Search of human proteins with 23618867

Search of human proteins with 23618867

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23618867 sideroflexin 1 [Homo sapiens]
         (322 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23618867 sideroflexin 1 [Homo sapiens]                             649   0.0  
gi|31621303 sideroflexin 3 [Homo sapiens]                             519   e-147
gi|30578418 sideroflexin 2 [Homo sapiens]                             353   9e-98
gi|21389351 sideroflexin 5 [Homo sapiens]                             228   6e-60
gi|47458811 sideroflexin 4 [Homo sapiens]                              84   2e-16
gi|239747667 PREDICTED: hypothetical protein XP_002348225 [Homo ...    31   1.3  
gi|24496783 colony stimulating factor 3 receptor isoform c precu...    30   3.8  
gi|224458301 family with sequence similarity 186, member A [Homo...    29   4.9  
gi|27437045 colony stimulating factor 3 receptor isoform d precu...    29   6.4  
gi|4503081 colony stimulating factor 3 receptor isoform a precur...    29   6.4  
gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens]       28   8.4  
gi|84662781 DCP1 decapping enzyme homolog A [Homo sapiens]             28   8.4  
gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens]       28   8.4  
gi|114796626 solute carrier family 16, member 8 [Homo sapiens]         28   8.4  

>gi|23618867 sideroflexin 1 [Homo sapiens]
          Length = 322

 Score =  649 bits (1674), Expect = 0.0
 Identities = 322/322 (100%), Positives = 322/322 (100%)

Query: 1   MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP 60
           MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP
Sbjct: 1   MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP 60

Query: 61  PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW 120
           PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW
Sbjct: 61  PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW 120

Query: 121 QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV 180
           QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV
Sbjct: 121 QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV 180

Query: 181 PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG 240
           PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG
Sbjct: 181 PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG 240

Query: 241 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA 300
           MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA
Sbjct: 241 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA 300

Query: 301 ELQAKIQESHPELRRVYFNKGL 322
           ELQAKIQESHPELRRVYFNKGL
Sbjct: 301 ELQAKIQESHPELRRVYFNKGL 322


>gi|31621303 sideroflexin 3 [Homo sapiens]
          Length = 325

 Score =  519 bits (1337), Expect = e-147
 Identities = 245/320 (76%), Positives = 284/320 (88%)

Query: 3   GELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPPG 62
           GELP +INI+EPRWDQSTF+GRA HFFTVTDPRN+LL+  QLE++R IV +YR G+V PG
Sbjct: 6   GELPLDINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQLEASRNIVQNYRAGVVTPG 65

Query: 63  LTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQW 122
           +TE++LWRAKY+YDSAFHPDTGEK++LIGRMSAQVPMNMTITGCM+TFYR TP V+FWQW
Sbjct: 66  ITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTITGCMLTFYRKTPTVVFWQW 125

Query: 123 INQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPF 182
           +NQSFNA+VNY+NRSGD P+TV +LGTAYVSATTGAVATALGL +LTKH+ PL+GRFVPF
Sbjct: 126 VNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATALGLKSLTKHLPPLVGRFVPF 185

Query: 183 AAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMA 242
           AAVAAANCINIPLMRQREL+VGIPV DE G RLG S  AAKQ I QVV+SRI MA P MA
Sbjct: 186 AAVAAANCINIPLMRQRELQVGIPVADEAGQRLGYSVTAAKQGIFQVVISRICMAIPAMA 245

Query: 243 IPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAEL 302
           IPP IM+TLEKK FLKR PW+ AP+QVGLVGFCLVFATPLCCALFPQKSS+ +++LE EL
Sbjct: 246 IPPLIMDTLEKKDFLKRRPWLGAPLQVGLVGFCLVFATPLCCALFPQKSSIHISNLEPEL 305

Query: 303 QAKIQESHPELRRVYFNKGL 322
           +A+I E +P +  VY+NKGL
Sbjct: 306 RAQIHEQNPSVEVVYYNKGL 325


>gi|30578418 sideroflexin 2 [Homo sapiens]
          Length = 322

 Score =  353 bits (907), Expect = 9e-98
 Identities = 176/314 (56%), Positives = 224/314 (71%), Gaps = 1/314 (0%)

Query: 10  NIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPPGLTENELW 69
           NI  PRWDQ TF+GR  HF  +TDPR + ++  +L+ A+ +V   R G+VPPG    +L 
Sbjct: 9   NIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGTQVEQLL 68

Query: 70  RAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNA 129
            AK +YDSAFHPDTGEKM +IGRMS Q+P  M ITG M+ FYRT PAV+FWQW+NQSFNA
Sbjct: 69  YAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWVNQSFNA 128

Query: 130 VVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPFAAVAAAN 189
           +VNYTNR+  +P +V ++  +Y +ATT AVATA+G+N LTK   PL+GR+VPFAAVAAAN
Sbjct: 129 LVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVPFAAVAAAN 188

Query: 190 CINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMN 249
           C+NIP+MRQ+EL  GI V D N N +G S  AA   ITQVV+SRI M+APGM + P IM 
Sbjct: 189 CVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIME 248

Query: 250 TLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQES 309
            LEK  F+++   + AP+QV L G  L+F  P+ C LFPQK  + V+ LE +LQ  I+  
Sbjct: 249 RLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPKLQDTIKAK 308

Query: 310 HPELR-RVYFNKGL 322
           + EL   VYFNKGL
Sbjct: 309 YGELEPYVYFNKGL 322


>gi|21389351 sideroflexin 5 [Homo sapiens]
          Length = 340

 Score =  228 bits (581), Expect = 6e-60
 Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 17/330 (5%)

Query: 2   SGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPP 61
           S + PP   + +PR+ Q++F GR  HF  + DPR + +T  +L  A +++ DY+ G + P
Sbjct: 19  SSDAPP-FQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRLREAVQLLEDYKHGTLRP 77

Query: 62  GLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQ 121
           G+T  +LW A+ I  +  HPDT EK+ +  RMS  +P    I   ++   +T  + +FWQ
Sbjct: 78  GVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIVVGLLLPNQTLASTVFWQ 137

Query: 122 WINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSP------- 174
           W+NQS NA VNY NR+   P   ++    Y+ A   AV+ A+GLN L +  +        
Sbjct: 138 WLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVGLNVLVQKANKFTPATRL 197

Query: 175 LIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRI 234
           LI RFVPF AVA+AN  N+ LMR  EL+ GI V D +GN +G S  AA+ A+ +  ++R+
Sbjct: 198 LIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGSSKIAARHALLETALTRV 257

Query: 235 LMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQ--VGLVGFCLVFATPLCCALFPQKSS 292
           ++  P + +PP +M+ LEK A L+  P +  P+Q  V L  F L  A PL  +LFPQ S 
Sbjct: 258 VLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFGL--ALPLAISLFPQMSE 315

Query: 293 MSVTSLEAELQAKIQESHPELRRVYFNKGL 322
           +  + LE E+           R V +NKGL
Sbjct: 316 IETSQLEPEIAQATSS-----RTVVYNKGL 340


>gi|47458811 sideroflexin 4 [Homo sapiens]
          Length = 337

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 17/313 (5%)

Query: 17  DQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPPGLTENELWRAKYIYD 76
           ++ +FI R   +  + DP N+ ++ E +E++R+++    + +  P   +  +  A     
Sbjct: 35  ERQSFIRRFLQWTELLDPTNVFISVESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSL 93

Query: 77  SAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNR 136
           +  HPD+   +  + R +A +P         MT  +   +V+  Q    ++ A  N  N 
Sbjct: 94  ATVHPDSSNLIPKLFRPAAFLPFMAPTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN- 152

Query: 137 SGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVS-------PLIGRFVPFAAVAAAN 189
            G+   T   L  + + A  GAVA++  L  + + V        P I R +P   +  A+
Sbjct: 153 -GNRSYTCKPLERSLLMA--GAVASSTFLGVIPQFVQMKYGLTGPWIKRLLPVIFLVQAS 209

Query: 190 CINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMN 249
            +N+ + R  E   GI V D+ GN LG S  A  +A+ + + SRI++      IP     
Sbjct: 210 GMNVYMSRSLESIKGIAVMDKEGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTY 269

Query: 250 TLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQES 309
             ++  + ++ P     +++      +    P   ++FPQ   +   SLE ++Q+  +E+
Sbjct: 270 FFKRTQYFRKNPGSLWILKLSCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEET 329

Query: 310 HPELRRVYFNKGL 322
                 +++++G+
Sbjct: 330 -----EIFYHRGV 337


>gi|239747667 PREDICTED: hypothetical protein XP_002348225 [Homo
           sapiens]
          Length = 86

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)

Query: 241 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMS 294
           M +  +I   L  KAF+++ P       V   G C VF    CC  F Q+S  S
Sbjct: 1   MGVSEYIQGALVVKAFVQQSPCEVLGAFVHGCGVCRVFGDSSCCQAFVQQSPPS 54


>gi|24496783 colony stimulating factor 3 receptor isoform c
           precursor [Homo sapiens]
          Length = 863

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 51/226 (22%), Positives = 82/226 (36%), Gaps = 40/226 (17%)

Query: 73  YIYDSAFHPDTGEKMIL--IGRMSAQ---VPMNMTITGCMMTFYRTTPAVLFWQWI-NQS 126
           Y Y     P    ++ L  IG+  AQ   VP    +    +T Y      +FW    NQS
Sbjct: 519 YAYSQEMAPSHAPELHLKHIGKTWAQLEWVPEPPELGKSPLTHY-----TIFWTNAQNQS 573

Query: 127 FNAVVNYTNRS----GDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPF 182
           F+A++N ++R     G  P ++  +     S      +T L L  LT   S L      F
Sbjct: 574 FSAILNASSRGFVLHGLEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLF 633

Query: 183 AAVAAANCI------------------NIPLMRQRELKVGIPVTDEN------GNRLGES 218
             +    C+                  ++P      L   +P   E       G  LG++
Sbjct: 634 GLLLLLTCLCGTAWLCCSPNRKNPLWPSVPDPAHSSLGSWVPTIMEELPGPRQGQWLGQT 693

Query: 219 ANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMS 264
           +  ++ A+T     +     PG+  PP    T+ ++   K  PW S
Sbjct: 694 SEMSR-ALTPHPCVQDAFQLPGLGTPPITKLTVLEEDEKKPVPWES 738


>gi|224458301 family with sequence similarity 186, member A [Homo
            sapiens]
          Length = 2351

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 141  PLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPFAAVAAANCINIPLMRQRE 200
            PLT  +  T  ++ T    A ALG+   T+    L     P  A A    + +PL  Q+ 
Sbjct: 1326 PLTPQQAQTQEITLTPQQ-AQALGMPLTTQQAQELGIPLTPQHAQA----LGMPLTTQQA 1380

Query: 201  LKVGIPVTDENGNRLG 216
             ++GIP+T +    LG
Sbjct: 1381 QELGIPLTPQQAQALG 1396


>gi|27437045 colony stimulating factor 3 receptor isoform d
           precursor [Homo sapiens]
          Length = 783

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 31/208 (14%)

Query: 73  YIYDSAFHPDTGEKMIL--IGRMSAQ---VPMNMTITGCMMTFYRTTPAVLFWQWI-NQS 126
           Y Y     P    ++ L  IG+  AQ   VP    +    +T Y      +FW    NQS
Sbjct: 519 YAYSQEMAPSHAPELHLKHIGKTWAQLEWVPEPPELGKSPLTHY-----TIFWTNAQNQS 573

Query: 127 FNAVVNYTNRS----GDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPL------I 176
           F+A++N ++R     G  P ++  +     S      +T L L  LT   S L       
Sbjct: 574 FSAILNASSRGFVLHGLEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLF 633

Query: 177 GRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILM 236
           G  +    +     +     R+  L   +P          + A+++  +    ++     
Sbjct: 634 GLLLLLTCLCGTAWLCCSPNRKNPLWPSVP----------DPAHSSLGSWVPTIMEEDAF 683

Query: 237 AAPGMAIPPFIMNTLEKKAFLKRFPWMS 264
             PG+  PP    T+ ++   K  PW S
Sbjct: 684 QLPGLGTPPITKLTVLEEDEKKPVPWES 711


>gi|4503081 colony stimulating factor 3 receptor isoform a precursor
           [Homo sapiens]
          Length = 836

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 31/208 (14%)

Query: 73  YIYDSAFHPDTGEKMIL--IGRMSAQ---VPMNMTITGCMMTFYRTTPAVLFWQWI-NQS 126
           Y Y     P    ++ L  IG+  AQ   VP    +    +T Y      +FW    NQS
Sbjct: 519 YAYSQEMAPSHAPELHLKHIGKTWAQLEWVPEPPELGKSPLTHY-----TIFWTNAQNQS 573

Query: 127 FNAVVNYTNRS----GDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPL------I 176
           F+A++N ++R     G  P ++  +     S      +T L L  LT   S L       
Sbjct: 574 FSAILNASSRGFVLHGLEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLF 633

Query: 177 GRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILM 236
           G  +    +     +     R+  L   +P          + A+++  +    ++     
Sbjct: 634 GLLLLLTCLCGTAWLCCSPNRKNPLWPSVP----------DPAHSSLGSWVPTIMEEDAF 683

Query: 237 AAPGMAIPPFIMNTLEKKAFLKRFPWMS 264
             PG+  PP    T+ ++   K  PW S
Sbjct: 684 QLPGLGTPPITKLTVLEEDEKKPVPWES 711


>gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens]
          Length = 1191

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 3   GELPPNINIKEPRWDQSTFIGRANHFFTVTDP-------RNILLTNEQLESARKI 50
           G L   I  ++P+ D   F+GR N +  + DP        N+LL    L++  KI
Sbjct: 208 GGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNTEKI 262


>gi|84662781 DCP1 decapping enzyme homolog A [Homo sapiens]
          Length = 582

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 38/209 (18%)

Query: 94  SAQVPMNMTITGCMMTFYRTTP---AVLFWQWI----------NQS-FNAVVNYTNRSGD 139
           +AQVP ++     MM   +TTP   + L  Q +          NQS F A +N TN +G 
Sbjct: 328 TAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGT 387

Query: 140 APLTVNELGTAYVSATTGAVAT-ALGLNALTKHVSPLIGRFV-------PFAAVAAA--- 188
           +  +V+ L    ++     + T  LG  A+    SP  G+         P +  AAA   
Sbjct: 388 SLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVA 447

Query: 189 ------NCINIPLM-RQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGM 241
                 N +  PL   Q+     + V  +  +   + A A     T   VS +L+A    
Sbjct: 448 ASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSSAIQVAGAPLVTATTTAVSSVLLA---- 503

Query: 242 AIPPFIMNTLEKKAFLKRFPWMSAPIQVG 270
             P     T+ + + L+R     +P+ +G
Sbjct: 504 --PSVFQQTVTRSSDLERKASSPSPLTIG 530


>gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens]
          Length = 1134

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 3   GELPPNINIKEPRWDQSTFIGRANHFFTVTDP-------RNILLTNEQLESARKI 50
           G L   I  ++P+ D   F+GR N +  + DP        N+LL    L++  KI
Sbjct: 208 GGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNTEKI 262


>gi|114796626 solute carrier family 16, member 8 [Homo sapiens]
          Length = 504

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 214 RLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVG 273
           RL + A    +A     V++ LMA  G+ +P  ++    K A +   P   A   + +VG
Sbjct: 241 RLLDLAVCTDRAFAVYAVTKFLMAL-GLFVPAILLVNYAKDAGV---PDTDAAFLLSIVG 296

Query: 274 FCLVFATPLCCAL 286
           F  + A P C AL
Sbjct: 297 FVDIVARPACGAL 309


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,496,688
Number of Sequences: 37866
Number of extensions: 444066
Number of successful extensions: 912
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 41
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.