Search of human proteins with 238550107

Search of human proteins with 238550107

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|238550107 SET domain containing 6 isoform a [Homo sapiens]
         (473 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|238550107 SET domain containing 6 isoform a [Homo sapiens]         951   0.0  
gi|238550105 SET domain containing 6 isoform b [Homo sapiens]         892   0.0  
gi|40068481 SET domain containing 3 isoform a [Homo sapiens]           90   4e-18
gi|40068483 SET domain containing 3 isoform b [Homo sapiens]           53   5e-07
gi|8393013 SET domain containing 4 isoform a [Homo sapiens]            46   6e-05
gi|55953063 SET domain containing 4 isoform c [Homo sapiens]           46   8e-05
gi|40353727 synaptopodin isoform A [Homo sapiens]                      33   0.56 
gi|156616308 SET and MYND domain containing 4 [Homo sapiens]           33   0.56 
gi|169205008 PREDICTED: hypothetical protein [Homo sapiens]            31   2.8  
gi|169205607 PREDICTED: hypothetical protein [Homo sapiens]            31   2.8  
gi|169204476 PREDICTED: hypothetical protein [Homo sapiens]            31   2.8  
gi|188035871 SET and MYND domain containing 2 [Homo sapiens]           30   3.6  
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            30   4.8  
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            30   4.8  
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            30   4.8  
gi|217416452 dynein, axonemal, intermediate polypeptide 2 [Homo ...    30   4.8  
gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens]        30   6.2  
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo...    30   6.2  
gi|20149304 ISY1 splicing factor homolog [Homo sapiens]                29   8.1  
gi|14149669 mitogen-activated protein kinase kinase kinase 7 int...    29   8.1  
gi|50511945 cajalin 2 isoform a [Homo sapiens]                         29   8.1  
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]    29   8.1  

>gi|238550107 SET domain containing 6 isoform a [Homo sapiens]
          Length = 473

 Score =  951 bits (2458), Expect = 0.0
 Identities = 473/473 (100%), Positives = 473/473 (100%)

Query: 1   MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAGGRRTRGGARAALTSP 60
           MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAGGRRTRGGARAALTSP
Sbjct: 1   MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAGGRRTRGGARAALTSP 60

Query: 61  PAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS 120
           PAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS
Sbjct: 61  PAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS 120

Query: 121 GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD 180
           GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD
Sbjct: 121 GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD 180

Query: 181 LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS 240
           LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS
Sbjct: 181 LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS 240

Query: 241 PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV 300
           PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV
Sbjct: 241 PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV 300

Query: 301 EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE 360
           EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE
Sbjct: 301 EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE 360

Query: 361 VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV 420
           VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV
Sbjct: 361 VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV 420

Query: 421 LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS 473
           LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS
Sbjct: 421 LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS 473


>gi|238550105 SET domain containing 6 isoform b [Homo sapiens]
          Length = 449

 Score =  892 bits (2304), Expect = 0.0
 Identities = 449/473 (94%), Positives = 449/473 (94%), Gaps = 24/473 (5%)

Query: 1   MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAGGRRTRGGARAALTSP 60
           MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKV                    
Sbjct: 1   MATQAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKV-------------------- 40

Query: 61  PAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS 120
               AVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS
Sbjct: 41  ----AVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCSIGGLLERERVALQSQS 96

Query: 121 GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD 180
           GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD
Sbjct: 97  GWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKD 156

Query: 181 LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS 240
           LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS
Sbjct: 157 LANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNS 216

Query: 241 PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV 300
           PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV
Sbjct: 217 PVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFV 276

Query: 301 EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE 360
           EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE
Sbjct: 277 EPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREE 336

Query: 361 VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV 420
           VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV
Sbjct: 337 VLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQLLQNSV 396

Query: 421 LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS 473
           LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS
Sbjct: 397 LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS 449


>gi|40068481 SET domain containing 3 isoform a [Homo sapiens]
          Length = 594

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 107/410 (26%), Positives = 175/410 (42%), Gaps = 47/410 (11%)

Query: 74  GYGMVARESVQAGELLFVVPRAALLSQHTCS---IGGLLERERVALQSQSGWVPLLLALL 130
           G+G+ A   ++A EL   VPR  L++  +     +G L  ++R+ LQ+  G + L   LL
Sbjct: 105 GFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRI-LQAM-GNIALAFHLL 162

Query: 131 HELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQS 190
            E  +P S W+PY    P     + P+++ E+E R  LQ T     V     N   +Y +
Sbjct: 163 CERASPNSFWQPYIQTLP--SEYDTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQY-A 218

Query: 191 IVLPFMEAHPDLFSLRVR---SLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAA 247
                ++ HP    L ++   + E Y   V+ VM    Q P E+        +  ++P  
Sbjct: 219 YFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRV----TLALIPLW 274

Query: 248 DILNH---LANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFVEPYP 304
           D+ NH   L     NLE    C   VA Q    G +I+  YG  +N + +   GF   + 
Sbjct: 275 DMCNHTNGLITTGYNLE-DDRC-ECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFF--FD 330

Query: 305 DNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREEVLTE 364
           +N+ D   I++   +   L   K E            +     +     F +   E    
Sbjct: 331 NNSHDRVKIKLGVSKSDRLYAMKAE------------VLARAGIPTSSVFALHFTEPPIS 378

Query: 365 EELTTTLKVLCMPAEEFRELKDQDGGGDD----KREEGSLTITNIPKLKASWRQLLQNSV 420
            +L   L+V CM  EE +E    D   D        E  ++  N  KL   W   L++  
Sbjct: 379 AQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKL---W-TFLEDRA 434

Query: 421 LLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLE 470
            L L+TY T ++ D+ +L N +    LS R + A+++R G+K IL + ++
Sbjct: 435 SLLLKTYKTTIEEDKSVLKNHD----LSVRAKMAIKLRLGEKEILEKAVK 480


>gi|40068483 SET domain containing 3 isoform b [Homo sapiens]
          Length = 296

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 16/185 (8%)

Query: 74  GYGMVARESVQAGELLFVVPRAALLSQHTCS---IGGLLERERVALQSQSGWVPLLLALL 130
           G+G+ A   ++A EL   VPR  L++  +     +G L  ++R+ LQ+  G + L   LL
Sbjct: 105 GFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRI-LQAM-GNIALAFHLL 162

Query: 131 HELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQS 190
            E  +P S W+PY    P     + P+++ E+E R  LQ T     V     N   +Y +
Sbjct: 163 CERASPNSFWQPYIQTLP--SEYDTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQY-A 218

Query: 191 IVLPFMEAHPDLFSLRVR---SLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAA 247
                ++ HP    L ++   + E Y   V+ VM    Q P E+        +  ++P  
Sbjct: 219 YFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRV----TLALIPLW 274

Query: 248 DILNH 252
           D+ NH
Sbjct: 275 DMCNH 279


>gi|8393013 SET domain containing 4 isoform a [Homo sapiens]
          Length = 440

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 89/418 (21%), Positives = 163/418 (38%), Gaps = 64/418 (15%)

Query: 74  GYGMVARESVQAGELLFVVPRAALLSQHTCS---IGGLLERERVALQSQSGWVPLLLALL 130
           G G++++ S+Q G+++  +P + LL+  T     +G  + + +      S  + L   L+
Sbjct: 59  GRGLMSQTSLQEGQMIISLPESCLLTTDTVIRSYLGAYITKWK---PPPSPLLALCTFLV 115

Query: 131 HELQAP-ASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQ 189
            E  A   S W+PY  + P+      P+    E          V   + K L     E +
Sbjct: 116 SEKHAGHRSLWKPYLEILPKAYTC--PVCLEPE----------VVNLLPKSLKAKAEEQR 163

Query: 190 SIVLPFMEAHPDLFSLRVRSLE-LYHQLVALVMAYS--------------FQEPLEEEED 234
           + V  F  +  D FS    SL+ L+ + V  + +YS              +  P + E  
Sbjct: 164 AHVQEFFASSRDFFS----SLQPLFAEAVDSIFSYSALLWAWCTVNTRAVYLRPRQRECL 219

Query: 235 EKEPNSPVMVPAADILNHLANHNANLEYS--ANCLRMVATQPIPKGHEIFNTYGQMANWQ 292
             EP++  + P  D+LNH  +      ++   +   +  T    K  E+F  YG   N +
Sbjct: 220 SAEPDTCALAPYLDLLNHSPHVQVKAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQR 279

Query: 293 LIHMYGFVEPYPDNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEG 352
           L   YGFV  +  +       +++      L  T  + ++ +   +     +    G +G
Sbjct: 280 LFLEYGFVSVHNPHACVYVSREILV---KYLPSTDKQMDKKISILKDHGYIENLTFGWDG 336

Query: 353 AFVIGREEVLTEEELTTTLKVLCMPAEEFRELKDQDGGG--DDKREEGSLTITNIPKLKA 410
                         L T LK+LC+ AE+F   K    G    D  E+ SL I      K 
Sbjct: 337 ----------PSWRLLTALKLLCLEAEKFTCWKKVLLGEVISDTNEKTSLDIAQ----KI 382

Query: 411 SWRQLLQNSVLLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQL 468
            +  + + + +L   ++   +K ++  L N+    +  W E+  L++       LH L
Sbjct: 383 CYYFIEETNAVLQKVSH---MKDEKEALINQLTLVESLWTEE--LKILRASAETLHSL 435


>gi|55953063 SET domain containing 4 isoform c [Homo sapiens]
          Length = 307

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 40/248 (16%)

Query: 74  GYGMVARESVQAGELLFVVPRAALLSQHTCS---IGGLLERERVALQSQSGWVPLLLALL 130
           G G++++ S+Q G+++  +P + LL+  T     +G  + + +      S  + L   L+
Sbjct: 59  GRGLMSQTSLQEGQMIISLPESCLLTTDTVIRSYLGAYITKWK---PPPSPLLALCTFLV 115

Query: 131 HELQAP-ASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQ 189
            E  A   S W+PY  + P+      P+    E          V   + K L     E +
Sbjct: 116 SEKHAGHRSLWKPYLEILPKAYTC--PVCLEPE----------VVNLLPKSLKAKAEEQR 163

Query: 190 SIVLPFMEAHPDLFSLRVRSLE-LYHQLVALVMAYS--------------FQEPLEEEED 234
           + V  F  +  D FS    SL+ L+ + V  + +YS              +  P + E  
Sbjct: 164 AHVQEFFASSRDFFS----SLQPLFAEAVDSIFSYSALLWAWCTVNTRAVYLRPRQRECL 219

Query: 235 EKEPNSPVMVPAADILNHLANHNANLEYS--ANCLRMVATQPIPKGHEIFNTYGQMANWQ 292
             EP++  + P  D+LNH  +      ++   +   +  T    K  E+F  YG   N +
Sbjct: 220 SAEPDTCALAPYLDLLNHSPHVQVKAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQR 279

Query: 293 LIHMYGFV 300
           L   YGFV
Sbjct: 280 LFLEYGFV 287


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 19/62 (30%), Positives = 25/62 (40%)

Query: 7   RPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAGGRRTRGGARAALTSPPAQVAV 66
           +P    P  GGD+ PV+   +W  R      P  S R  G   +    +  TSPP     
Sbjct: 633 QPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTPGA 692

Query: 67  SR 68
           SR
Sbjct: 693 SR 694


>gi|156616308 SET and MYND domain containing 4 [Homo sapiens]
          Length = 804

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 245 PAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFVEPYP 304
           P   +LNH  + N ++ + +    + A+Q I KG EI            +H YG  +   
Sbjct: 533 PVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEI------------LHCYGPHKSRM 580

Query: 305 DNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLC 343
              +    ++     + A    +TEA R     RW+  C
Sbjct: 581 GVAERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFC 619


>gi|169205008 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 234

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 4   QAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAG-GRRTRGGARAALTSPPA 62
           Q +R   A  V G   D   CFL W  ++G E +    +  G G R RGG  + + + P 
Sbjct: 110 QGRRGSAAAAVLGLHGDIFPCFLPWLLKLGREAADGAVKPGGSGDRGRGGRGSGVRAGPG 169

Query: 63  QVAVSRQG 70
               + +G
Sbjct: 170 GAEAAGEG 177


>gi|169205607 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 234

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 4   QAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAG-GRRTRGGARAALTSPPA 62
           Q +R   A  V G   D   CFL W  ++G E +    +  G G R RGG  + + + P 
Sbjct: 110 QGRRGSAAAAVLGLHGDIFPCFLPWLLKLGREAADGAVKPGGSGDRGRGGRGSGVRAGPG 169

Query: 63  QVAVSRQG 70
               + +G
Sbjct: 170 GAEAAGEG 177


>gi|169204476 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 234

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 4   QAKRPRVAGPVDGGDLDPVACFLSWCRRVGLELSPKVSERAG-GRRTRGGARAALTSPPA 62
           Q +R   A  V G   D   CFL W  ++G E +    +  G G R RGG  + + + P 
Sbjct: 110 QGRRGSAAAAVLGLHGDIFPCFLPWLLKLGREAADGAVKPGGSGDRGRGGRGSGVRAGPG 169

Query: 63  QVAVSRQG 70
               + +G
Sbjct: 170 GAEAAGEG 177


>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
          Length = 433

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 232 EEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQM--- 288
           E++E       + P   ++NH    N  + Y      + A Q I  G E+F +Y  +   
Sbjct: 187 EDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSYIDLLYP 246

Query: 289 ---ANWQLIHMYGFVEPYPDNTDDTADIQMVTVREAALQGTKTEAERHLV 335
               N +L   Y F     + T    D   V +R+ +    K EA R +V
Sbjct: 247 TEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLS-DPPKAEAIRDMV 295


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 5   AKRPRVAGPVDGGDLDPVACFLSWCRR--------VGLELSPKVS---ERAGGRRTRGGA 53
           A  PR+A P+ G     ++ F   CRR         GL L   +S   E  G RR RGG 
Sbjct: 194 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 253

Query: 54  R---------AALTSPPAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCS 104
                      AL SPP     +  G  AG    AR+  + G    V PR    +Q    
Sbjct: 254 ERRVRGRRQGCALGSPPIPAGPAAPGR-AGERRAARQWRKRGGGPGVSPREG--AQGEGV 310

Query: 105 IGGLLERER 113
            GG+  R R
Sbjct: 311 RGGVTPRAR 319


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 5   AKRPRVAGPVDGGDLDPVACFLSWCRR--------VGLELSPKVS---ERAGGRRTRGGA 53
           A  PR+A P+ G     ++ F   CRR         GL L   +S   E  G RR RGG 
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347

Query: 54  R---------AALTSPPAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCS 104
                      AL SPP     +  G  AG    AR+  + G    V PR    +Q    
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGR-AGERRAARQWRKRGGGPGVSPREG--AQGEGV 404

Query: 105 IGGLLERER 113
            GG+  R R
Sbjct: 405 RGGVTPRAR 413


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 5   AKRPRVAGPVDGGDLDPVACFLSWCRR--------VGLELSPKVS---ERAGGRRTRGGA 53
           A  PR+A P+ G     ++ F   CRR         GL L   +S   E  G RR RGG 
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347

Query: 54  R---------AALTSPPAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCS 104
                      AL SPP     +  G  AG    AR+  + G    V PR    +Q    
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGR-AGERRAARQWRKRGGGPGVSPREG--AQGEGV 404

Query: 105 IGGLLERER 113
            GG+  R R
Sbjct: 405 RGGVTPRAR 413


>gi|217416452 dynein, axonemal, intermediate polypeptide 2 [Homo
           sapiens]
          Length = 605

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 14/68 (20%)

Query: 346 EMVGEEGAFVIGREEVLTEEELTTTLKVLCMPAEE------FRELKDQDGGGDDKREEGS 399
           EM  +E     GR+E  T+EEL   L+ L   AEE      F ELK        K+E  +
Sbjct: 516 EMRLKEKGKAEGRDEEQTDEELAVDLEALVSKAEEEFFDIIFAELK--------KKEADA 567

Query: 400 LTITNIPK 407
           + +T +P+
Sbjct: 568 IKLTPVPQ 575


>gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens]
          Length = 551

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 311 ADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEG---AFVIGREEVLTEEEL 367
           A+I  V  ++ ALQ T  +        RW+  C+L  V +       ++G  +    ++L
Sbjct: 42  ANISCVWSQDGALQDTSCQVHAWPDRRRWNQTCELLPVSQASWACNLILGAPD---SQKL 98

Query: 368 TT----TLKVLCMPAEEFRELKDQD 388
           TT    TL+VLC     +R +  QD
Sbjct: 99  TTVDIVTLRVLCREGVRWRVMAIQD 123


>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
            sapiens]
          Length = 2517

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 1/93 (1%)

Query: 201  DLFSLRVRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADI-LNHLANHNAN 259
            DL +   +  +LY  L + ++A   Q  L + ED +  + P+ +P  D+ L HL   ++ 
Sbjct: 1103 DLVTECEKYAQLYSNLTSSILAGCIQMVLGQIEDHRRTHQPINIPFFDVFLRHLCQGSSV 1162

Query: 260  LEYSANCLRMVATQPIPKGHEIFNTYGQMANWQ 292
                  C   V     P        +     W+
Sbjct: 1163 EVKEDKCWEKVEVSSNPHRASKLTDHNPKTYWE 1195


>gi|20149304 ISY1 splicing factor homolog [Homo sapiens]
          Length = 285

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 356 IGREEVLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQL 415
           + R E   EEE    + +  +  EE  E   Q+ GGDD +++  +    +P  +     L
Sbjct: 197 LARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGDDSQQK-FIAHVPVPSQQEIEEAL 255

Query: 416 LQNSVLLTLQTYATD 430
           ++   +  LQ YA++
Sbjct: 256 VRRKKMELLQKYASE 270


>gi|14149669 mitogen-activated protein kinase kinase kinase 7
           interacting protein 2 [Homo sapiens]
          Length = 693

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 12/82 (14%)

Query: 236 KEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIH 295
           K  NS   +P+ + +  L + N  L+   +CL         K  ++F   G   N   IH
Sbjct: 578 KRSNSISQIPSLEEMQQLRSCNRQLQIDIDCL--------TKEIDLFQARGPHFNPSAIH 629

Query: 296 MY----GFVEPYPDNTDDTADI 313
            +    GFV P P    D   I
Sbjct: 630 NFYDNIGFVGPVPPKPKDQRSI 651


>gi|50511945 cajalin 2 isoform a [Homo sapiens]
          Length = 1248

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 182 ANIRSEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEE-EDEKEPNS 240
           ANI+      VL  ++ HP   SL++ +L L   L  +  +   +EP++E+   E   +S
Sbjct: 252 ANIKDSLGRTVLDILKEHPSQKSLQIATL-LQEYLEGVGRSTVLEEPVQEDATQETHISS 310

Query: 241 PVMVPA 246
           PV  P+
Sbjct: 311 PVESPS 316


>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
          Length = 4861

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 40   VSERAGGRRTRGGARAALTSPPAQVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLS 99
            V + + GR T G   AAL +P  +V   R+ T A   ++AR  V     L  V      S
Sbjct: 3147 VEKSSSGRITLGEQAAALANPHDRVVALRRVTAAAQVLLARTMVMRALSLLSV------S 3200

Query: 100  QHTCSIGGLLE 110
              +CS+   LE
Sbjct: 3201 GSSCSLAAGLE 3211


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,370,842
Number of Sequences: 37866
Number of extensions: 844659
Number of successful extensions: 2747
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2733
Number of HSP's gapped (non-prelim): 24
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.