Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NRG1 Sequence: fasta or formatted (207aa) NCBI GI: 236463969
Description:

neuregulin 1 isoform HRG-beta3b

Referenced in:

Epidermal Growth Factor
Neurons

Other entries for this name:
alt prot [645aa] neuregulin 1 isoform HRG-beta1
alt prot [637aa] neuregulin 1 isoform HRG-beta2
alt prot [241aa] neuregulin 1 isoform HRG-beta3
alt prot [211aa] neuregulin 1 isoform HRG-gamma
alt prot [422aa] neuregulin 1 isoform GGF2
alt prot [607aa] neuregulin 1 isoform HRG-beta1c
alt prot [308aa] neuregulin 1 isoform ndf43c
alt prot [624aa] neuregulin 1 isoform HRG-beta1b
alt prot [590aa] neuregulin 1 isoform HRG-beta1d
alt prot [194aa] neuregulin 1 isoform HRG-gamma2
alt prot [459aa] neuregulin 1 isoform ndf43b
alt prot [177aa] neuregulin 1 isoform HRG-gamma3
alt prot [420aa] neuregulin 1 isoform HRG-beta2b
alt prot [296aa] neuregulin 1 isoform SMDF
alt prot [462aa] neuregulin 1 isoform ndf43
alt prot [640aa] neuregulin 1 isoform HRG-alpha
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         12           2
 C cysteine            3.9          8           1
 D aspartate           1.9          4           1
 E glutamate           8.2         17           1
 F phenylalanine       3.4          7           1
 G glycine             7.7         16           2
 H histidine           0.5          1           1
 I isoleucine          2.9          6           1
 K lysine             13.0         27           3
 L leucine             6.8         14           1
 M methionine          2.4          5           1
 N asparagine          6.3         13           1
 P proline             4.8         10           2
 Q glutamine           2.4          5           1
 R arginine            4.8         10           1
 S serine             13.5         28           2
 T threonine           5.3         11           2
 V valine              3.4          7           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuregulin 1 isoform HRG-beta3b 
NRG1                  0.952   neuregulin 1 isoform HRG-beta3 
NRG1                  0.899   neuregulin 1 isoform ndf43b 
NRG1                  0.899   neuregulin 1 isoform HRG-beta2b 
NRG1                  0.899   neuregulin 1 isoform HRG-beta2 
NRG1                  0.899   neuregulin 1 isoform HRG-beta1 
NRG1                  0.835   neuregulin 1 isoform HRG-gamma3 
NRG1                  0.835   neuregulin 1 isoform GGF2 
NRG1                  0.823   neuregulin 1 isoform HRG-alpha 
NRG1                  0.823   neuregulin 1 isoform ndf43 
NRG1                  0.810   neuregulin 1 isoform HRG-gamma2 
NRG1                  0.790   neuregulin 1 isoform HRG-gamma 
NRG1                  0.780   neuregulin 1 isoform HRG-beta1d 
NRG1                  0.754   neuregulin 1 isoform HRG-beta1c 
NRG1                  0.734   neuregulin 1 isoform HRG-beta1b 
NRG1                  0.342   neuregulin 1 isoform SMDF 
NRG2                  0.246   neuregulin 2 isoform 2 
NRG2                  0.246   neuregulin 2 isoform 4 
NRG2                  0.225   neuregulin 2 isoform 3 
NRG2                  0.225   neuregulin 2 isoform 1 
NRG1                  0.220   neuregulin 1 isoform ndf43c 
NTM                   0.078   neurotrimin isoform 2 
NTM                   0.078   neurotrimin isoform 1 
TTN                   0.073   titin isoform N2-A 
PALLD                 0.073   palladin 
NTM                   0.071   neurotrimin isoform 3 
NRG3                  0.066   neuregulin 3 
LSAMP                 0.066   limbic system-associated membrane protein 
NTM                   0.063   neurotrimin isoform 4 
TTN                   0.063   titin isoform novex-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press