Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DPYD Sequence: fasta or formatted (173aa) NCBI GI: 237757300
Description:

dihydropyrimidine dehydrogenase isoform 2

Referenced in:

Pyrimidine Biosynthesis and Catabolism

Other entries for this name:
alt prot [1025aa] dihydropyrimidine dehydrogenase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         15           2
 C cysteine            6.4         11           1
 D aspartate           5.8         10           2
 E glutamate           4.6          8           2
 F phenylalanine       3.5          6           1
 G glycine             5.8         10           2
 H histidine           2.3          4           1
 I isoleucine          5.8         10           1
 K lysine              8.1         14           2
 L leucine            11.0         19           1
 M methionine          2.9          5           1
 N asparagine          7.5         13           2
 P proline             4.6          8           1
 Q glutamine           2.3          4           2
 R arginine            2.9          5           1
 S serine              6.4         11           1
 T threonine           7.5         13           2
 V valine              1.7          3           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.7          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dihydropyrimidine dehydrogenase isoform 2 
DPYD                  0.935   dihydropyrimidine dehydrogenase isoform 1 
HOOK2                 0.018   hook homolog 2 isoform 2 
HOOK2                 0.018   hook homolog 2 isoform 1 
ZNF100                0.015   zinc finger protein 100 
ZNF33B                0.015   zinc finger protein 33B 
LOC646864             0.012   PREDICTED: similar to hCG36734 
LOC646864             0.012   PREDICTED: similar to hCG36734 
LOC646864             0.012   PREDICTED: similar to hCG36734 
ZNF473                0.012   zinc finger protein 473 
ZNF473                0.012   zinc finger protein 473 
ZNF674                0.012   zinc finger family member 674 isoform 2 
ZNF674                0.012   zinc finger family member 674 isoform 1 
CASP8AP2              0.012   caspase 8 associated protein 2 
CASP8AP2              0.012   caspase 8 associated protein 2 
CASP8AP2              0.012   caspase 8 associated protein 2 
ZNF680                0.009   zinc finger protein 680 isoform 1 
ZXDB                  0.009   zinc finger, X-linked, duplicated B 
RSL1D1                0.009   ribosomal L1 domain containing 1 
PCSK5                 0.006   proprotein convertase subtilisin/kexin type 5 prepro...
ZXDA                  0.006   zinc finger, X-linked, duplicated A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press