Guide to the Human Genome
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Name: SFXN1 Sequence: fasta or formatted (322aa) NCBI GI: 23618867
Description:

sideroflexin 1

Referenced in:

Iron, Copper, and Arsenic Metabolism
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         32           3
 C cysteine            1.6          5           2
 D aspartate           2.2          7           1
 E glutamate           5.0         16           1
 F phenylalanine       5.0         16           2
 G glycine             5.9         19           1
 H histidine           1.6          5           1
 I isoleucine          6.5         21           1
 K lysine              4.0         13           2
 L leucine             8.7         28           2
 M methionine          4.0         13           2
 N asparagine          6.2         20           1
 P proline             6.8         22           2
 Q glutamine           4.0         13           1
 R arginine            5.3         17           2
 S serine              5.3         17           2
 T threonine           7.1         23           2
 V valine              7.1         23           3
 W tryptophan          1.6          5           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sideroflexin 1 
SFXN3                 0.792   sideroflexin 3 
SFXN2                 0.526   sideroflexin 2 
SFXN5                 0.325   sideroflexin 5 
SFXN4                 0.095   sideroflexin 4 
LOC100290075          0.010   PREDICTED: hypothetical protein XP_002348225 
CSF3R                 0.008   colony stimulating factor 3 receptor isoform c precu...
FAM186A               0.006   family with sequence similarity 186, member A [Homo...
CSF3R                 0.006   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.006   colony stimulating factor 3 receptor isoform a precur...
ATP11A                0.005   ATPase, class VI, type 11A isoform b 
DCP1A                 0.005   DCP1 decapping enzyme homolog A 
ATP11A                0.005   ATPase, class VI, type 11A isoform a 
SLC16A8               0.005   solute carrier family 16, member 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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