSP--PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 451
Query: 229 SSPLFWSP--LPPRL--PTQRL----PQVPP-LPLPQIQALSSAWVVLPPGKGEEGPGPE 279
SP P PP L P +L PQ PP L P +QAL S PG+ P
Sbjct: 452 MSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF-PGQAPFSPSAS 510
Query: 280 LHSGCLDGLRSLFEGPPCPYPGAWIP-FQVPGT--AHPSPATPSGDPSMEEHLSVMYERL 336
L + L PP P P QVP + A P+ P P+ SV RL
Sbjct: 511 L------PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 564
Score = 34.7 bits (78), Expect = 0.21
Identities = 85/311 (27%), Positives = 108/311 (34%), Gaps = 54/311 (17%)
Query: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRAR-------TSVLPGLRAVRRGQGQAAGRVC 113
PPP T A RV LG AGA GR+ A RA P R + A+GR
Sbjct: 35 PPPPVTPAALRV--LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGE 92
Query: 114 VAPDSPRLPVPRGDLKGRGREIRSPAAAP-----SRSSPAQTRPAGR-PQQPARLAL--G 165
AP P G + GR + P R S +T G+ + P R AL G
Sbjct: 93 RAP--PAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 150
Query: 166 ERSWQEG--------------RPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPG 211
R G R T G RP P +G ++ S + +
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASE--HST 208
Query: 212 TLPFPPL-----------WPHSTTTTSPSSPLFWSPL---PPRLPTQRLPQVPPLPLPQ- 256
T P P P S + +S ++PL SP P T R P P P P+
Sbjct: 209 TEPSPAARRRPSAGGGLQRPASRSLSSSATPLS-SPARSGPSARGTPRAPAHPSQPKPKG 267
Query: 257 IQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSP 316
+QAL V P GP S S P P +P P PS
Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLP--SPPATPPSQ 325
Query: 317 ATPS-GDPSME 326
AT S G P+++
Sbjct: 326 ATTSLGSPTLQ 336
Score = 31.6 bits (70), Expect = 1.7
Identities = 60/218 (27%), Positives = 74/218 (33%), Gaps = 30/218 (13%)
Query: 115 APDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRP 174
AP SP +P L P A P ++P P P P A R P
Sbjct: 503 APFSPSASLPMSPLA-----TPPPQAPPVLAAPLLQVPPSPPASPTLQA--PRRPPTPGP 555
Query: 175 VCTRFGP-LRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLF 233
+ GP L G P SR+PS T L P L HS++ TS L
Sbjct: 556 DTSVSGPRLTLALAPGPPPP---PSRSPSST--------LSGPDLAGHSSSATSTPEELR 604
Query: 234 WSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPG------PELHSGCLDG 287
P P P L + + PP PG P G DG
Sbjct: 605 GYDSGPEGGAAASPP-PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADG 663
Query: 288 LRSLFE--GPPC--PYPGAWIPFQVPGTAHPSPATPSG 321
L +++E GP P PGA P PGT+ A +G
Sbjct: 664 LCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 701
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 53.1 bits (126), Expect = 6e-07
Identities = 64/222 (28%), Positives = 75/222 (33%), Gaps = 32/222 (14%)
Query: 113 CVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEG 172
C P P LP G + P P T P+ QP L +G
Sbjct: 853 CNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPL--------QG 904
Query: 173 RPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGT-LPFPPLWPHSTTTTSPSSP 231
+ P PG P GA P PG +P PP P + P P
Sbjct: 905 TEMLPPPPPPLPGAGIPPPPPLPGAGILPLPP----LPGAGIPPPPPLPGAAIPPPPPLP 960
Query: 232 LFWSPLPPRLPTQRLPQVPPLP---LPQIQALSSAWVVLP---PGKGEEGPGPELHSGCL 285
PLPP LP +P PPLP +P L A + P PG G P P +G
Sbjct: 961 GAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI- 1019
Query: 286 DGLRSLFEGPPCPYPGAWIPFQVP----GTAHPSPATPSGDP 323
PP P PGA IP P G P P +G P
Sbjct: 1020 --------PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1053
Score = 44.3 bits (103), Expect = 3e-04
Identities = 40/121 (33%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 210 PGT-LPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP---LPQIQALSSAWV 265
PG +P PP P + P P P PP LP +P PPLP +P L +
Sbjct: 1125 PGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGI 1184
Query: 266 VLP---PGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPSGD 322
P PG G P P +G PP P PG IP P A P P +G
Sbjct: 1185 PPPPPLPGVGIPPPPPLPGAGI---------PPPPPLPGMGIP---PAPAPPLPPPGTGI 1232
Query: 323 P 323
P
Sbjct: 1233 P 1233
Score = 43.9 bits (102), Expect = 3e-04
Identities = 43/127 (33%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 210 PGT-LPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP---LPQIQALSSAWV 265
PG +P PP P + P P P PP LP +P PPLP +P L A +
Sbjct: 1015 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1074
Query: 266 VLP---PGKGEEGPGPELHSGC--LDGLRSLFEGPPCPYPGAWIPFQVP----GTAHPSP 316
P PG G P P +G L + PP P PGA IP P G P P
Sbjct: 1075 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1134
Query: 317 ATPSGDP 323
+G P
Sbjct: 1135 LPGAGIP 1141
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/116 (34%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 210 PGT-LPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP---LPQIQALSSAWV 265
PG +P PP P + P P P PP LP +P PPLP +P L A +
Sbjct: 1037 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1096
Query: 266 VLPP---GKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWI--PFQVPGTAHPSP 316
PP G G P P +G PP P PGA I P +PG P P
Sbjct: 1097 PPPPPLPGVGIPPPPPLPGAGI---------PPPPPLPGAGIPPPPPLPGAGIPPP 1143
Score = 43.9 bits (102), Expect = 3e-04
Identities = 39/115 (33%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 210 PGT-LPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP---LPQIQALSSAWV 265
PG +P PP P + P P P PP LP +P PPLP +P L A +
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1140
Query: 266 VLPPGKGEEG--PGPELHSGCLDGLRSLFEGPPCPYPGAWI--PFQVPGTAHPSP 316
PP G P P L + PP P PGA I P +PG P P
Sbjct: 1141 PPPPPLPRVGIPPPPPLPGAGIP--------PPPPLPGAGIPPPPPLPGVGIPPP 1187
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 50.1 bits (118), Expect = 5e-06
Identities = 84/303 (27%), Positives = 103/303 (33%), Gaps = 38/303 (12%)
Query: 40 PSSKPVR---GAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLP 96
P P+R G R G +A P + R R G G RR R R LP
Sbjct: 28 PPRLPIRMTWGIPRESGIQKAHTRSPAQYSQTRLRRRRQGAVIVGRRRACPGRGRGG-LP 86
Query: 97 GLRAVRRGQGQAAGRVCVAPDSPRLPVP-------RGDLKGRGREIRSPAAAPSRSSPAQ 149
G A+ G Q R P R P+ R L G R P A + PA
Sbjct: 87 GAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPAS 146
Query: 150 TRPAGRPQQP---ARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTED 206
P RP RL L G P P W+ G R + P
Sbjct: 147 EAPGLRPDSARTRLRLRLASARLPRGLPP----APAAGLWRAGCTRLRPLLLQPP----P 198
Query: 207 QLYPGTLPFPPLWPHSTTTTSPS---SPLFWSPLPP--RLPTQRLPQVPPLPLPQIQALS 261
L PG P + H+ T + P+ +P P PP R P+ P L +A +
Sbjct: 199 MLSPGLAQSPGVELHARTLSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLAEAHT 258
Query: 262 SAWVVLPPGKGEEGPGPELHSGCLDGLRSLFE--GPPCPYPGAWIPFQVPGTAHP-SPAT 318
A + G GE PGP + G + SL PP P P VP TA SP
Sbjct: 259 RA-LTPARGGGEGDPGP-IVGGRPENEDSLASQTSPPAP------PAPVPSTARARSPGA 310
Query: 319 PSG 321
G
Sbjct: 311 RRG 313
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 49.3 bits (116), Expect = 8e-06
Identities = 61/221 (27%), Positives = 73/221 (33%), Gaps = 48/221 (21%)
Query: 28 GEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPL-------PTCALQRVDRLGVA-- 78
G GGR G P KP + R A A PP P A R G A
Sbjct: 322 GAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAG 381
Query: 79 GAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLK--------- 129
GAG RR R R R S RRG+ + PR PRG +
Sbjct: 382 GAGRRRRRRRRRRRSRSSASAPRRRGRRR-----------PRPAPPRGSSRSLSRARSSS 430
Query: 130 --GRGREIRSPAAAP------------SRSSPAQTRPAGRPQQPARLALGERSWQEGRPV 175
G GR P P ++ P + RPA P A G R EG+
Sbjct: 431 DSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPG--AHGRRGGPEGKSS 488
Query: 176 CTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFP 216
GP W +PS+ SR+ S + P P P
Sbjct: 489 SRSPGPHPRSWSSSRSPSK---SRSRSAEKRPHSPSRSPSP 526
Score = 40.4 bits (93), Expect = 0.004
Identities = 53/191 (27%), Positives = 71/191 (37%), Gaps = 15/191 (7%)
Query: 7 GAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRH------ 60
GA RR R ++R S GRR RP P RG+ R+L A++
Sbjct: 382 GAGRRRRRRRRRRRSRSSASAPRRRGRR----RPRPAPPRGSSRSLSRARSSSDSGSGRG 437
Query: 61 -PPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRG-QGQAAGRVCVAPDS 118
P P P +R A R RA A TS PG R G +G+++ R P
Sbjct: 438 APGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSR-SPGPHP 496
Query: 119 PRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQ-PARLALGERSWQEGRPVCT 177
R K R R +PSR SP+ +P R + R E R
Sbjct: 497 RSWSSSRSPSKSRSRSAEKRPHSPSR-SPSPKKPLSRDKDGEGRARHSEAEATRARRRSR 555
Query: 178 RFGPLRPGWQD 188
+ P+R +D
Sbjct: 556 SYSPIRKRRRD 566
Score = 30.8 bits (68), Expect = 3.0
Identities = 57/251 (22%), Positives = 88/251 (35%), Gaps = 63/251 (25%)
Query: 33 RRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACRART 92
++GG R K +E + GS+ R + R DR + +G RR R R+R+
Sbjct: 174 KKGGHRRSRKKRRLESECSCGSSSPLRKKKK--SVKKHRRDR---SDSGSRRKRRHRSRS 228
Query: 93 SVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRP 152
S + R+ + + R P + GR S S SP+ +
Sbjct: 229 S-----KCKRKEKNKEKKR------------PHTESPGRRSHRHSSG---SSHSPSLSSH 268
Query: 153 AGRPQQPARLALGERSWQEGRPVCTRFG-----PLRPGWQDGHAPSRDGASRTPSGTEDQ 207
+ P+RL+ R EGR ++ P G +P R+G S SG
Sbjct: 269 YSDSRSPSRLSPKHRD--EGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGA--- 323
Query: 208 LYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVL 267
H S SP P P P P+++ ++A
Sbjct: 324 -------------HGGRPGSAHSP---------------PDKPSSPSPRVRDKAAAAAPT 355
Query: 268 PPGKGEEGPGP 278
PP +G+E P P
Sbjct: 356 PPARGKESPSP 366
>gi|164565408 common-site lymphoma/leukemia guanine nucleotide
exchange factor [Homo sapiens]
Length = 1386
Score = 49.3 bits (116), Expect = 8e-06
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 19/140 (13%)
Query: 165 GERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRT----PSGTEDQLYPGTLPFPPLWP 220
G R Q PVC++ P++P G + G T P D PGT P P
Sbjct: 1060 GSRDVQGPDPVCSQ--PIQPLSWHGSSLDPQGPGDTLPPLPCHLPDLQIPGTSPLPAHGS 1117
Query: 221 HSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPEL 280
H ++PL L LP ++P PLPLPQ+ L+ WV P ++G P++
Sbjct: 1118 HLDHRIPANAPL---SLSQELPDTQVPATTPLPLPQV--LTDIWVQALPTSPKQGSLPDI 1172
Query: 281 HSGCLDGLRSLFEGPPCPYP 300
PP P P
Sbjct: 1173 QGPA--------AAPPLPEP 1184
Score = 30.8 bits (68), Expect = 3.0
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 96 PGLRAVRRGQGQAAGRVC---VAPDSPRLPVPRG-----DLKGRGREIRSPAAAPSRSSP 147
P L RRG+ G VC AP +P + PRG L G E PA P+ +
Sbjct: 15 PSLGCGRRGEVCDCGTVCETRTAPAAPTMASPRGSGSSTSLSTVGSE-GDPAPGPTPACS 73
Query: 148 AQTRPAGRPQQPARLAL 164
A +RP P P RL L
Sbjct: 74 A-SRPEPLPGPPIRLHL 89
Score = 30.8 bits (68), Expect = 3.0
Identities = 31/115 (26%), Positives = 39/115 (33%), Gaps = 18/115 (15%)
Query: 5 SRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPL 64
S+ ARR GP GG RG SS P A S Q PPP
Sbjct: 1287 SQSLARRQGP-----------GGGAPAASRGSW---SSAPTSRAS----SPPPQPQPPPP 1328
Query: 65 PTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSP 119
P L + + GG R R +A+ + + R APD+P
Sbjct: 1329 PARRLSYATTVNIHVGGGGRLRPAKAQVRLNHPALLASTQESMGLHRAQGAPDAP 1383
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 48.5 bits (114), Expect = 1e-05
Identities = 83/345 (24%), Positives = 111/345 (32%), Gaps = 63/345 (18%)
Query: 3 QPSRGAARRLGPCLRAYQARPQVSGGEEGGRR-----------GGGERPSSKPVRGAERA 51
+P G C RA V G G + GGG R + +P G
Sbjct: 971 EPEDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEG---- 1026
Query: 52 LGSAQAQRHPPPLPTC--------ALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAV-R 102
HP P P L V G GG R + + GL A R
Sbjct: 1027 --------HPTPRPASPEPGRVATVLASVKHKEAIGPGGEVVNRRRTLSGPVTGLLATAR 1078
Query: 103 RGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRP--QQPA 160
RG G++A D PRG KG P A S+ + R + Q+
Sbjct: 1079 RGPGESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAKQNQQENV 1138
Query: 161 RLALGERSWQEGRPVCTR--FGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPL 218
+ L E + RP GP P + R P+ +Q P LP PP
Sbjct: 1139 KFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPAS--EQAGPPELPPPP- 1195
Query: 219 WPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGP 278
P+ P P L +PPLP P+ +A A + P P P
Sbjct: 1196 --------PPAEP----------PPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVP 1237
Query: 279 ELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPSGDP 323
+L + + P P PG+ + GT P P +P P
Sbjct: 1238 KLQGSPTPTSKKV----PLPGPGSPEVKRAHGT--PPPVSPKPPP 1276
Score = 46.6 bits (109), Expect = 5e-05
Identities = 79/299 (26%), Positives = 96/299 (32%), Gaps = 67/299 (22%)
Query: 46 RGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACRART----SVLPGLRAV 101
R A ++L + PPP PT A C++ + T + L+A
Sbjct: 620 RKAPQSLEVMAIESPPPPEPTPA---------------DCQSPKMTTFQDSELSDELQAA 664
Query: 102 RRGQGQAAGRVCVAPDSPRLPVPRG------DLKGRGREIRSPAAAPSRSSPAQTRPAGR 155
G + G P S P PR L GR R + S P + P R
Sbjct: 665 MTGPAEV-GPTTEKPSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSR 723
Query: 156 PQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPF 215
Q E EG T RPG + GH+ R P L PGT F
Sbjct: 724 SQ--------EYLLDEGPAPGTPPREARPG-RHGHSIKRASVPPVPGKPRQVLPPGTSHF 774
Query: 216 PPLWPHSTTTTSPSSPLFW-------------SPLPPRLPTQRLPQVPPLPLPQIQALSS 262
P P + T T P SP P P LP P + P LPQ
Sbjct: 775 TP--PQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTERP-MSPRSLPQSPTHRG 831
Query: 263 AWVVLP-PGKGEEGPGPELHSGCLDGLRSLFEGP-PCPYPGAWIPFQVPGTAHPSPATP 319
VLP P +GE GP GP P P P A +P A P P
Sbjct: 832 FAYVLPQPVEGEVGPAA--------------PGPAPPPVPTAVPTLCLPPEADAEPGRP 876
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 47.8 bits (112), Expect = 2e-05
Identities = 66/215 (30%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 108 AAGRVCVAPDSP-RLPVPRGD-LKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALG 165
+A + V P P R PVP L G I P AP S+ P P P L G
Sbjct: 557 SAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP-LPGG 615
Query: 166 ERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTT 225
VC P PG S P + D T+P PP P
Sbjct: 616 ---------VCISSPPSLPGGT--------AISPPPPLSGD----ATIPPPPPLPEGVGI 654
Query: 226 TSPSSPLFWSPLPPRLP---TQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHS 282
SPSS + +PP P + R+P PP PLP + LP G P P L
Sbjct: 655 PSPSSLPGGTAIPPPPPLPGSARIPPPPP-PLPGSAGIPPPPPPLPGEAGMPPPPPPLPG 713
Query: 283 GCLDGLRSLFEGPPCPYPGA-WIPFQVPGTAHPSP 316
G G+ PP P+PG IP PG P P
Sbjct: 714 G--PGI-----PPPPPFPGGPGIPPPPPGMGMPPP 741
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 47.8 bits (112), Expect = 2e-05
Identities = 66/215 (30%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 108 AAGRVCVAPDSP-RLPVPRGD-LKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALG 165
+A + V P P R PVP L G I P AP S+ P P P L G
Sbjct: 566 SAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP-LPGG 624
Query: 166 ERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTT 225
VC P PG S P + D T+P PP P
Sbjct: 625 ---------VCISSPPSLPGGT--------AISPPPPLSGD----ATIPPPPPLPEGVGI 663
Query: 226 TSPSSPLFWSPLPPRLP---TQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHS 282
SPSS + +PP P + R+P PP PLP + LP G P P L
Sbjct: 664 PSPSSLPGGTAIPPPPPLPGSARIPPPPP-PLPGSAGIPPPPPPLPGEAGMPPPPPPLPG 722
Query: 283 GCLDGLRSLFEGPPCPYPGA-WIPFQVPGTAHPSP 316
G G+ PP P+PG IP PG P P
Sbjct: 723 G--PGI-----PPPPPFPGGPGIPPPPPGMGMPPP 750
>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
sapiens]
Length = 1074
Score = 45.4 bits (106), Expect = 1e-04
Identities = 68/262 (25%), Positives = 92/262 (35%), Gaps = 78/262 (29%)
Query: 103 RGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGR------- 155
RGQG R +P++ LP+ R +GRG +R PA+ R + R A R
Sbjct: 98 RGQGP---RPQTSPET--LPLYRTQSRGRGGPLRGPASHLGREETQEIRAARRSRLRDPI 152
Query: 156 ----------------------PQQPARLAL------GERSWQEGRPVCTRFG------- 180
P+ P R L GE + P F
Sbjct: 153 KPGMFGYGRVPFALPLHRNRRHPRSPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQT 212
Query: 181 PLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPH---STTTTSPSSP------ 231
L P H PS +P + ++ P T P PL H + T P SP
Sbjct: 213 ELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRP-APLRHHPRAQASGTEPPSPTHSLGE 271
Query: 232 --LFWSPLPPRLPTQR---LPQVP---PLPLPQIQALSSAWVVLPPGKGEEGPGPELHSG 283
F + PR P+ + PQV P P P + P G+G++G GP G
Sbjct: 272 GGFFRASPQPRRPSSQGWASPQVAGRRPDPFPSV----------PRGRGQQGQGPWGTGG 321
Query: 284 CLDGLRSLFEGPPCPYPGAWIP 305
G R P +PGAW+P
Sbjct: 322 TPHGPRL---EPDPQHPGAWLP 340
>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
sapiens]
Length = 877
Score = 45.4 bits (106), Expect = 1e-04
Identities = 68/262 (25%), Positives = 92/262 (35%), Gaps = 78/262 (29%)
Query: 103 RGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGR------- 155
RGQG R +P++ LP+ R +GRG +R PA+ R + R A R
Sbjct: 98 RGQGP---RPQTSPET--LPLYRTQSRGRGGPLRGPASHLGREETQEIRAARRSRLRDPI 152
Query: 156 ----------------------PQQPARLAL------GERSWQEGRPVCTRFG------- 180
P+ P R L GE + P F
Sbjct: 153 KPGMFGYGRVPFALPLHRNRRHPRSPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQT 212
Query: 181 PLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPH---STTTTSPSSP------ 231
L P H PS +P + ++ P T P PL H + T P SP
Sbjct: 213 ELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRP-APLRHHPRAQASGTEPPSPTHSLGE 271
Query: 232 --LFWSPLPPRLPTQR---LPQVP---PLPLPQIQALSSAWVVLPPGKGEEGPGPELHSG 283
F + PR P+ + PQV P P P + P G+G++G GP G
Sbjct: 272 GGFFRASPQPRRPSSQGWASPQVAGRRPDPFPSV----------PRGRGQQGQGPWGTGG 321
Query: 284 CLDGLRSLFEGPPCPYPGAWIP 305
G R P +PGAW+P
Sbjct: 322 TPHGPRL---EPDPQHPGAWLP 340
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 45.4 bits (106), Expect = 1e-04
Identities = 58/228 (25%), Positives = 77/228 (33%), Gaps = 33/228 (14%)
Query: 30 EGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACR 89
+GG + G P KP + +Q+ R PP P G GG + +
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQ---------GPPPQGGNQPQG-- 255
Query: 90 ARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSP-A 148
PG QG + P P+ P P+G K R RSP P P
Sbjct: 256 --PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS--RSPPGKPQGPPPQG 311
Query: 149 QTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAP---SRDGASRTPSGTE 205
+P G P P + G +P GP PG G P S+ ++R+P G
Sbjct: 312 GNQPQGPPPPPGK-PQGPPPQGGNKPQ----GPPPPGKPQGPPPQGGSKSRSARSPPGK- 365
Query: 206 DQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP 253
P P P P +P P+ P PQ PP P
Sbjct: 366 --------PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 405
Score = 44.3 bits (103), Expect = 3e-04
Identities = 78/304 (25%), Positives = 105/304 (34%), Gaps = 52/304 (17%)
Query: 30 EGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACR 89
+GG + G P KP + +++ R PP P G GG + +
Sbjct: 145 QGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQ---------GPPPQGGNQPQG-- 193
Query: 90 ARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSP-A 148
PG QG + P P+ P P+GD + + RSP P P
Sbjct: 194 --PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD--NKSQSARSPPGKPQGPPPQG 249
Query: 149 QTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAP---SRDGASRTPSG-- 203
+P G P P + G +P GP PG G P S+ +SR+P G
Sbjct: 250 GNQPQGPPPPPGK-PQGPPPQGGNKPQ----GPPPPGKPQGPPPQGGSKSRSSRSPPGKP 304
Query: 204 ----TEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQA 259
+ P P PP P + P P PP PQ PP PQ +
Sbjct: 305 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP--QGPPPP-----GKPQGPP---PQGGS 354
Query: 260 LSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPS--PA 317
S + PPGK + P E ++ +GPP P G Q P P P
Sbjct: 355 KSRS-ARSPPGKPQGPPQQEGNNP---------QGPPPPAGGNPQQPQAPPAGQPQGPPR 404
Query: 318 TPSG 321
P G
Sbjct: 405 PPQG 408
Score = 33.5 bits (75), Expect = 0.46
Identities = 44/165 (26%), Positives = 57/165 (34%), Gaps = 20/165 (12%)
Query: 30 EGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACR 89
+GG + G P KP + +++ R PP P G GG + +
Sbjct: 269 QGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ---------GPPPQGGNQPQG-- 317
Query: 90 ARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQ 149
PG QG + P P+ P P+G K R RSP P P Q
Sbjct: 318 --PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSA--RSPPGKPQ--GPPQ 371
Query: 150 TRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSR 194
+ PQ P A G + P GP RP G PSR
Sbjct: 372 -QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP--PQGGRPSR 413
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 45.4 bits (106), Expect = 1e-04
Identities = 61/249 (24%), Positives = 78/249 (31%), Gaps = 28/249 (11%)
Query: 79 GAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAP----DSPRLPVPRGDLKGRGRE 134
G GG R L R+ G G R + P P+ P+P ++
Sbjct: 12 GGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPP--PHQQQ 69
Query: 135 IRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSR 194
+ P P P +P PQ + +PV + PG S
Sbjct: 70 QQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASS 129
Query: 195 DGASRTP--SGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPL 252
TP SG PG P P P + T+ P +P PP P+ +P PP
Sbjct: 130 SAPPATPPTSGAPPGSGPGPTPTP---PPAVTSAPPGAP------PPTPPSSGVPTTPP- 179
Query: 253 PLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTA 312
A PP GPGP G G + P P PG PG
Sbjct: 180 ---------QAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPG-G 229
Query: 313 HPSPATPSG 321
HP P G
Sbjct: 230 HPKPPHRGG 238
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.7 bits (104), Expect = 2e-04
Identities = 87/337 (25%), Positives = 114/337 (33%), Gaps = 58/337 (17%)
Query: 15 CLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPP------PLPTCA 68
C R P G E RR +R AL SA Q+ P P P
Sbjct: 57 CGRGPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSG 116
Query: 69 LQRVDR--LGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRG 126
++ R +G++ A GR AC AR G+R V +P P P+P
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGAC-ARAK---GIRLVNP-----------SPPRPPEPIPAS 161
Query: 127 DLKGRGREIRSPAAA----PSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPL 182
G R P + P + + R P+ R+A + P C L
Sbjct: 162 AAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGL 221
Query: 183 RPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPF----PPLWPHSTTTTSPSSPL--FWSP 236
HA R T + P T F P P T++S S+PL FWSP
Sbjct: 222 SVPTPPEHA-----GGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSP 276
Query: 237 LPPRLPTQR-LPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGP 295
L R P+ R P L L ++ PP G SG R+L P
Sbjct: 277 L--RNPSPRPAPACGELRLGRLS---------PPRADTGGSSSGGCSGPDSKHRTL---P 322
Query: 296 PCPYPGAWIPFQVPGTAHPS-----PATPSGDPSMEE 327
P P AW PG +P+ P G PS +
Sbjct: 323 APPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRD 359
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.7 bits (104), Expect = 2e-04
Identities = 87/337 (25%), Positives = 114/337 (33%), Gaps = 58/337 (17%)
Query: 15 CLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPP------PLPTCA 68
C R P G E RR +R AL SA Q+ P P P
Sbjct: 57 CGRGPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSG 116
Query: 69 LQRVDR--LGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRG 126
++ R +G++ A GR AC AR G+R V +P P P+P
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGAC-ARAK---GIRLVNP-----------SPPRPPEPIPAS 161
Query: 127 DLKGRGREIRSPAAA----PSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPL 182
G R P + P + + R P+ R+A + P C L
Sbjct: 162 AAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGL 221
Query: 183 RPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPF----PPLWPHSTTTTSPSSPL--FWSP 236
HA R T + P T F P P T++S S+PL FWSP
Sbjct: 222 SVPTPPEHA-----GGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSP 276
Query: 237 LPPRLPTQR-LPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGP 295
L R P+ R P L L ++ PP G SG R+L P
Sbjct: 277 L--RNPSPRPAPACGELRLGRLS---------PPRADTGGSSSGGCSGPDSKHRTL---P 322
Query: 296 PCPYPGAWIPFQVPGTAHPS-----PATPSGDPSMEE 327
P P AW PG +P+ P G PS +
Sbjct: 323 APPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRD 359
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.7 bits (104), Expect = 2e-04
Identities = 87/337 (25%), Positives = 114/337 (33%), Gaps = 58/337 (17%)
Query: 15 CLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPP------PLPTCA 68
C R P G E RR +R AL SA Q+ P P P
Sbjct: 57 CGRGPAHSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSG 116
Query: 69 LQRVDR--LGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRG 126
++ R +G++ A GR AC AR G+R V +P P P+P
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGAC-ARAK---GIRLVNP-----------SPPRPPEPIPAS 161
Query: 127 DLKGRGREIRSPAAA----PSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPL 182
G R P + P + + R P+ R+A + P C L
Sbjct: 162 AAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGL 221
Query: 183 RPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPF----PPLWPHSTTTTSPSSPL--FWSP 236
HA R T + P T F P P T++S S+PL FWSP
Sbjct: 222 SVPTPPEHA-----GGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSP 276
Query: 237 LPPRLPTQR-LPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGP 295
L R P+ R P L L ++ PP G SG R+L P
Sbjct: 277 L--RNPSPRPAPACGELRLGRLS---------PPRADTGGSSSGGCSGPDSKHRTL---P 322
Query: 296 PCPYPGAWIPFQVPGTAHPS-----PATPSGDPSMEE 327
P P AW PG +P+ P G PS +
Sbjct: 323 APPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRD 359
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 44.3 bits (103), Expect = 3e-04
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 11/139 (7%)
Query: 188 DGHAPSRDGASRT--PSGTEDQ-LYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQ 244
+G A G+SR P G + +PG +P +P P P PPR P
Sbjct: 183 EGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG 242
Query: 245 RL-PQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDG---LRSLFEGPPCPYP 300
P PP P P Q L + PP +G+ P P L G G L L GPP P P
Sbjct: 243 PPGPPGPPGPPPPGQVLPPP-LAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP 301
Query: 301 GAWIPFQVPGTAHPSPATP 319
G P PG P P
Sbjct: 302 GYGPP---PGPPPPQQGPP 317
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.3 bits (103), Expect = 3e-04
Identities = 81/326 (24%), Positives = 112/326 (34%), Gaps = 49/326 (15%)
Query: 29 EEGGRRGGGERPSSKPVRGAERALG------------SAQAQRHPP-----PLPTCALQR 71
E G GG P S P G R+ G S + +R PP P P + R
Sbjct: 60 ERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGR 119
Query: 72 VDRLGVAGAGGRRCRACRARTSVLPG--LRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLK 129
G G++ A +V G A +R A R + +P P P +
Sbjct: 120 ASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR 179
Query: 130 GR--GREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQ 187
R G E+ P APS A+ RP + + + E S E P R P G
Sbjct: 180 SRAAGTEVGLPRPAPS----ARPRPPTEGPRKSVSSASEHSTTEPSPAARR-RPSAGGGL 234
Query: 188 DGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLP 247
A +S TP + + P T +P+ P P P L R P
Sbjct: 235 QRPASRSLSSSATPLSSPARSGPSA---------RGTPRAPAHPS--QPKPKGLQALRPP 283
Query: 248 QVPPL---PLPQIQALSSAWVVLPPGKGEEG-PGPELHSGCLDGLRSLFEGPPCPYPGAW 303
QV P P + LSS+ + P G + P P + +L PP P
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP--- 340
Query: 304 IPFQVPGTAHPS-----PATPSGDPS 324
+P P + P P+ P+ PS
Sbjct: 341 LPLAPPSPSAPPSLQTLPSPPATPPS 366
Score = 43.9 bits (102), Expect = 3e-04
Identities = 80/334 (23%), Positives = 107/334 (32%), Gaps = 53/334 (15%)
Query: 4 PSRGAARRLGPCLRAYQARPQVSGGEEGGRRGGGERPSSKPVRGAERALGSAQAQRHPPP 63
P G R G R +RP SG G R + S PV RA G+ + P P
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASG--RGERAPPAKNTSPGPVSSPGRASGTTR----PGP 128
Query: 64 LPTCALQ-------------RVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAG 110
L L+ + AG RR + + P + R G G
Sbjct: 129 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 111 RVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQ 170
AP + P G K PS ++ + G Q+PA +L +
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 171 EGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLP-----FPPLWPHSTTT 225
P R GP G AP+ + P G + P P P L P S++
Sbjct: 249 LSSP--ARSGPSARG--TPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSP 303
Query: 226 TSPSSPL------------FWSPLPPRLP-----TQRLPQVPPLPL--PQIQALSSAWVV 266
+ SP +PLP LP LP PP P P +Q L S
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPS---- 359
Query: 267 LPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYP 300
PP P + + + SL PP P
Sbjct: 360 -PPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP 392
Score = 43.1 bits (100), Expect = 6e-04
Identities = 69/244 (28%), Positives = 87/244 (35%), Gaps = 52/244 (21%)
Query: 137 SPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPL-RPGWQDGHAPSRD 195
SP A+P S P+ T P P+ P LA P PL +P Q A +
Sbjct: 740 SPPASPPMS-PSATPP---PRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATP 795
Query: 196 GASRTPSGTEDQLYPGTLPFPPL--WPHSTTTTSP--SSPLFWSPL------PPRLPTQR 245
PS +PG PF P P S T P + P+ +PL PP PT +
Sbjct: 796 PLQALPSPPAS--FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 853
Query: 246 LPQVPPLPLPQIQA----LSSAWVVLPPGKGEEGP-----GPEL--HSGCL----DGLRS 290
P+ PP P P L+ A PP P GP+L HS + LR
Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 913
Query: 291 LFEGP-------PCP-------YPGAWIPFQVPGTAH------PSPATPSGDPSMEEHLS 330
GP P P +P AW P A P P P+ P + L
Sbjct: 914 YDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLC 973
Query: 331 VMYE 334
+YE
Sbjct: 974 TIYE 977
Score = 42.7 bits (99), Expect = 8e-04
Identities = 89/381 (23%), Positives = 119/381 (31%), Gaps = 96/381 (25%)
Query: 18 AYQARPQVSGGEE---GGRRGGGERPSSKPVRGAERALGSAQAQRHP------------- 61
A + RP GG + P S P R A G+ +A HP
Sbjct: 223 AARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRP 282
Query: 62 ----PP----LPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVC 113
PP P L G + R + L A A +
Sbjct: 283 PQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLP 342
Query: 114 VAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGR 173
+AP SP P L PA PS++ P+ T P P Q S Q
Sbjct: 343 LAPPSPSAPPSLQTLPS------PPATPPSQAPPSMTTP---PMQ------APPSLQTIP 387
Query: 174 PVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHST---------- 223
P+ P Q +P + + + T F + P T
Sbjct: 388 PIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRP 447
Query: 224 TTTSPSSPLFWSPLP----PRLPTQRLPQVPPLPLP----QIQALSS----------AWV 265
+T P SP +PL P L T P V PL P +QALSS + +
Sbjct: 448 ASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSL 507
Query: 266 VLPPGKGE--------EGPGPELHSGCLDGLRSL----------------FEGPPCPYPG 301
++PP + + + P L + L+ L SL E PPCP P
Sbjct: 508 IMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP- 566
Query: 302 AWIPFQVPGT--AHPSPATPS 320
P Q P + P P TPS
Sbjct: 567 --CPLQAPPSPLTTPPPETPS 585
Score = 40.0 bits (92), Expect = 0.005
Identities = 96/339 (28%), Positives = 118/339 (34%), Gaps = 91/339 (26%)
Query: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRA---RTSVLPGLRAVRRGQGQAAGRVCVAPD 117
PPP T A RV LG AGA GR+ A RA + +P A R G ++AG
Sbjct: 35 PPPPVTPAALRV--LGAAGAVGRKPLAERAGGIGGATIPE-SAPRAGPTRSAG------T 85
Query: 118 SPRLPVPRGDLKGRGREI-------RSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQ 170
S R P R GRG P ++P R+S TRP Q+ R++ E +
Sbjct: 86 SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRAS-GTTRPGPLGQKGLRIS-AEETVA 143
Query: 171 EGRPVCTRFGPLRPGWQDGHAPSRDGASRTP-------------SGTEDQL---YPGTLP 214
G+ P R G RD + TP +GTE L P P
Sbjct: 144 RGK---ATEAPKRSALSAG--ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 215 FPP----------LWPHSTTTTSP----------------SSPLFWSPLPPRLP------ 242
PP HSTT SP S L S P P
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Query: 243 ---TQRLPQVPPLPLPQ-IQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCP 298
T R P P P P+ +QAL V P GP S S + P P
Sbjct: 259 ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVP 318
Query: 299 YP-GAWIPFQVPGTAHPS----------PATPSGDPSME 326
P A P +P T PS P +PS PS++
Sbjct: 319 PPDNAATP--LPATLPPSPPLATPLPLAPPSPSAPPSLQ 355
Score = 34.7 bits (78), Expect = 0.21
Identities = 65/228 (28%), Positives = 81/228 (35%), Gaps = 27/228 (11%)
Query: 118 SPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRP--AGRPQQ--PARLALGERSWQEGR 173
+P P P ++ SP +PS + P+Q P A P Q P+ A S
Sbjct: 663 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722
Query: 174 PVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLW-PHSTTTTSPSSPL 232
P P Q +P +PS T P L PPL P S + P SPL
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPA-SPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPL 781
Query: 233 FWSPLPPRLPTQRLPQVPP-LPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSL 291
P PQ PP L P +QAL S PG+ P L + L
Sbjct: 782 AKPP----------PQAPPALATPPLQALPSPPASF-PGQAPFSPSASL------PMSPL 824
Query: 292 FEGPPCPYPGAWIP-FQVPGT--AHPSPATPSGDPSMEEHLSVMYERL 336
PP P P QVP + A P+ P P+ SV RL
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 872
Score = 32.7 bits (73), Expect = 0.78
Identities = 57/212 (26%), Positives = 72/212 (33%), Gaps = 33/212 (15%)
Query: 138 PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTR-----FGPLRPGWQDGHAP 192
P A P + P P P P L S Q + F P P AP
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP--PPSPPVQAP 676
Query: 193 SRDGASR--TPSGTEDQLYPGTLPFPPLW-PHSTTTTSPSSPLFWSP--LPPRL--PTQR 245
AS +PS T P +L PPL P S + P SP P PP L P +
Sbjct: 677 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 246 LPQVPP---------LPLPQIQALSSA-WVVLPPGKGEE-------GPGPELHSGCLDGL 288
+P PP P P++ L +A + +PP P P+
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 289 RSLFEGPPCPYPGAWIPFQVPGTAHPSP-ATP 319
PP +PG PF + SP ATP
Sbjct: 797 LQALPSPPASFPGQ-APFSPSASLPMSPLATP 827
Score = 32.3 bits (72), Expect = 1.0
Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 210 PGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPP 269
P T P PP P S T P +P P P Q LP P PL + + LPP
Sbjct: 575 PLTTP-PPETPSSIATPPPQAP----PALASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 270 GKGEEGP--GPELHSGCLDGLRS-------LFEGP--PCPYPGAWIPFQVPGTAHPSP-A 317
+ P P L ++ L + P P P P PF P + SP A
Sbjct: 630 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 689
Query: 318 TP 319
TP
Sbjct: 690 TP 691
Score = 31.6 bits (70), Expect = 1.7
Identities = 60/218 (27%), Positives = 74/218 (33%), Gaps = 30/218 (13%)
Query: 115 APDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRP 174
AP SP +P L P A P ++P P P P A R P
Sbjct: 811 APFSPSASLPMSPLA-----TPPPQAPPVLAAPLLQVPPSPPASPTLQA--PRRPPTPGP 863
Query: 175 VCTRFGP-LRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLF 233
+ GP L G P SR+PS T L P L HS++ TS L
Sbjct: 864 DTSVSGPRLTLALAPGPPPP---PSRSPSST--------LSGPDLAGHSSSATSTPEELR 912
Query: 234 WSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPG------PELHSGCLDG 287
P P P L + + PP PG P G DG
Sbjct: 913 GYDSGPEGGAAASPP-PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADG 971
Query: 288 LRSLFE--GPPC--PYPGAWIPFQVPGTAHPSPATPSG 321
L +++E GP P PGA P PGT+ A +G
Sbjct: 972 LCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 1009
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 43.9 bits (102), Expect = 3e-04
Identities = 60/239 (25%), Positives = 79/239 (33%), Gaps = 32/239 (13%)
Query: 20 QARPQVSGGEEGGRRGGGERPSSKPVRGAERAL----GSAQAQRHPPPLPTCALQRVDRL 75
Q P G +G GG RP P G + +++ R PP P
Sbjct: 109 QGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--------- 159
Query: 76 GVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREI 135
G GG + + PG QG + P P+ P P+GD + R
Sbjct: 160 GPPPQGGNQPQG----PPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGD---KSRSS 212
Query: 136 RSPAAAPSRSSP-AQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSR 194
+SP P P +P G P P + G +P GP PG G P
Sbjct: 213 QSPPGKPQGPPPQGGNQPQGPPPPPGK-PQGPPPQGGNKPQ----GPPPPGKPQG--PPA 265
Query: 195 DGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLP 253
G S++ S P P P P P +P P+ P PQ PP P
Sbjct: 266 QGGSKSQSARS----PPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 320
Score = 39.7 bits (91), Expect = 0.006
Identities = 58/228 (25%), Positives = 78/228 (34%), Gaps = 37/228 (16%)
Query: 30 EGGRRGGGERPSSKPVRGAERALGSAQAQRHPPPLPTCALQRVDRLGVAGAGGRRCRACR 89
+GG R G P KP +G +++ R PP P G GG + +
Sbjct: 124 QGGNRPQGPPPPGKP-QGPPPQGDKSRSPRSPPGKPQ---------GPPPQGGNQPQG-- 171
Query: 90 ARTSVLPGLRAVRRGQGQAAGRVCVAPDSPRLPVPRGDLKGRGREIRSPAAAPSRSSP-A 148
PG QG + P P+ P P+GD + R +SP P P
Sbjct: 172 --PPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGD---KSRSSQSPPGKPQGPPPQG 226
Query: 149 QTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQL 208
+P G P P + G +P GP PG G P G S++ S
Sbjct: 227 GNQPQGPPPPPGK-PQGPPPQGGNKPQ----GPPPPGKPQG--PPAQGGSKSQSARS--- 276
Query: 209 YPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQ 256
PP P ++P P PP + PQ PP PQ
Sbjct: 277 -------PPGKPQGPPQQEGNNPQ--GPPPPAGGNPQQPQAPPAGQPQ 315
>gi|166999098 glutamate receptor, metabotropic 1 isoform alpha
precursor [Homo sapiens]
Length = 1194
Score = 43.5 bits (101), Expect = 4e-04
Identities = 42/154 (27%), Positives = 59/154 (38%), Gaps = 21/154 (13%)
Query: 192 PSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSP---SSPLFWSPLPPRLPTQRLPQ 248
P R +PS + P PPL H T +P + P LPP P Q+ Q
Sbjct: 965 PIRFSPPGSPSMVVHRRVPSAATTPPLPSHLTAEETPLFLAEPALPKGLPP--PLQQQQQ 1022
Query: 249 VPPLP---LPQIQALSSAWVVLPPG-----KGEEGPGPELHSGCLDGLRSLFEGPPCPYP 300
PP + Q+Q + S + P G GPG +GLRSL+ PP P
Sbjct: 1023 PPPQQKSLMDQLQGVVSNFSTAIPDFHAVLAGPGGPG--------NGLRSLYPPPPPPQH 1074
Query: 301 GAWIPFQVPGTAHPSPATPSGDPSMEEHLSVMYE 334
+P Q+ + P+ D E ++ E
Sbjct: 1075 LQMLPLQLSTFGEELVSPPADDDDDSERFKLLQE 1108
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 43.1 bits (100), Expect = 6e-04
Identities = 52/207 (25%), Positives = 69/207 (33%), Gaps = 56/207 (27%)
Query: 138 PAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGHAPSRDGA 197
P +P+++S G+P Q W P W + APS
Sbjct: 12 PEHSPAKTSAVSNTKPGQPPQ---------GWPGSNP-----------WNNPSAPSS--- 48
Query: 198 SRTPSGTEDQLYPGTLPFPP----LWPHSTTTTSPSSPLFWSPLPPRLPTQRLP------ 247
PSG P T+PF P ++P T P P +P PP P+ P
Sbjct: 49 --VPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPP--APFPPSGPSCPPPGGPYPA 104
Query: 248 ------------QVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSG-CLDGLRSLFEG 294
P +P P++ A P G GP + SG G+ +
Sbjct: 105 PTVPGPGPTGPYPTPNMPFPELPRPYGA-PTDPAAAGPLGPWGSMSSGPWAPGMGGQYPT 163
Query: 295 PPCPYPG-----AWIPFQVPGTAHPSP 316
P PYP A P Q PG A P P
Sbjct: 164 PNMPYPSPGPYPAPPPPQAPGAAPPVP 190
Score = 41.2 bits (95), Expect = 0.002
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 37/136 (27%)
Query: 190 HAPSRDGA-SRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQ 248
H+P++ A S T G Q +PG+ P+ +PS+P S +P LP P
Sbjct: 14 HSPAKTSAVSNTKPGQPPQGWPGSNPW----------NNPSAP---SSVPSGLP----PS 56
Query: 249 VPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQV 308
P +P A + + +PP GP P GPP P+P +
Sbjct: 57 ATPSTVPFGPAPTGMYPSVPP----TGPPP---------------GPPAPFPPSGPSCPP 97
Query: 309 PGTAHPSPATPSGDPS 324
PG +P+P P P+
Sbjct: 98 PGGPYPAPTVPGPGPT 113
Score = 35.8 bits (81), Expect = 0.092
Identities = 56/229 (24%), Positives = 66/229 (28%), Gaps = 95/229 (41%)
Query: 116 PDSPRLPVPRGDLKGR---GREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEG 172
P P P P G G P P+ P RP G P PA
Sbjct: 90 PSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAA---------- 139
Query: 173 RPVCTRFGPLRPGW----QDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSP 228
GPL P W AP G TP+ +P+P P+
Sbjct: 140 -------GPLGP-WGSMSSGPWAPGMGGQYPTPN----------MPYPSPGPY------- 174
Query: 229 SSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGL 288
P PP P Q PP+P W +PPG
Sbjct: 175 -------PAPP--PPQAPGAAPPVP----------WGTVPPGAW---------------- 199
Query: 289 RSLFEGPPCPYP---GAWI----------PFQVPGTAHPSPATPSGDPS 324
GPP PYP G++ PFQVP +P P G S
Sbjct: 200 -----GPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPMPGGPHS 243
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 42.7 bits (99), Expect = 8e-04
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 116 PDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPV 175
P P+ P P+GD + R RSP P P +P G P Q G Q
Sbjct: 74 PGKPQGPPPQGD---KSRSPRSPPGKPQGPPPQGGKPQGPPPQ------GGNKPQ----- 119
Query: 176 CTRFGPLRPGWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWS 235
GP PG G P G S++ S P P P P P +
Sbjct: 120 ----GPPPPGKPQG--PPAQGGSKSQSARS----PPGKPQGPPQQEGNNPQGPPPPAGGN 169
Query: 236 PLPPRLPTQRLPQVPPLP 253
P P+ P PQ PP P
Sbjct: 170 PQQPQAPPAGQPQGPPRP 187
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 42.7 bits (99), Expect = 8e-04
Identities = 38/122 (31%), Positives = 45/122 (36%), Gaps = 26/122 (21%)
Query: 210 PGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPP 269
PG LP PP+ P T +PS P P PP+LP PP P VV PP
Sbjct: 256 PGGLPLPPMPP---TGPAPSGP----PGPPQLPPPAPGVHPPAP-----------VVHPP 297
Query: 270 GKGEEGPGPELHSGC------LDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPSGDP 323
G P P +H G+ G P PG P PG P+P P
Sbjct: 298 ASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPP--APGVHPPAPGVHPPAP 355
Query: 324 SM 325
+
Sbjct: 356 GV 357
Score = 35.0 bits (79), Expect = 0.16
Identities = 37/124 (29%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 214 PFPPLWPHSTTTTSPSSPLFWSPLPPRLP-TQRLPQVPP--LPLPQIQALSSA------- 263
P PP P P + LPPR P + LP PP LPLP + A
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGP 277
Query: 264 WVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPS----PATP 319
+ PP G P P +H G+ G P PG P PG P+ P P
Sbjct: 278 PQLPPPAPGVHPPAPVVHPPA-SGVHPPAPGVHPPAPGVHPP--APGVHPPTSGVHPPAP 334
Query: 320 SGDP 323
P
Sbjct: 335 GVHP 338
Score = 31.2 bits (69), Expect = 2.3
Identities = 50/210 (23%), Positives = 62/210 (29%), Gaps = 28/210 (13%)
Query: 116 PDSPRLPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEG-RP 174
P P+LP P + + PA+ +P PA PA G G P
Sbjct: 275 PGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP---GVHPPTSGVHP 331
Query: 175 VCTRFGPLRPGWQ---DGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSP 231
P PG G P G G G P P + P +P
Sbjct: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
Query: 232 LFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSL 291
P P P + P V P P P + + PPG PG
Sbjct: 392 GVHPPAPGMHP--QAPGVHPQP-PGVHPSAPGVHPQPPGVHPSNPGVH------------ 436
Query: 292 FEGPPCPYPGAW---IPFQVPGTAHPSPAT 318
PP P P +P + PG P P T
Sbjct: 437 ---PPTPMPPMLRPPLPSEGPGNIPPPPPT 463
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/219 (26%), Positives = 80/219 (36%), Gaps = 59/219 (26%)
Query: 133 REIRSPAAAPSRSSPAQTRPAG--RPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGH 190
R++++PA +P+ S P G +PQ P R+ + R P RP Q
Sbjct: 716 RQLQAPAGSPAPSPS----PGGDDKPQVPPRVPIPPR-------------PTRPHVQLSP 758
Query: 191 APSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRL--------- 241
AP G T P P PL P + T SP P SPLPPRL
Sbjct: 759 APP--GEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKTMP 816
Query: 242 --------PTQRLPQVPPLPLPQI------------QALSSAWVVLPPGKGEEGPGPELH 281
P PQV P P+ + S+ + +LP E E +
Sbjct: 817 TTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLP----ERPSYLERY 872
Query: 282 SGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPS 320
L +S E P P +P +P + P+PA P+
Sbjct: 873 QRFLREAQSPEEPTPLP-----VPLLLPPPSTPAPAAPT 906
Score = 29.3 bits (64), Expect = 8.6
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 28/96 (29%)
Query: 237 LPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGE--EGPGPELHSGCLDGLRSLFEG 294
+PPR+P +PP P LS A PPG+ E + PGP
Sbjct: 739 VPPRVP------IPPRPTRPHVQLSPA----PPGEEETSQWPGPA--------------S 774
Query: 295 PPCPYPGAWIPFQVPGTAHPSPATPSGDPSMEEHLS 330
PP P P G+ PSP P G + LS
Sbjct: 775 PPRVPPRE--PLSPQGSRTPSPLVPPGSSPLPPRLS 808
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/219 (26%), Positives = 80/219 (36%), Gaps = 59/219 (26%)
Query: 133 REIRSPAAAPSRSSPAQTRPAG--RPQQPARLALGERSWQEGRPVCTRFGPLRPGWQDGH 190
R++++PA +P+ S P G +PQ P R+ + R P RP Q
Sbjct: 794 RQLQAPAGSPAPSPS----PGGDDKPQVPPRVPIPPR-------------PTRPHVQLSP 836
Query: 191 APSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRL--------- 241
AP G T P P PL P + T SP P SPLPPRL
Sbjct: 837 APP--GEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKTMP 894
Query: 242 --------PTQRLPQVPPLPLPQI------------QALSSAWVVLPPGKGEEGPGPELH 281
P PQV P P+ + S+ + +LP E E +
Sbjct: 895 TTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLP----ERPSYLERY 950
Query: 282 SGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPS 320
L +S E P P +P +P + P+PA P+
Sbjct: 951 QRFLREAQSPEEPTPLP-----VPLLLPPPSTPAPAAPT 984
Score = 29.3 bits (64), Expect = 8.6
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 28/96 (29%)
Query: 237 LPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGE--EGPGPELHSGCLDGLRSLFEG 294
+PPR+P +PP P LS A PPG+ E + PGP
Sbjct: 817 VPPRVP------IPPRPTRPHVQLSPA----PPGEEETSQWPGPA--------------S 852
Query: 295 PPCPYPGAWIPFQVPGTAHPSPATPSGDPSMEEHLS 330
PP P P G+ PSP P G + LS
Sbjct: 853 PPRVPPRE--PLSPQGSRTPSPLVPPGSSPLPPRLS 886
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,847,553
Number of Sequences: 37866
Number of extensions: 1779322
Number of successful extensions: 11171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 8935
Number of HSP's gapped (non-prelim): 2631
length of query: 496
length of database: 18,247,518
effective HSP length: 106
effective length of query: 390
effective length of database: 14,233,722
effective search space: 5551151580
effective search space used: 5551151580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.