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Search of human proteins with 23592228
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like
[Homo sapiens]
(406 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 870 0.0
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 120 2e-27
gi|160707881 formin 2 [Homo sapiens] 116 3e-26
gi|14249119 Rhox homeobox family, member 2 [Homo sapiens] 116 3e-26
gi|153791494 Rhox homeobox family, member 2B [Homo sapiens] 115 5e-26
gi|23943886 Rhox homeobox family, member 1 [Homo sapiens] 109 4e-24
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 104 2e-22
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 104 2e-22
gi|14249388 retina and anterior neural fold homeobox 2 [Homo sap... 103 2e-22
gi|55743092 aristaless-like homeobox 4 [Homo sapiens] 99 7e-21
gi|239754062 PREDICTED: orthopedia homeobox [Homo sapiens] 99 9e-21
gi|14149760 orthopedia homeobox [Homo sapiens] 99 9e-21
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 98 1e-20
gi|7706501 WW domain binding protein 11 [Homo sapiens] 97 3e-20
gi|24497589 aristaless related homeobox [Homo sapiens] 96 6e-20
gi|4557489 cone-rod homeobox protein [Homo sapiens] 96 6e-20
gi|7706659 paired related homeobox 2 [Homo sapiens] 95 1e-19
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 94 3e-19
gi|169881277 PROP paired-like homeobox 1 [Homo sapiens] 93 5e-19
gi|113204604 aristaless-like homeobox 3 [Homo sapiens] 92 6e-19
gi|11056038 visual system homeobox 1 isoform a [Homo sapiens] 92 1e-18
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 91 2e-18
gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 91 2e-18
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 91 2e-18
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 91 2e-18
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 91 2e-18
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 91 2e-18
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 91 2e-18
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 90 4e-18
gi|122937321 UNC homeobox [Homo sapiens] 90 4e-18
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 870 bits (2248), Expect = 0.0
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENN 60
MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENN
Sbjct: 1 MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENN 60
Query: 61 VGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEG 120
VGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEG
Sbjct: 61 VGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEG 120
Query: 121 PQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTE 180
PQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTE
Sbjct: 121 PQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTE 180
Query: 181 DRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQ 240
DRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQ
Sbjct: 181 DRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQ 240
Query: 241 LPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM 300
LPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM
Sbjct: 241 LPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM 300
Query: 301 APVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG 360
APVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG
Sbjct: 301 APVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG 360
Query: 361 PPMAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAPVINSYYACPFF 406
PPMAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAPVINSYYACPFF
Sbjct: 361 PPMAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAPVINSYYACPFF 406
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 120 bits (301), Expect = 2e-27
Identities = 91/306 (29%), Positives = 123/306 (40%), Gaps = 60/306 (19%)
Query: 56 EAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEP-PLLELKQEQEEPP 114
E + +G + P ++ G EP PP P + E P P + + P
Sbjct: 62 ERDRRLGARPACPKAPEE-----GSEPSP----PPAPAPAPEYEAPRPYCPKEPGEARPS 112
Query: 115 QTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAA 174
GP E + +E QP ++ RR RT FT +QL ELE F++S YPDV +RE LA
Sbjct: 113 PGLPVGPATGEA-KLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 175 RLNLTEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALC 234
++NL E RVQVWFQNRRAKW+R +++ +
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKLEVSS------------------------------ 201
Query: 235 VHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPV 294
+L P+L PP + P+ P P +P S + P PG +
Sbjct: 202 ----MKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPAGGALPLESWLGPPLPGGGATAL 257
Query: 295 PPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPM 354
P PP +P P PP PP P P GP + PL P PP
Sbjct: 258 QSLPGFG-----PPAQSLPAS--YTPPPPPPPFLNSP--------PLGPGLQPLAPPPPS 302
Query: 355 APLPPG 360
P PG
Sbjct: 303 YPCGPG 308
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 116 bits (291), Expect = 3e-26
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 24/170 (14%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P+PP P A +PP P+P G+ + P PP P A +PP
Sbjct: 942 IPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP-GAGIPPPPPLPG-AGIPP 999
Query: 297 WPPM--APVPPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPM--ARVPPGPPM- 345
PP+ A +PP PP+ A +P PP+ A +PP PP+ A +PP PP+ A +PP PP+
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1059
Query: 346 -APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
A +PP PP+ A +PP PP+ A +PP PP+ A +PP +P G+ P
Sbjct: 1060 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1109
Score = 115 bits (288), Expect = 7e-26
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 29/197 (14%)
Query: 219 LGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMP----PRPPMVP---MPPRPPI--AP 269
L GA P P + L P LP + P PP+P P PP +P +PP PP+ A
Sbjct: 948 LPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1007
Query: 270 MPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM--APVPPWPPM--APVPTGPPM--APVPP 323
+PP P+ PG+ + P PP P A +PP PP+ A +PP PP+ A +P PP+ A +PP
Sbjct: 1008 IPPPPPL-PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1065
Query: 324 GPPM--ARVPPGPPM--ARVPPGPPM--APLPPGPPM--APLPPGPPM--APLPPGPPM- 372
PP+ A +PP PP+ A +PP PP+ A +PP PP+ +PP PP+ A +PP PP+
Sbjct: 1066 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLP 1125
Query: 373 -APLPPRSHVPHTGLAP 388
A +PP +P G+ P
Sbjct: 1126 GAGIPPPPPLPGAGIPP 1142
Score = 112 bits (280), Expect = 6e-25
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 214 PLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMP----PRPPMVP---MPPRPP 266
PL L GA P P + P LP + P PP+P P PP +P +PP PP
Sbjct: 965 PLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1024
Query: 267 I--APMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM--APVPPWPPM--APVPTGPPM-- 318
+ A +PP P+P G+ + P PP P A +PP PP+ A +PP PP+ A +P PP+
Sbjct: 1025 LPGAGIPPPPPLP-GAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1082
Query: 319 APVPPGPPM--ARVPPGPPM--ARVPPGPPM--APLPPGPPM--APLPPGPPM--APLPP 368
A +PP PP+ A +PP PP+ +PP PP+ A +PP PP+ A +PP PP+ A +PP
Sbjct: 1083 AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1142
Query: 369 GPPM--APLPPRSHVPHTGLAP 388
PP+ +PP +P G+ P
Sbjct: 1143 PPPLPRVGIPPPPPLPGAGIPP 1164
Score = 112 bits (279), Expect = 8e-25
Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 22/169 (13%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P PP P A +PP P+P G+ + P PP P + PP
Sbjct: 1052 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGVGIPPP 1110
Query: 297 WP-PMAPVPPWPPM--APVPTGPPM--APVPPGPPMARV--PPGPPM--ARVPPGPPM-- 345
P P A +PP PP+ A +P PP+ A +PP PP+ RV PP PP+ A +PP PP+
Sbjct: 1111 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPG 1170
Query: 346 APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
A +PP PP+ +PP PP+ +PP PP+ A +PP +P G+ P
Sbjct: 1171 AGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPP 1219
Score = 111 bits (277), Expect = 1e-24
Identities = 72/170 (42%), Positives = 99/170 (58%), Gaps = 24/170 (14%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P PP P A +PP P+P G+ + P PP P A +PP
Sbjct: 1041 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPG-AGIPP 1098
Query: 297 WPPMAPV--PPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPMARV--PPGPPM- 345
PP+ V PP PP+ A +P PP+ A +PP PP+ A +PP PP+ RV PP PP+
Sbjct: 1099 PPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLP 1158
Query: 346 -APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
A +PP PP+ A +PP PP+ +PP PP+ +PP +P G+ P
Sbjct: 1159 GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPP 1208
Score = 110 bits (276), Expect = 2e-24
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 34/179 (18%)
Query: 242 PRPPVLP---VPPMP----PRPP------MVPMPPRP-PIAPMPPMAPVPPGSRMAPVPP 287
P PP LP VP +P P+PP M+P PP P P A +PP P+P G+ + P+PP
Sbjct: 878 PPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLP-GAGILPLPP 936
Query: 288 GPRMAPVPPWPPM--APVPPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPM--A 337
P A +PP PP+ A +PP PP+ A +P PP+ A +PP PP+ A +PP PP+ A
Sbjct: 937 LPG-AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 995
Query: 338 RVPPGPPM--APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
+PP PP+ A +PP PP+ A +PP PP+ A +PP PP+ A +PP +P G+ P
Sbjct: 996 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1054
Score = 110 bits (276), Expect = 2e-24
Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 22/168 (13%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWP 298
P LP +LP+PP+P +P PP P A +PP P+P P+PP A +PP P
Sbjct: 924 PPLPGAGILPLPPLPGAG--IPPPPPLPGAAIPPPPPLPGAG--IPLPPPLPGAGIPPPP 979
Query: 299 PM--APVPPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPM--ARVPPGPPM--A 346
P+ A +PP PP+ A +P PP+ A +PP PP+ A +PP PP+ A +PP PP+ A
Sbjct: 980 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1039
Query: 347 PLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
+PP PP+ A +PP PP+ A +PP PP+ A +PP +P G+ P
Sbjct: 1040 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1087
Score = 110 bits (274), Expect = 3e-24
Identities = 77/195 (39%), Positives = 110/195 (56%), Gaps = 39/195 (20%)
Query: 231 PALCVHLVPQ--LPRPP------VLPVPP-------MPPRPPM-----VPMPPRPPIAPM 270
P + V +P +P+PP +LP PP +PP PP+ +P+PP P A +
Sbjct: 884 PGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPG-AGI 942
Query: 271 PPMAPVPPGSRMAPVPPGPRMA-PVPPWPPMAPVPPWPPM--APVPTGPPM--APVPPGP 325
PP P+ PG+ + P PP P P+PP P A +PP PP+ A +P PP+ A +PP P
Sbjct: 943 PPPPPL-PGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1001
Query: 326 PM--ARVPPGPPM--ARVPPGPPM--APLPPGPPM--APLPPGPPM--APLPPGPPM--A 373
P+ A +PP PP+ A +PP PP+ A +PP PP+ A +PP PP+ A +PP PP+ A
Sbjct: 1002 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1061
Query: 374 PLPPRSHVPHTGLAP 388
+PP +P G+ P
Sbjct: 1062 GIPPPPPLPGAGIPP 1076
Score = 110 bits (274), Expect = 3e-24
Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 24/170 (14%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P PP P A +PP P+P G+ + P PP P A +PP
Sbjct: 1030 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPG-AGIPP 1087
Query: 297 WPPM--APVPPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPM--ARVPPGPPM- 345
PP+ A +PP PP+ +P PP+ A +PP PP+ A +PP PP+ A +PP PP+
Sbjct: 1088 PPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1147
Query: 346 -APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
+PP PP+ A +PP PP+ A +PP PP+ +PP +P G+ P
Sbjct: 1148 RVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPP 1197
Score = 106 bits (264), Expect = 4e-23
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 30/175 (17%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P PP P A +PP P+P G + P PP P A +PP
Sbjct: 1063 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GVGIPPPPPLPG-AGIPP 1120
Query: 297 WPPM--APVPPWPPM--APVPTGPPMAPV--PPGPPM--ARVPPGPPM--ARVPPGPPM- 345
PP+ A +PP PP+ A +P PP+ V PP PP+ A +PP PP+ A +PP PP+
Sbjct: 1121 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1180
Query: 346 -APLPPGPPM--APLPPGPPM--APLPPGPPM-------APLPPRSHVPHTGLAP 388
+PP PP+ +PP PP+ A +PP PP+ AP PP P TG+ P
Sbjct: 1181 GVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLP-PPGTGIPP 1234
Score = 105 bits (262), Expect = 7e-23
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 28/189 (14%)
Query: 227 PALDPALCVHLVPQLPRPPVLPVPPMP------PRPPMVPMPPRPPIAP---MPPMAPVP 277
P+ P C +P ++P PP P P P +P PP+ +PP P
Sbjct: 856 PSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPL 915
Query: 278 PGSRMAPVP--PGPRMAPVPPWPPMAPVPPWPPM--APVPTGPPM----APVPPGPPMAR 329
PG+ + P P PG + P+PP P A +PP PP+ A +P PP+ P+PP P A
Sbjct: 916 PGAGIPPPPPLPGAGILPLPPLPG-AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAG 974
Query: 330 VPPGPPM--ARVPPGPPM--APLPPGPPM--APLPPGPPM--APLPPGPPM--APLPPRS 379
+PP PP+ A +PP PP+ A +PP PP+ A +PP PP+ A +PP PP+ A +PP
Sbjct: 975 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1034
Query: 380 HVPHTGLAP 388
+P G+ P
Sbjct: 1035 PLPGAGIPP 1043
Score = 103 bits (258), Expect = 2e-22
Identities = 66/162 (40%), Positives = 89/162 (54%), Gaps = 22/162 (13%)
Query: 241 LPRPPVLPVPPMPPRPPM----VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP+ +P PP P A +PP P+P G+ + P PP PR+ PP
Sbjct: 1096 IPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPRVGIPPP 1154
Query: 297 WP-PMAPVPPWPPM--APVPTGPPM--APVPPGPPM--ARVPPGPPM--ARVPPGPPM-- 345
P P A +PP PP+ A +P PP+ +PP PP+ +PP PP+ A +PP PP+
Sbjct: 1155 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPG 1214
Query: 346 -----APLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVP 382
AP PP PP P PP+ P+ GPP+ P S +P
Sbjct: 1215 MGIPPAPAPPLPPPGTGIPPPPLLPV-SGPPLLPQVGSSTLP 1255
Score = 95.1 bits (235), Expect = 1e-19
Identities = 65/162 (40%), Positives = 85/162 (52%), Gaps = 20/162 (12%)
Query: 241 LPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMA-PVPPGSRMAPVPP--GPRMAPVPPW 297
+P PP LP P + M P PP P+P M P P + + PP G M P PP
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPP-PPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPP 913
Query: 298 P-PMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPM--ARVPPGPPM----APLPP 350
P P A +PP PP+ G + P+PP P A +PP PP+ A +PP PP+ PLPP
Sbjct: 914 PLPGAGIPPPPPL----PGAGILPLPP-LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPP 968
Query: 351 GPPMAPLPPGPPM--APLPPGPPM--APLPPRSHVPHTGLAP 388
P A +PP PP+ A +PP PP+ A +PP +P G+ P
Sbjct: 969 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1010
Score = 62.8 bits (151), Expect = 5e-10
Identities = 47/133 (35%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 241 LPRPPVLP---VPPMPPRPPM-VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+P PP LP +PP PP P + +P PP P A +PP P+P +PP AP PP
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPG----MGIPP----APAPP 1224
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAP------VPPGPPMARVPPGPPMA------RVPPGPP 344
PP P PP+ PV +GPP+ P +P +PP P G
Sbjct: 1225 LPPPGTGIPPPPLLPV-SGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSR 1283
Query: 345 MAPLPPGPPMAPL 357
P+ P PM PL
Sbjct: 1284 KQPIEPCRPMKPL 1296
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/182 (26%), Positives = 61/182 (33%), Gaps = 35/182 (19%)
Query: 241 LPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVP-----------PGSRMAPVPPGP 289
L PPV +P PP PP P+ + P P ++ PP P
Sbjct: 755 LTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPP 814
Query: 290 RMAPVPPWPPMAPVPPWPPMAPVPTGPPMA-----------PVPPGPPMARVPPGPP-MA 337
+ PP T + P PP P P +
Sbjct: 815 SLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLG 874
Query: 338 RVPPGPPMAPLP----PGPPMAPLPPGPP-----MAPLPPGP-PMAPLPPRSHVPHTGLA 387
VPP PP PLP P P +P PP M P PP P P A +PP +P G+
Sbjct: 875 MVPPPPP--PLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGIL 932
Query: 388 PV 389
P+
Sbjct: 933 PL 934
Score = 37.0 bits (84), Expect = 0.032
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 30/121 (24%)
Query: 219 LGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMP-------PRPPMVP----MPPRPPI 267
L G P P + + P LP + P PP+P P PP+ P +PP PP+
Sbjct: 1179 LPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPP-PPL 1237
Query: 268 APM--PPMAPVPPGSRMAPVPPGPRMAPVPPWPP--------------MAPVPPWPPMAP 311
P+ PP+ P GS P P P PP P P+ P PM P
Sbjct: 1238 LPVSGPPLLP-QVGSSTLPTPQVCGFLP-PPLPSGLFGLGMNQDKGSRKQPIEPCRPMKP 1295
Query: 312 V 312
+
Sbjct: 1296 L 1296
Score = 35.0 bits (79), Expect = 0.12
Identities = 65/280 (23%), Positives = 95/280 (33%), Gaps = 48/280 (17%)
Query: 113 PPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERL 172
P + V G AE +TA G Q +R ++ +F ++ D+++ +
Sbjct: 149 PAEARVGGRPIAEDVETAAGAQDGQRTSSGSDT-------DIYSFHSATEQEDLLSDIQQ 201
Query: 173 AARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRNTA---TADLAHP-----LDMFL----G 220
A RL + + Q Q + + ++ Q++ A TA P LD FL G
Sbjct: 202 AIRL---QQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLLGPSG 258
Query: 221 GAYYAAPALDPALCVHLVPQLPRPPVLPV--PPMPPRPPMVPMPPRPPIAPMPPMAPVPP 278
GA A + D + + LP P PP P +P+ P + P A P
Sbjct: 259 GAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSP 318
Query: 279 GSRMAPVP---PGPRMAPVP-----------------PWPPMAPVPPWPPMAPVPTGPPM 318
S P P PG A P P +P W P V P
Sbjct: 319 SSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAP--EVGEDAPQ 376
Query: 319 APVPPGPPMARVPPGPPMARVP--PGPPMAPLPPGPPMAP 356
A+ P P A +P P P P P + P
Sbjct: 377 RLGEEPEEEAQGPDAPAAASLPGSPAPSQRCFKPYPLITP 416
Score = 30.8 bits (68), Expect = 2.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 95 EQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQP 135
+QQQ++ L+L+Q+Q+ Q ++G + P TA PQP
Sbjct: 206 QQQQQQQLQLQLQQQQQ---QQQLQGAEEPAAPPTAVSPQP 243
>gi|14249119 Rhox homeobox family, member 2 [Homo sapiens]
Length = 288
Score = 116 bits (291), Expect = 3e-26
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 21 EDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENNVGTEGSVPSDDQD-----RE 75
+D +E+ D V SL E+EE+ + +PE GT A + + G+ +++D ++
Sbjct: 20 DDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGEEKD 79
Query: 76 GGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQP 135
GGG P E E +E + E+ P PQ A G G +P
Sbjct: 80 GGGAGVPGHLWEGDL----EGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVG-----GLEP 130
Query: 136 PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWK 195
++ AFT QLQELE F Q+P R RLA +N+TE VQ+WF+NRRAKW+
Sbjct: 131 GNAQQPNVHAFTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWR 190
Query: 196 RNQRVLMLRN-----------TATADLAHPLDMFLGGA---YYAAPALDPALCVHLVPQL 241
R+QR LM RN TA A +F+ G Y+ + +LC + P
Sbjct: 191 RHQRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPM-PPF 249
Query: 242 PRPPVLPVPPM--PPRPP 257
P PP LP+P M PP PP
Sbjct: 250 P-PPSLPLPLMLLPPMPP 266
Score = 28.9 bits (63), Expect = 8.7
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 302 PVPPWPPMAPVPTGP-PMAPVPPGPPMARVPPGP-PMARVP 340
P+PP+PP P+ P P+ +PP PP + GP P VP
Sbjct: 245 PMPPFPP----PSLPLPLMLLPPMPPAGQAEFGPFPFVIVP 281
>gi|153791494 Rhox homeobox family, member 2B [Homo sapiens]
Length = 288
Score = 115 bits (289), Expect = 5e-26
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 21 EDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENNVGTEGSVPSDDQD-----RE 75
+D +E+ D V SL E+EE+ + +PE GT A + + G+ +++D ++
Sbjct: 20 DDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGEEKD 79
Query: 76 GGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQP 135
GGG P E E +E + E+ P PQ A G G +P
Sbjct: 80 GGGAGVPGHLWEG----NLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVG-----GLEP 130
Query: 136 PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWK 195
++ AFT QLQELE F Q+P R RLA +N+TE VQ+WF+NRRAKW+
Sbjct: 131 GNAQQPNVHAFTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWR 190
Query: 196 RNQRVLMLRN-----------TATADLAHPLDMFLGGA---YYAAPALDPALCVHLVPQL 241
R+QR LM RN TA A +F+ G Y+ + +LC + P
Sbjct: 191 RHQRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPM-PPF 249
Query: 242 PRPPVLPVPPM--PPRPP 257
P PP LP+P M PP PP
Sbjct: 250 P-PPSLPLPLMLLPPMPP 266
Score = 28.9 bits (63), Expect = 8.7
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 302 PVPPWPPMAPVPTGP-PMAPVPPGPPMARVPPGP-PMARVP 340
P+PP+PP P+ P P+ +PP PP + GP P VP
Sbjct: 245 PMPPFPP----PSLPLPLMLLPPMPPAGQAEFGPFPFVIVP 281
>gi|23943886 Rhox homeobox family, member 1 [Homo sapiens]
Length = 184
Score = 109 bits (273), Expect = 4e-24
Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 35/160 (21%)
Query: 51 PEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQ 110
PE G EN + +G + + GGG EP QQ + PP
Sbjct: 50 PEGGVNHENGMNRDGGMIPEG----GGGNQEPRQQPQPPP-------------------- 85
Query: 111 EEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARE 170
EEP Q +EGPQP E QP R RRT FT Q++ELE+ F +QYPDV R
Sbjct: 86 EEPAQAAMEGPQP-------ENMQP----RTRRTKFTLLQVEELESVFRHTQYPDVPTRR 134
Query: 171 RLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRNTATAD 210
LA L +TED+V+VWF+N+RA+ +R+QR LML N AD
Sbjct: 135 ELAENLGVTEDKVRVWFKNKRARCRRHQRELMLANELRAD 174
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 104 bits (259), Expect = 2e-22
Identities = 70/197 (35%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 232 ALCVHLVPQLP-RPPVLPVPPMP-------PRPPM-----VPMPPRPPIAPMPPMA---- 274
A + + P +P R PV P PP+P P PP P PP PP P PP+
Sbjct: 558 AAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 617
Query: 275 -----PVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMAR 329
+P G+ ++P PP A +PP PP+ P + +P G + P PP P AR
Sbjct: 618 ISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSAR 677
Query: 330 VPPGPP----MARVPPGPPMAP----LPPGPPMAPLPPG-PPMAPLPPGPPMAPLPPRSH 380
+PP PP A +PP PP P +PP PP P PG PP P P GP + P PP
Sbjct: 678 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 737
Query: 381 VPHTGLAPVHITWAPVI 397
+P + APV+
Sbjct: 738 MPPPPPFGFGVPAAPVL 754
Score = 92.4 bits (228), Expect = 6e-19
Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 227 PALDPALCVHLVPQLPRPPVL-PVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPV 285
P L +C+ P LP + P PP+ + P PP P +P + +P G+ + P
Sbjct: 610 PPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP 669
Query: 286 PPGPRMAPVPPWPPMAP----VPPWPPMAPVPTG--PPMAPVPPGPPMARVPPGPPMARV 339
PP P A +PP PP P +PP PP P G PP P+P GP +PP PP
Sbjct: 670 PPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPG---IPPPPPF--- 723
Query: 340 PPGPPMAPLPPGPPMAPLPP---GPPMAPLPP 368
P GP + P PPG M P PP G P AP+ P
Sbjct: 724 PGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 104 bits (259), Expect = 2e-22
Identities = 70/197 (35%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 232 ALCVHLVPQLP-RPPVLPVPPMP-------PRPPM-----VPMPPRPPIAPMPPMA---- 274
A + + P +P R PV P PP+P P PP P PP PP P PP+
Sbjct: 567 AAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 626
Query: 275 -----PVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMAR 329
+P G+ ++P PP A +PP PP+ P + +P G + P PP P AR
Sbjct: 627 ISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSAR 686
Query: 330 VPPGPP----MARVPPGPPMAP----LPPGPPMAPLPPG-PPMAPLPPGPPMAPLPPRSH 380
+PP PP A +PP PP P +PP PP P PG PP P P GP + P PP
Sbjct: 687 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 746
Query: 381 VPHTGLAPVHITWAPVI 397
+P + APV+
Sbjct: 747 MPPPPPFGFGVPAAPVL 763
Score = 92.4 bits (228), Expect = 6e-19
Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 227 PALDPALCVHLVPQLPRPPVL-PVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPV 285
P L +C+ P LP + P PP+ + P PP P +P + +P G+ + P
Sbjct: 619 PPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP 678
Query: 286 PPGPRMAPVPPWPPMAP----VPPWPPMAPVPTG--PPMAPVPPGPPMARVPPGPPMARV 339
PP P A +PP PP P +PP PP P G PP P+P GP +PP PP
Sbjct: 679 PPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPG---IPPPPPF--- 732
Query: 340 PPGPPMAPLPPGPPMAPLPP---GPPMAPLPP 368
P GP + P PPG M P PP G P AP+ P
Sbjct: 733 PGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 764
>gi|14249388 retina and anterior neural fold homeobox 2 [Homo
sapiens]
Length = 184
Score = 103 bits (258), Expect = 2e-22
Identities = 66/153 (43%), Positives = 80/153 (52%), Gaps = 34/153 (22%)
Query: 123 PAEGPQTAEG------PQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARL 176
P EGP T G P ++ RR RT FT +QL +LE F+ S YPDV +RE LAA++
Sbjct: 5 PGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKV 64
Query: 177 NLTEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVH 236
+L E RVQVWFQNRRAKW+R +R + G AAP L A
Sbjct: 65 HLPEVRVQVWFQNRRAKWRRQER-----------------LESGSGAVAAPRLPEA---- 103
Query: 237 LVPQLP--RPPVLPVPPMP---PRPPMVPMPPR 264
P LP RPP + +P P P PP VP PR
Sbjct: 104 --PALPFARPPAMSLPLEPWLGPGPPAVPGLPR 134
Score = 30.0 bits (66), Expect = 3.9
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Query: 329 RVPPGP--PMARVPPGPPMAPLPPGPPMAPLPPGPPMAP--LPPGPPM-APLPPRSHVP 382
R+P P P AR PP LP P + P PP P P L PGP + A P + P
Sbjct: 99 RLPEAPALPFAR----PPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAP 153
>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 99.0 bits (245), Expect = 7e-21
Identities = 75/223 (33%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 74 REGGGGHEPEQQ----QEEPPLTKPEQQQEEPPL------LELKQEQEEPPQTTVEGPQP 123
+EG GH Q +E L +PE + + L +K+ + PQ P
Sbjct: 140 QEGSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLP 199
Query: 124 AEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRV 183
+ + A+ +KRR RT FT +QL+ELE F ++ YPDV ARE+LA R +LTE RV
Sbjct: 200 SP-LEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARV 258
Query: 184 QVWFQNRRAKWKRNQRVLMLRNTAT-ADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP 242
QVWFQNRRAKW++ +R ++ T A+ L + YA Q+
Sbjct: 259 QVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYA--------------QIQ 304
Query: 243 RPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPV 285
P L P +P P A M P A PPGS + V
Sbjct: 305 NPSWLGNNGAASPVPACVVPCDPVPACMSPHAH-PPGSGASSV 346
>gi|239754062 PREDICTED: orthopedia homeobox [Homo sapiens]
Length = 325
Score = 98.6 bits (244), Expect = 9e-21
Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 120 GPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLT 179
GPQ P A Q ++++R RT FT QL ELE F ++ YPD+ RE LA R+ LT
Sbjct: 85 GPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLT 144
Query: 180 EDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHP-LDMFLGGAYYAAPALDPALC---- 234
E RVQVWFQNRRAKWK+ ++ + L P L F A AA A+ +LC
Sbjct: 145 ESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLPQFPSAAAAAAAAMGDSLCSFHA 204
Query: 235 ---------VHLVPQLPRPPVL 247
+ V QLP PP L
Sbjct: 205 NDTRWAAAAMPGVSQLPLPPAL 226
>gi|14149760 orthopedia homeobox [Homo sapiens]
Length = 325
Score = 98.6 bits (244), Expect = 9e-21
Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 120 GPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLT 179
GPQ P A Q ++++R RT FT QL ELE F ++ YPD+ RE LA R+ LT
Sbjct: 85 GPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLT 144
Query: 180 EDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHP-LDMFLGGAYYAAPALDPALC---- 234
E RVQVWFQNRRAKWK+ ++ + L P L F A AA A+ +LC
Sbjct: 145 ESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLPQFPSAAAAAAAAMGDSLCSFHA 204
Query: 235 ---------VHLVPQLPRPPVL 247
+ V QLP PP L
Sbjct: 205 NDTRWAAAAMPGVSQLPLPPAL 226
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 98.2 bits (243), Expect = 1e-20
Identities = 62/143 (43%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 244 PPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPV 303
PP P PPRPP+ P P P P PP +PP P+ P PP P + P
Sbjct: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPP-----PLAGPPNRGDRPPPPVLFPG 281
Query: 304 PPW--PPMAPVPTGPPMAPVPP-GPPMARVPP--GPPMARVPPGPPMAPLPPGPPMAPLP 358
P+ PP+ P+P GPP PVP GPP PP GPP PP P P PPGP PL
Sbjct: 282 QPFGQPPLGPLPPGPP-PPVPGYGPPPGPPPPQQGPP----PPPGPFPPRPPGPLGPPLT 336
Query: 359 PGPPMAPLPPGPPMAPLPPRSHV 381
PP P PGPP PP HV
Sbjct: 337 LAPP--PHLPGPPPGAPPPAPHV 357
Score = 81.3 bits (199), Expect = 1e-15
Identities = 60/162 (37%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
Query: 242 PRPPVLPV-PPMPPRPP----MVPMP----------PRPPIA------PMPPMAPVPPGS 280
PRPP+ P PP PP PP ++P P P PP+ PP+ P+PPG
Sbjct: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG- 295
Query: 281 RMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVP----PGPPM 336
P PP P P PP PP P PP P PP P P GPP+ P PGPP
Sbjct: 296 ---PPPPVPGYGP-PPGPPPPQQGPPPPPGPF---PPRPPGPLGPPLTLAPPPHLPGPPP 348
Query: 337 ARVPPGPPMAP-LPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
PP P + P P P + +P P PP P PP
Sbjct: 349 GAPPPAPHVNPAFFPPPTNSGMPTSDSRGP-PPTDPYGRPPP 389
Score = 78.6 bits (192), Expect = 1e-14
Identities = 64/156 (41%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 238 VPQLPRPPVLPVPPMPPRP-PMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
VP R P P PP P P PPRPP+ P P PPG PPGP
Sbjct: 211 VPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGP-----PGPPG------PPGP------- 252
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVP---PGPPMARVPPGPPMARVPPGPPMAPLPP-GP 352
PP V P PP+A P P P PG P + P GP +PPGPP P+P GP
Sbjct: 253 -PPPGQVLP-PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP----LPPGPP-PPVPGYGP 305
Query: 353 PMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAP 388
P P PP P P PP P P PP P LAP
Sbjct: 306 P--PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP 339
Score = 61.6 bits (148), Expect = 1e-09
Identities = 43/110 (39%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 238 VPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPW 297
VP PP P P P PP P PPRPP PP+ PP P PGP PP
Sbjct: 300 VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP-----PHLPGPPPGAPPPA 354
Query: 298 PPMAPV--PPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPM 345
P + P PP P + +PT P PP P R PP PPG M
Sbjct: 355 PHVNPAFFPP-PTNSGMPTSDSRGP-PPTDPYGRPPPYDRGDYGPPGREM 402
Score = 39.7 bits (91), Expect = 0.005
Identities = 32/85 (37%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 313 PTGPPMAPVPPGPP-MARVPPGPPMARVPPGPPMA-----PLPPG--PPMAPL-PPGPPM 363
P G A P G R P P PGP P P G PP PL PPGPP
Sbjct: 189 PGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPG 248
Query: 364 APLPPGPPMAPLPPRSHVPHTGLAP 388
P PP P PP + P+ G P
Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRP 273
Score = 28.9 bits (63), Expect = 8.7
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 76 GGGGHEPEQQQEEPPLTKPEQQQEE--PPLLELKQEQEEPPQTTVE--GPQPAEGPQTAE 131
G G P Q PPL P + + PP+L Q +PP + P P G
Sbjct: 248 GPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPP 307
Query: 132 GPQPPER 138
GP PP++
Sbjct: 308 GPPPPQQ 314
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 96.7 bits (239), Expect = 3e-20
Identities = 61/142 (42%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWP 298
PQ P + PPMP PP+ P PP PP+ P P +PPG P P P P P
Sbjct: 394 PQSVPPSQIQAPPMPGPPPLGP-PPAPPLRPPGPPTGLPPG----PPPGAPPFLRPPGMP 448
Query: 299 PM-APVPPWPPMAPVPTGPPMAP--VPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMA 355
+ P+P P P P PP P PPG P P GPP PP PP P PP P M
Sbjct: 449 GLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIP-PPRPGMM 507
Query: 356 PLPPGPPMAPLPPGP-PMAPLP 376
P PP+ P PPG P APLP
Sbjct: 508 RPPLVPPLGPAPPGLFPPAPLP 529
Score = 90.9 bits (224), Expect = 2e-18
Identities = 58/126 (46%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 272 PMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPV---PPGPPMA 328
P VPP AP PGP PP PP+ P P PP P PP AP PPG P
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRP--PGPPTGLPPGPPPGAPPFLRPPGMPGL 450
Query: 329 R------VPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVP 382
R +PPGPP R PPGPP P PPG P P P GPP PP PP P PPR +
Sbjct: 451 RGPLPRLLPPGPPPGR-PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIP-PPRPGMM 507
Query: 383 HTGLAP 388
L P
Sbjct: 508 RPPLVP 513
Score = 89.0 bits (219), Expect = 7e-18
Identities = 63/139 (45%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 239 PQLPRPPVLPVPPMPP-RPPMVP--MPPRPPIAPMPPMAPVP-PGSR------MAPVPPG 288
P +P PP L PP PP RPP P +PP PP P + P PG R + P PP
Sbjct: 405 PPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPP 464
Query: 289 PRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPL 348
R PP PP P PP P P PP P PPG P PP P M R P PP+ P
Sbjct: 465 GRPPGPPPGPPPGLPPGPPPRGPPPRLPP--PAPPGIP----PPRPGMMRPPLVPPLGPA 518
Query: 349 PPGP-PMAPLP-PGPPMAP 365
PPG P APLP PG AP
Sbjct: 519 PPGLFPPAPLPNPGVLSAP 537
Score = 55.5 bits (132), Expect = 9e-08
Identities = 37/90 (41%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 242 PRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPV------PPGPRMAPVP 295
P P +LP P P RPP P P P + P PP PP R+ P PP P M P
Sbjct: 453 PLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP--RLPPPAPPGIPPPRPGMMRPP 510
Query: 296 PWPPMAPVPP--WPPMAPVPTGPPMAPVPP 323
PP+ P PP +PP AP+P P + PP
Sbjct: 511 LVPPLGPAPPGLFPP-APLP-NPGVLSAPP 538
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 227 PALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAP-MPPMAPVPPGSRMAPV 285
P P L P+ P PP LP P P PP P RPP+ P + P PPG P
Sbjct: 472 PGPPPGLPPGPPPRGP-PPRLPPPAPPGIPPPRPGMMRPPLVPPL---GPAPPG-LFPPA 526
Query: 286 P-PGPRMAPVPP 296
P P P + PP
Sbjct: 527 PLPNPGVLSAPP 538
Score = 33.9 bits (76), Expect = 0.27
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 14/83 (16%)
Query: 269 PMPPMAPVPPGSRMAPVP-PGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPM 327
P+P M P + +P PG + PP GPP V P +
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQ-------------PPSILKKTSAYGPPTRAVSILPLL 186
Query: 328 ARVPPGPPMARVPPGPPMAPLPP 350
P P R PPGPP P PP
Sbjct: 187 GHGVPRLPPGRKPPGPPPGPPPP 209
Score = 33.9 bits (76), Expect = 0.27
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 51 PEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQ 110
PE G E E + SDD + E + +++ + QQ+ PP +
Sbjct: 343 PEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402
Query: 111 EEPPQTTVE--GPQPA-----EGPQTAEGPQPP 136
+ PP GP PA GP T P PP
Sbjct: 403 QAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPP 435
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/71 (28%), Positives = 26/71 (36%)
Query: 308 PMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLP 367
P+ +P P + P PP GPP + P + P P P
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKP 199
Query: 368 PGPPMAPLPPR 378
PGPP P PP+
Sbjct: 200 PGPPPGPPPPQ 210
Score = 31.2 bits (69), Expect = 1.8
Identities = 21/70 (30%), Positives = 25/70 (35%)
Query: 299 PMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLP 358
P+ +P P + P PP GPP V P + P P P
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKP 199
Query: 359 PGPPMAPLPP 368
PGPP P PP
Sbjct: 200 PGPPPGPPPP 209
Score = 29.6 bits (65), Expect = 5.1
Identities = 22/77 (28%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 247 LPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPW 306
+P+P MP P + I +P PP GP V P + P
Sbjct: 139 IPLPDMPHAPSNIL------IQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPR 192
Query: 307 PPMAPVPTGPPMAPVPP 323
P P GPP P PP
Sbjct: 193 LPPGRKPPGPPPGPPPP 209
Score = 29.3 bits (64), Expect = 6.7
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 40/163 (24%)
Query: 123 PAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDR 182
P + PQ E +RK+ R T +L E EN PD+ R +
Sbjct: 67 PVQQPQLNEKVLKDKRKKLRETFERILRLYEKEN-------PDIYKELR----------K 109
Query: 183 VQVWFQNRRAKWK------RNQRVLMLRNTATADLAHP------LDMFLGGAYYAAPAL- 229
++V ++ +RA+ +N + + + + D+ H D+ L GA P++
Sbjct: 110 LEVEYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIPLPGAQ--PPSIL 167
Query: 230 -------DPALCVHLVPQLPRP-PVLPVPPMPPRPPMVPMPPR 264
P V ++P L P LP PP PP P PP+
Sbjct: 168 KKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPGPPPGPPPPQ 210
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 95.9 bits (237), Expect = 6e-20
Identities = 89/287 (31%), Positives = 112/287 (39%), Gaps = 78/287 (27%)
Query: 55 TEAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQ---- 110
T E +G G P GG G E + EE L E + EE LLE +E+
Sbjct: 199 THPEERLGVAGG-PGSAPAAGGGTGTEDD---EEELLEDEEDEDEEEELLEDDEEELLED 254
Query: 111 ------EEPPQTTV----------------EGPQ--PAEG----PQTAEGPQPPE----- 137
+EP + V EG + P E P+ AEG +
Sbjct: 255 DARALLKEPRRCPVAATGAVAAAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLS 314
Query: 138 ------------RKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQV 185
++RR RT FT +QL+ELE F ++ YPDV RE LA RL+LTE RVQV
Sbjct: 315 AGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQV 374
Query: 186 WFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPP 245
WFQNRRAKW++ ++ HP + P P H P P
Sbjct: 375 WFQNRRAKWRKREK--------AGAQTHPPGL---------PFPGPLSATH-----PLSP 412
Query: 246 VLPVPPMPPRPPMVP---MPPRPPIAPMPPMAPVPPGSRMAPVPPGP 289
L P PP P + A P P PPGS P P
Sbjct: 413 YLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPPSGAP 459
Score = 29.6 bits (65), Expect = 5.1
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 13/65 (20%)
Query: 322 PPGPPMARVPPGPPMARVPPGPPM--APLPPGPPM-------APLPPGPPMAPLPPGPPM 372
PPG P PGP A P P + +P PP P A LPP P
Sbjct: 395 PPGLPF----PGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGS 450
Query: 373 APLPP 377
A LPP
Sbjct: 451 ASLPP 455
>gi|4557489 cone-rod homeobox protein [Homo sapiens]
Length = 299
Score = 95.9 bits (237), Expect = 6e-20
Identities = 84/262 (32%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 118 VEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLN 177
+ GP Q P P ++RR RT FT+ QL+ELE F ++QYPDV ARE +A ++N
Sbjct: 18 LSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKIN 77
Query: 178 LTEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHL 237
L E RVQVWF+NRRAK ++ ++ + GG A PA A
Sbjct: 78 LPESRVQVWFKNRRAKCRQQRQQQKQQQQPP-----------GGQAKARPAKRKA----- 121
Query: 238 VPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPW 297
PRP + P P + PP+ P P GS P +A V W
Sbjct: 122 -GTSPRPST----DVCPDPLGISDSYSPPL-------PGPSGS------PTTAVATVSIW 163
Query: 298 PPM--APVPPWPPMAPVPTGPPMAPVPPGPPMARVPP--GPPMARVPPGPPMAPLPPG-P 352
P +P+P V +GP + P A P A P + L P
Sbjct: 164 SPASESPLPEAQRAGLVASGPSLTSAPYAMTYAPASAFCSSPSAYGSPSSYFSGLDPYLS 223
Query: 353 PMAPLPPGPPMAPLPPGPPMAP 374
PM P GP ++PL GP + P
Sbjct: 224 PMVPQLGGPALSPL-SGPSVGP 244
>gi|7706659 paired related homeobox 2 [Homo sapiens]
Length = 253
Score = 95.1 bits (235), Expect = 1e-19
Identities = 63/174 (36%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 121 PQPAEGPQTAEGPQPPERK--RRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNL 178
PQ E P G +K RR RT F QLQ LE F+ + YPD RE LA R+NL
Sbjct: 84 PQDGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNL 143
Query: 179 TEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLV 238
+E RVQVWFQNRRAK++RN+R ++ +A+ L +Y A++
Sbjct: 144 SEARVQVWFQNRRAKFRRNERAMLASRSAS----------LLKSYSQEAAIEQ------- 186
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMA 292
P PRP L P + P + +PP +P G P PG MA
Sbjct: 187 PVAPRPTAL-------SPDYLSWTASSPYSTVPPYSPGSSG----PATPGVNMA 229
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 93.6 bits (231), Expect = 3e-19
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 227 PALDPALCVHLVPQLPRPPVLPVPPMPPR-PPMVPMPP--RPPIAPM-PPMAPVPPGSRM 282
P PAL + LP PP+ P+ PP+ PP + +PP PP P PP++P+ S
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 283 APVPPGPRMAPVPPWPPMAPV-------PPWPPMAPVPTGPPMAPVPPGPPMARVPPGPP 335
AP + P PP +P P PP++P T P AP P +VPP PP
Sbjct: 652 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 336 MARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAPV 389
+ PPM+P PP AP P P +PP PP +P S P + P+
Sbjct: 712 AS-----PPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPL 760
Score = 87.4 bits (215), Expect = 2e-17
Identities = 59/166 (35%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 226 APALDPALCVHLVPQLPRPPVLPVPPM--PPRPPMVPMPPRPPIAPMPPMAPVPPGSRMA 283
+P P + P PP L PP+ PP PP PP P A PP AP P +
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA--SPPMSPSATPPPQAPPPLAAPPL 735
Query: 284 PVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGP 343
VPP P P PPM+P T PP P P +VPP PP A +P P
Sbjct: 736 QVPPSP--------------PASPPMSPSATPPPRVPPLLAAPPLQVPPSPP-ASLPMSP 780
Query: 344 PMAPLPPGPPMAPLPPGPPMAPLPPG--PPMAPLPPRSHVPHTGLA 387
P P PP PP + P PP P AP P + +P + LA
Sbjct: 781 LAKPPPQAPPALATPPLQAL-PSPPASFPGQAPFSPSASLPMSPLA 825
Score = 85.1 bits (209), Expect = 1e-16
Identities = 68/190 (35%), Positives = 86/190 (45%), Gaps = 35/190 (18%)
Query: 225 AAPALDPALCVHLVPQLPRP---PVLPVPPMPPR----------PPMVP---------MP 262
A+P + P+ PQ P P P L VPP PP PP VP +P
Sbjct: 712 ASPPMSPSATPP--PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP 769
Query: 263 PRPPIA-PMPPMAPVPPGSRMAPVPPGPRMAPVPP--WPPMAPVPPWP--PMAPVPTGPP 317
P PP + PM P+A PP + A P + P PP +P AP P PM+P+ T PP
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 318 MAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
AP P+ +VPP PP + P P PGP + P +A L PGPP PP
Sbjct: 830 QAPPVLAAPLLQVPPSPPASPTLQAPRRPP-TPGPDTSVSGPRLTLA-LAPGPP----PP 883
Query: 378 RSHVPHTGLA 387
S P + L+
Sbjct: 884 PSRSPSSTLS 893
Score = 82.0 bits (201), Expect = 9e-16
Identities = 67/186 (36%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 239 PQLPRPPVLPVPPMPPR-PPMVPMPPRPPIAPMPPMAP---VPPGSRMAP-----VPPGP 289
P L PP L VPP PP PPM P PP AP P AP VPP +P P P
Sbjct: 697 PSLAAPP-LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP 755
Query: 290 RMAP--------VPPWPPM-APVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMA--- 337
R+ P VPP PP PM+P+ PP AP P + P PP +
Sbjct: 756 RVPPLLAAPPLQVPPSPPASL------PMSPLAKPPPQAPPALATPPLQALPSPPASFPG 809
Query: 338 RVPPGP----PMAPLPPGPPMAPLPPGPPMAPLPPGPP-----MAPLPPRSHVPHTGLAP 388
+ P P PM+PL PP AP P+ +PP PP AP P + P T ++
Sbjct: 810 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 869
Query: 389 VHITWA 394
+T A
Sbjct: 870 PRLTLA 875
Score = 77.4 bits (189), Expect = 2e-14
Identities = 59/194 (30%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 225 AAPALDPALCVHLVPQLPRPPVLPVPPM-----PPRPPMVPMPPRPPIAPMPPMAPVPPG 279
A P+L P L P L PP+ P P + PP P AP P AP P
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCP--APCPLQAPPSPL 576
Query: 280 SRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARV 339
+ P P P P PP PP + P P P P PP +PP
Sbjct: 577 TTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSP 636
Query: 340 PPGPPMAPLPPGPPMAP-------------LPPGPPM-APL--PPGPPMAP--LPPRSHV 381
P PP++PL P AP PP PP+ AP P PP++P PP
Sbjct: 637 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 696
Query: 382 PHTGLAPVHITWAP 395
P P+ + +P
Sbjct: 697 PSLAAPPLQVPPSP 710
Score = 75.9 bits (185), Expect = 6e-14
Identities = 60/191 (31%), Positives = 75/191 (39%), Gaps = 25/191 (13%)
Query: 204 RNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPP-----RPPM 258
R +A L P L + A P PA PR P P P P RPP
Sbjct: 227 RPSAGGGLQRPASRSLSSS--ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
Query: 259 VPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPM 318
V PPR AP + P+ P P G + PVPP P P+P
Sbjct: 285 VT-PPRKDAAPA--LGPLSSSPLATPSPSGTKARPVPP--------PDNAATPLP----- 328
Query: 319 APVPPGPPMAR-VPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
A +PP PP+A +P PP PP P PP P + PP P+ P + +PP
Sbjct: 329 ATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPP 388
Query: 378 RSHVPHTGLAP 388
VPH+ +P
Sbjct: 389 -IQVPHSLTSP 398
Score = 72.4 bits (176), Expect = 7e-13
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 239 PQLPRPPVLPVPPMPPR----PPMVPMPPR----PPIAPMPPMAPVPPGSRMAPV----- 285
PQ P ++ +PP+ + PP + PP PP+ +P +AP P + AP+
Sbjct: 500 PQAPLSSLI-MPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHL 558
Query: 286 --PPGPRMAPVPPWPPMAPVPPWPPMAP--VPTGPPMAPVP-PGPPMARVPPGP--PMAR 338
PP P AP P P +P+ PP P + T PP AP PP+ +P P P+A
Sbjct: 559 ETPPCP--APCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLAT 616
Query: 339 VPP-GPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAP 388
PP PP LPP P PP++PL P AP H+ +P
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP 667
Score = 68.9 bits (167), Expect = 8e-12
Identities = 60/162 (37%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 225 AAPALDP-ALCVHLVPQLPRPPVLPVPPMPPRP-PMVPMPPRPPIAP----MPPMA--PV 276
A+P + P A VP L P L VPP PP PM P+ PP AP PP+ P
Sbjct: 743 ASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802
Query: 277 PPGSRMAPVPPGPR----MAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPP 332
PP S P P M+P+ PP AP P+ VP PP +P P R PP
Sbjct: 803 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP---RRPP 859
Query: 333 GPPMARVPPGPPMA-PLPPGPPMAPLPPGPPMAPLPPGPPMA 373
P GP + L PGPP P P P + L GP +A
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPP--PPPSRSPSSTL-SGPDLA 898
Score = 64.3 bits (155), Expect = 2e-10
Identities = 45/132 (34%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 266 PIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGP 325
P AP P P P G + A PP P + P+ P P P+G PVPP
Sbjct: 263 PRAPAHPSQPKPKGLQ-ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD 321
Query: 326 PMARVPPGPPMARVPPGPPMA-PLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHT 384
A P A +PP PP+A PLP PP PP P PP P + PP P
Sbjct: 322 NAATPLP----ATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPM 377
Query: 385 GLAPVHITWAPV 396
P T P+
Sbjct: 378 QAPPSLQTIPPI 389
Score = 52.4 bits (124), Expect = 7e-07
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 242 PRPPVLPVPPMPPRPPMVPMPPRPPIAPM--PPMAPVPPGSRMAPVPPGPRMAPVPPWPP 299
P P P PP + +P PP+ P ++P+ + P+ +A P P
Sbjct: 444 PSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAP 503
Query: 300 MAPV--PPW-------PPMAPVP----TGPPMAPVPP--GPPM--ARVPPGPPMARVPPG 342
++ + PP PP P T PP+ +P PP+ A P P PP
Sbjct: 504 LSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPC 563
Query: 343 PPMAPLPPGP-PMAPLPPGPPMA---PLPPGPPMAPLPPRSHVPHTGLAPV 389
P PL P P+ PP P + P P PP PP +P L+P+
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPL 614
Score = 47.0 bits (110), Expect = 3e-05
Identities = 51/180 (28%), Positives = 64/180 (35%), Gaps = 34/180 (18%)
Query: 225 AAPALDPALCVHLVPQLPRP----PVLP-----------VPPMPPRPPMVPM-PPRPPIA 268
AAPAL P L P PV P +PP PP +P+ PP P
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Query: 269 PMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGP--- 325
P P PP + + PP P+ P + +P P P P PP P
Sbjct: 352 PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP--PIQVPHSLTSPSLQAPPSPLAL 409
Query: 326 --PMARVPPGPPMAR-------VPPGPPMAPL-PPGPPMAPLPPGPPM-AP--LPPGPPM 372
A G P + + P A L P P + P PP+ AP LP PP+
Sbjct: 410 SSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPL 469
Score = 41.2 bits (95), Expect = 0.002
Identities = 54/222 (24%), Positives = 74/222 (33%), Gaps = 50/222 (22%)
Query: 226 APALDPALCVHLVPQLPRPPVLP---VPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRM 282
+P+ P+L LP PP P PP PPM P I P+ + S
Sbjct: 347 SPSAPPSL-----QTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Query: 283 APVPP-------------GPRMAPVPPWPPMAP-------VPPWPPMAPVPTGPPM-AP- 320
AP P P + + M+P P P + P PP+ AP
Sbjct: 402 APPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPL 461
Query: 321 -VPPGPPM-----ARVPPGPPMARVPPGPPMAPLPPGPPMAPL-----PP-------GPP 362
+P PP+ V P + P ++ L P APL PP PP
Sbjct: 462 SLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPP 521
Query: 363 MAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAPVINSYYACP 404
PP PP ++P P+ AP+ + P
Sbjct: 522 SLQTPPA--SLTTPPLENLPSLAPPPLQTASAPLTTPHLETP 561
Score = 32.0 bits (71), Expect = 1.0
Identities = 30/105 (28%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 242 PRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVP-PGPRMAPVPPWPPM 300
PRPP P PP P P + + P+A G A +P PR P
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTS 86
Query: 301 APVPPWPPMAP--VPTGPPMAPVPPGPPMARVPPGPPMARVPPGP 343
+ P P A PP PGP + PG PGP
Sbjct: 87 SRNPASRPPASGRGERAPPAKNTSPGPVSS---PGRASGTTRPGP 128
Score = 30.8 bits (68), Expect = 2.3
Identities = 27/104 (25%), Positives = 33/104 (31%), Gaps = 3/104 (2%)
Query: 261 MPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
+ PRPP +P PP P R+ P+ P AP A
Sbjct: 25 LTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAG 84
Query: 321 VPPGPPMARVPPGPPMARVPPGPPMAPLP---PGPPMAPLPPGP 361
P +R P R PP +P P PG PGP
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP 128
>gi|169881277 PROP paired-like homeobox 1 [Homo sapiens]
Length = 226
Score = 92.8 bits (229), Expect = 5e-19
Identities = 72/212 (33%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 93 KPEQQQEEPPLLELKQEQEEPPQTTVEGPQP-------AEGPQTAEGPQP-----PERKR 140
KP++ + LL + P TTV+ P A G ++ PQ P +R
Sbjct: 11 KPKKGRVGSNLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRR 70
Query: 141 RRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRV 200
R RT F+ QL++LE+ F +QYPD+ ARE LA L+E R+QVWFQNRRAK ++ +R
Sbjct: 71 RHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERS 130
Query: 201 LM--LRNTATADLAHPLDMFLGGAY-YAAPALDPALCV-----HLVPQLPR--------- 243
L+ L + + A + L Y YAAP P C H +P P
Sbjct: 131 LLQPLAHLSPAAFSSFLPESTACPYSYAAPP-PPVTCFPHPYSHALPSQPSTGGAFALSH 189
Query: 244 ------PPVLPVP----PMPPRPPMVPMPPRP 265
P + P P P PP PPM+P+ P
Sbjct: 190 QSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEP 221
>gi|113204604 aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 92.4 bits (228), Expect = 6e-19
Identities = 58/137 (42%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 127 PQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVW 186
P + E + +KRR RT F+ FQL+ELE F ++ YPDV ARE+LA R +LTE RVQVW
Sbjct: 141 PDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVW 200
Query: 187 FQNRRAKWKRNQRVLML---RNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPR 243
FQNRRAKW++ +R + RN TA D+ + + P L +L P
Sbjct: 201 FQNRRAKWRKRERYGKIQEGRNPFTA----AYDISVLPRTDSHPQLQNSLWASPGSGSPG 256
Query: 244 PPVLPVPPMPPRPPMVP 260
P L P P P M P
Sbjct: 257 GPCLVSPEGIPSPCMSP 273
Score = 36.6 bits (83), Expect = 0.042
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 290 RMAPVP-PWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPL 348
R+ P P P+ PP P P P + P PP GP + R P P+ P
Sbjct: 10 RVGPAPGPYVASGDEPPGPQGTPA-AAPHLHPAPPR--------GPRLTRFPACGPLEPY 60
Query: 349 PPGPPMAPLPPGPPMAPLPPGPPM 372
P P PP + L PGP +
Sbjct: 61 LPEPAK---PPAKYLQDLGPGPAL 81
Score = 34.3 bits (77), Expect = 0.21
Identities = 28/78 (35%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 319 APVPPGPPMARVPPGPPMAR--VPPGPPMAP-----LPPGPPMAP-LPPGPPMAPLPPGP 370
AP GP PGP +A PPGP P L P PP P L P PL P
Sbjct: 7 APFRVGPA-----PGPYVASGDEPPGPQGTPAAAPHLHPAPPRGPRLTRFPACGPLEPYL 61
Query: 371 PMAPLPPRSHVPHTGLAP 388
P PP ++ G P
Sbjct: 62 PEPAKPPAKYLQDLGPGP 79
Score = 33.9 bits (76), Expect = 0.27
Identities = 40/136 (29%), Positives = 47/136 (34%), Gaps = 24/136 (17%)
Query: 253 PPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPP-GPRMAPVPPWPPMAPVPPWPPMAP 311
P P V PP P A P + P PP GPR+ P P+ P P P P
Sbjct: 13 PAPGPYVASGDEPP-GPQGTPAAAP---HLHPAPPRGPRLTRFPACGPLEPYLPEPAKPP 68
Query: 312 VPTGPPMAPVPPGPPM--ARVPPGPPMARVPPGP----PMAPLP------PGPPMAPLPP 359
+ + PGP + GP A P PL GP P
Sbjct: 69 AKY---LQDLGPGPALNGGHFYEGPAEAEEKTSKAASFPQLPLDCRGGPRDGPSNLQGSP 125
Query: 360 GPPMA----PLPPGPP 371
GP +A PL PG P
Sbjct: 126 GPCLASLHLPLSPGLP 141
Score = 32.7 bits (73), Expect = 0.60
Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 244 PPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPP 296
P + P PP PR + P P+ P P PP + + PGP + P
Sbjct: 36 PHLHPAPPRGPR--LTRFPACGPLEPYLPEPAKPPAKYLQDLGPGPALNGGHFYEGPAEA 93
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPP 353
+ +P + G P GP + PGP +A + PL PG P
Sbjct: 94 EEKTSKAASFPQLPLDCRGGPR----DGPSNLQGSPGPCLASL-----HLPLSPGLP 141
Score = 30.8 bits (68), Expect = 2.3
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Query: 310 APVPTGPPMAPVPPGPPMAR--VPPGP---PMA--RVPPGPPMAP-LPPGPPMAPLPPGP 361
AP GP PGP +A PPGP P A + P PP P L P PL P
Sbjct: 7 APFRVGPA-----PGPYVASGDEPPGPQGTPAAAPHLHPAPPRGPRLTRFPACGPLEPYL 61
Query: 362 PMAPLPPGPPMAPLPP 377
P PP + L P
Sbjct: 62 PEPAKPPAKYLQDLGP 77
>gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]
Length = 365
Score = 91.7 bits (226), Expect = 1e-18
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 89 PPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRR-RTAFT 147
P P PP L +Q++ + T+ E Q + P +RK+RR RT FT
Sbjct: 114 PEPAAPLAPSRPPPALG-RQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFT 172
Query: 148 QFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQR 199
QL+ELE F E+ YPDV ARE LA + L EDR+QVWFQNRRAKW++ ++
Sbjct: 173 AHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREK 224
Score = 33.5 bits (75), Expect = 0.35
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 274 APVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPG 333
A VP GS P G + + P P P GP +AP P GP + G
Sbjct: 16 ALVPGGSPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEGPAVAPCP-GPGL----DG 70
Query: 334 PPMAR--VPPG----------PPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
+AR +P G PP A P +A +P PP P P P PP
Sbjct: 71 SSLARGALPLGLGLLCGFGTQPPAAARAPCLLLADVPFLPPRGPEPAAPLAPSRPP 126
Score = 29.3 bits (64), Expect = 6.7
Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 251 PMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMA--PVPPG-PRMAPVPPWPPMAPVPPWP 307
P P P P +AP P P GS +A +P G + PP A P
Sbjct: 44 PAPAGPGQGSGCEGPAVAPCP--GPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCL 101
Query: 308 PMAPVPTGPPMAPVPPGPPMARVPPGPPMAR 338
+A VP PP P P P+A P P + R
Sbjct: 102 LLADVPFLPPRGP-EPAAPLAPSRPPPALGR 131
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 90.9 bits (224), Expect = 2e-18
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPPGSRM------APVPPGP 289
P P P LP P P + P P P++P P PM+P P SR+ +P+ P P
Sbjct: 553 PLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPP 612
Query: 290 RMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLP 349
+P+ P P + + P P +P+ P +P+ P P ++R+ P P ++R+ P P +PL
Sbjct: 613 EESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLS 672
Query: 350 PGPPMAPLPPGPPMAPLPPGP---PMAPLP---PRSHVPHTGLAPVHITWAPVI 397
P P +P P P + L P P P +P P P S P L + + +P++
Sbjct: 673 PPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLL 726
Score = 89.4 bits (220), Expect = 5e-18
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPPGSRMAPVPPGPRMAPVP 295
P P P P+ P P + P P P++P P PM+P P SR++P+P R++P P
Sbjct: 607 PLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPP 666
Query: 296 PWPPMAPVPPWPPMAPVP----TGPPMAPVPPGPPMARVPPGPP-----MARVPPGPPMA 346
P++P P P +P P PP P PP P PP M+ P+
Sbjct: 667 EESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLL 726
Query: 347 PLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHV 381
PLP P + P GP ++P P P ++P P H+
Sbjct: 727 PLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHL 761
Score = 84.7 bits (208), Expect = 1e-16
Identities = 55/177 (31%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPPGSRMAPVPPGPRMAPVP 295
P P P P+ P P + P P++P P P++P P SR++P P M+P P
Sbjct: 580 PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639
Query: 296 PWPPMAPVPPWPPMAPVPT----GPPMAPVPPGPPMARVPPGPP--MARVPPGPPMAPLP 349
PM+P P ++P+P PP P PP P PP +R+ P P +P
Sbjct: 640 EESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTS 699
Query: 350 PGPPMAPLPPGP------------PMAPLPPGPPMAP------LPPRSHVPHTGLAP 388
P P +P P P P+ PLP P + P L PR PH P
Sbjct: 700 PPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRP 756
Score = 83.6 bits (205), Expect = 3e-16
Identities = 53/165 (32%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPM-----------PPRP----PIAPMPPMAPVPPGSRMA 283
P P P P+ P P P P+ PP P P++P P +P+ P +
Sbjct: 493 PLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEES 552
Query: 284 PVPPGPRMAPVPPWPP---MAPVPPWPPMAPVPTGPPMAPVPPG----PPMARVPPGPPM 336
P+ P P P P P ++P P PM+P P PM+P P PP P PP
Sbjct: 553 PLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPP 612
Query: 337 ARVPPGPP-----MAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLP 376
P PP ++P P PM+P P PM+P P ++PLP
Sbjct: 613 EESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLP 657
Score = 83.2 bits (204), Expect = 4e-16
Identities = 74/301 (24%), Positives = 119/301 (39%), Gaps = 23/301 (7%)
Query: 87 EEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAF 146
EE PL+ P ++ P E + PP+ + P P E P + PPE R F
Sbjct: 550 EESPLSPPPEELPTSPPPEASR-LSPPPEESPMSPPPEESPMSP----PPEASR----LF 600
Query: 147 TQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRNT 206
F+ L +ES ++ A+RL+ + + + V L
Sbjct: 601 PPFEESPLSPPPEESP----LSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPL 656
Query: 207 ATADLAHPL--DMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPR 264
P + L +P P L P P P P P P PP
Sbjct: 657 PVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASP----PPE 712
Query: 265 PPIAPMP----PMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
+ +P P+ P+P ++ P GP ++P P P ++P P P ++P P ++P
Sbjct: 713 DSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSP 772
Query: 321 VPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSH 380
P P + VP P ++ GP ++P P ++P P ++P+P P ++P P SH
Sbjct: 773 QPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESH 832
Query: 381 V 381
+
Sbjct: 833 L 833
Score = 81.6 bits (200), Expect = 1e-15
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPPGSRMAPVP------PGP 289
P P P V + P+P + P P P++P P P +P P SR++P P P P
Sbjct: 643 PMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPP 702
Query: 290 RMAPVPPWP------------PMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMA 337
+P P P P+ P+P P + P GP ++P P P ++ P P ++
Sbjct: 703 EDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLS 762
Query: 338 RVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLP------PRSHVPHTGLAP 388
P ++P P P + +P P ++P GP ++P P P++ PH P
Sbjct: 763 PQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVP 819
Score = 80.9 bits (198), Expect = 2e-15
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 242 PRPPVL--PVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPPGSRMAPVPPGPRMAPVPP 296
P P L P+ P P P+ P P++P P P +P P SR++P P M+P P
Sbjct: 527 PPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPE 586
Query: 297 WPPMAP-------VPPWP--PMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAP 347
PM+P PP+ P++P P P++P P ++ P PM+ P PM+P
Sbjct: 587 ESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSP 646
Query: 348 LPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRS 379
P ++PLP ++P P P++P P S
Sbjct: 647 PPEVSRLSPLPVVSRLSPPPEESPLSPPPEES 678
Score = 77.8 bits (190), Expect = 2e-14
Identities = 55/178 (30%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 225 AAPALDPALCVHL---VPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMP---PMAPVPP 278
A L+P L L +P LP P P+ P P P P P ++P P P +P+P
Sbjct: 422 AGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPE 481
Query: 279 G---------SRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGP-PMAPVPPGPPMA 328
S ++P P ++P P P +P+ P P + P P P PP
Sbjct: 482 ALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE 541
Query: 329 RVPPGPPMARVPPGPPMAPLPPGPP-----MAPLPPGPPMAPLPPGPPMAPLPPRSHV 381
P PP P PP LP PP ++P P PM+P P PM+P P S +
Sbjct: 542 ASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRL 599
Score = 69.7 bits (169), Expect = 4e-12
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 230 DPALCV-----HLVPQLPRPPVLPVP------PMPPRPPMVPMPPRP------------P 266
+P LC HL P+ P + P P P P + P P P P
Sbjct: 731 EPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSP 790
Query: 267 IAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPP--- 323
A P ++P P ++P P ++PVP P ++P P ++P P ++P P
Sbjct: 791 QAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESH 850
Query: 324 -GPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPL--------PPGPPMAP 374
P + + P P + P P P P P+ P P P ++PL P PP++P
Sbjct: 851 LSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSP 910
Query: 375 LP 376
LP
Sbjct: 911 LP 912
Score = 68.2 bits (165), Expect = 1e-11
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 231 PALCVHLVPQL-PRPPVLPVPPMPPRPPMVPMPPRPPIAPM---PPMAPVPPGSRMAPVP 286
P L + PQL PR + P P P + P P P ++P P ++P P + VP
Sbjct: 724 PLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVP 783
Query: 287 PGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMA 346
P ++P P ++P P ++P P ++PVP P ++ P ++ P ++
Sbjct: 784 EEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLS 843
Query: 347 PLPPGPPMAPLPPGPPMAPLPPGPPMAP 374
P P ++P PP++P P PP P
Sbjct: 844 PRPEESHLSPELEKPPLSPRPEKPPEEP 871
Score = 64.3 bits (155), Expect = 2e-10
Identities = 55/187 (29%), Positives = 73/187 (39%), Gaps = 42/187 (22%)
Query: 236 HLVPQLPRPPVLPVPPMPPRPP-MVPMPPRPPIAPMPPMAPVPP--GSRMAPVPPGPRMA 292
HL P+L +PP+ P P PP P P P P+ P P + P G P P ++
Sbjct: 850 HLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLS 909
Query: 293 PVPPWPPMAPV--PPWPP--MAPVPTGPPMAPV--------------------------- 321
P+P P++P P P M P P PP++P+
Sbjct: 910 PLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDP 969
Query: 322 --PPGPPMARVPPGPP----MARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPL 375
P P+ P PP P PPM LPP P +P+ P P+ P P +PL
Sbjct: 970 ESPLAAPILETPISPPPEANCTDPEPVPPMI-LPPSPG-SPVGPASPILMEPLPPQCSPL 1027
Query: 376 PPRSHVP 382
S VP
Sbjct: 1028 LQHSLVP 1034
Score = 58.2 bits (139), Expect = 1e-08
Identities = 57/194 (29%), Positives = 74/194 (38%), Gaps = 53/194 (27%)
Query: 236 HLVPQL------PRP------PVLPVPPMPPRPPMVPMPPRPPIAPMP-PMAPVPPGSRM 282
HL PQ PRP P L PP+ PRP P P AP P+ P P +
Sbjct: 832 HLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSL 891
Query: 283 APVPPGPRMAPVPPWPPMAPVPPWPP-------------MAPVPTGPPMAPV-----PP- 323
+P+ P ++ P PP++P+P P M P P PP++P+ PP
Sbjct: 892 SPLLGEPALSE-PGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPA 950
Query: 324 --------------GPPMARVPPGPPMARVPPGPP-----MAPLPPGPPMAPLPPGPPMA 364
G P P+ P PP P P P + P PG P+
Sbjct: 951 LSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVG 1010
Query: 365 PLPPGPPMAPLPPR 378
P P M PLPP+
Sbjct: 1011 PASP-ILMEPLPPQ 1023
Score = 56.2 bits (134), Expect = 5e-08
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 227 PALDPALCVHLVPQLPRPPVLPVPPMPPRPP----------MVPMPPRPPIAPM------ 270
P+L P L + + PP+ P+P P P M P P PP++P+
Sbjct: 889 PSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAP 948
Query: 271 PPMAPV-----PPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGP 325
P ++P+ P G++ P P AP+ P++P P P P P + P PG
Sbjct: 949 PALSPLGELEYPFGAKGDSDPESPLAAPILE-TPISPPPEANCTDPEPVPPMILPPSPGS 1007
Query: 326 PMARVPPGPPMARVPPGPPMAPL------PPGPPMAPLPPGPPMAPLPPGPPMAPL 375
P V P P+ P P +PL P P P PP PL P++P+
Sbjct: 1008 P---VGPASPILMEPLPPQCSPLLQHSLVPQNSP--PSQCSPPALPLSVPSPLSPI 1058
Score = 55.1 bits (131), Expect = 1e-07
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 21/102 (20%)
Query: 287 PGPRMAPV--------PPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMAR 338
PGP+ P+ P PP P PP + TGP + PV P PP P +
Sbjct: 4267 PGPQTGPLQELGAGPRPQGPPRLPAPP----GALSTGPVLGPVHPTPP-------PSSPQ 4315
Query: 339 VPPGPPMAPLPPG--PPMAPLPPGPPMAPLPPGPPMAPLPPR 378
P P P P P A LPP P P P GP + P P R
Sbjct: 4316 EPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGR 4357
Score = 52.0 bits (123), Expect = 1e-06
Identities = 83/338 (24%), Positives = 114/338 (33%), Gaps = 50/338 (14%)
Query: 81 EPEQQQEEPPLTKPEQQQEEPPLLEL-------------KQEQEEPPQTTVE-----GPQ 122
+P Q +PPL P QQQ++ LL E P + G Q
Sbjct: 4085 QPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQ 4144
Query: 123 PAEGPQTAEGPQPP--ERKRRRRTAFTQFQ----LQELENFFDESQYPDVVARERLAARL 176
P Q GPQ P ER + T + LQ + P V +L A+L
Sbjct: 4145 PGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQGLPGVGIMPTV---GQLRAQL 4201
Query: 177 NLTEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVH 236
+ + ++ Q +LM R + + +P C
Sbjct: 4202 QGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGCQP 4261
Query: 237 LVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
+ P P P+ + P RP PP P PPG+ + GP + PV P
Sbjct: 4262 QLGGFPGPQTGPLQELGAGP-------RPQ---GPPRLPAPPGA----LSTGPVLGPVHP 4307
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPG---PP 353
PP P P P P P + + P A++PP P P GP + P PPG P
Sbjct: 4308 TPP--PSSPQEPKRPSQLPSPSSQL---PTEAQLPPTHPGTPKPQGPTLEP-PPGRVSPA 4361
Query: 354 MAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAPVHI 391
A L L P P L + L P H+
Sbjct: 4362 AAQLADTLFSKGLGPWDPPDNLAETQKPEQSSLVPGHL 4399
Score = 51.2 bits (121), Expect = 2e-06
Identities = 46/159 (28%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 240 QLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPG-PRMAPVPPWP 298
+L P V P P + P P + P P PP +AP PP P + +
Sbjct: 2320 ELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEP----PPAQALAPSPPSHPDI-----FR 2370
Query: 299 PMAPVPPW--PPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPP-----MAPLPPG 351
P + P+ PP+ P P PP PP R P P +RVP P +PL P
Sbjct: 2371 PGSYTDPYAQPPLTPRPQPPPPESCCALPP--RSLPSDPFSRVPASPQSQSSSQSPLTPR 2428
Query: 352 PPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAPVH 390
P A P+ P P PP AP+H
Sbjct: 2429 PLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLH 2467
Score = 50.4 bits (119), Expect = 3e-06
Identities = 37/131 (28%), Positives = 47/131 (35%), Gaps = 4/131 (3%)
Query: 258 MVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPP 317
M P P P P+ G ++ P P +P PP P PP PT PP
Sbjct: 404 MQPKEPGPLQCEAKPLGKA--GVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPP 461
Query: 318 MAPVPPGPPMARVPPGPPMARVPPGPPM--APLPPGPPMAPLPPGPPMAPLPPGPPMAPL 375
PP +P P + P+ +PL P P +PL P P +P P
Sbjct: 462 PEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLS 521
Query: 376 PPRSHVPHTGL 386
PP P L
Sbjct: 522 PPEESPPSPAL 532
Score = 49.3 bits (116), Expect = 6e-06
Identities = 38/139 (27%), Positives = 48/139 (34%), Gaps = 6/139 (4%)
Query: 250 PPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPP----GPRMAPVPPWPPMAPVPP 305
P P V +P + M P PG P G ++ P P +P
Sbjct: 381 PTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEMPL 440
Query: 306 WPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPM--APLPPGPPM 363
PP P PP P PP PP +P P L P+ +PL P P
Sbjct: 441 LPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEE 500
Query: 364 APLPPGPPMAPLPPRSHVP 382
+PL P P +P P P
Sbjct: 501 SPLSPPPESSPFSPLEESP 519
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/139 (30%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 237 LVPQLPRPPVLPVPPMPPRPPMVPMP-------PRPPIAPMPPMAPVPPGSRMAPVP--- 286
L PQ P PP + P PP P + P +PP+ P P P PP S A P
Sbjct: 2347 LRPQEP-PPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQ--PPPPESCCALPPRSL 2403
Query: 287 PGPRMAPVPPWPP-----MAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPP 341
P + VP P +P+ P P A P+ P P PP P +R P
Sbjct: 2404 PSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPF 2463
Query: 342 GPPMAPLPPGPPMAPLPPG 360
P P P PP G
Sbjct: 2464 APLHKPPRPQPPEVAFKAG 2482
Score = 47.0 bits (110), Expect = 3e-05
Identities = 54/182 (29%), Positives = 65/182 (35%), Gaps = 22/182 (12%)
Query: 219 LGGAYYAAPALDPALCVHLVPQL-PRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAP-- 275
LGG P + A Q+ P+ P L + P P PP +AP PP P
Sbjct: 2316 LGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEP-------PPAQALAPSPPSHPDI 2368
Query: 276 VPPGSRMAPV---PPGPRMAPVPPWPPMAPVP---PWPPMAPVPTGPP-----MAPVPPG 324
PGS P P PR P PP A P P P + VP P +P+ P
Sbjct: 2369 FRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPR 2428
Query: 325 PPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHT 384
P A P+ P PP P + P P P P PP S + HT
Sbjct: 2429 PLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGS-LAHT 2487
Query: 385 GL 386
L
Sbjct: 2488 SL 2489
Score = 42.0 bits (97), Expect = 0.001
Identities = 69/273 (25%), Positives = 83/273 (30%), Gaps = 99/273 (36%)
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPA--LCVHLVPQLP-----RPPVLPVPPMPPRPPM 258
T A L+ D FL + P D L + L PQ+P + P P P P
Sbjct: 2130 TTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRF 2189
Query: 259 VPMPPRPPIAPMPPMAPVPP---GSRMAP----------VPPG-PRMAPVPPWPPMAPVP 304
PP P P P AP P G+ P PPG PR P P P + P
Sbjct: 2190 PTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRC 2249
Query: 305 PWPPMAPVPTGP---------PMAPVPP----------------------GPP------- 326
P VP P P+ PP GPP
Sbjct: 2250 PSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDS 2309
Query: 327 ----------------MARVPPGPPMARVPPGPPMAPL-----PPGPPMAPLPPG----- 360
+ + P P ++V P P L PP +AP PP
Sbjct: 2310 PSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIF 2369
Query: 361 -----------PPMAPLPPGPP---MAPLPPRS 379
PP+ P P PP LPPRS
Sbjct: 2370 RPGSYTDPYAQPPLTPRPQPPPPESCCALPPRS 2402
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/114 (31%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Query: 261 MPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPW--PPMAPVP-PWPPMAPVPTGPP 317
+PP+P PP A P +P P + PP VP P P PP
Sbjct: 2106 IPPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPP 2165
Query: 318 MAP--VPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPG 369
P VP P P P R P PP P P P AP P A PG
Sbjct: 2166 QVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPG 2219
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 239 PQLPRPPVLPVPPMPPRPPMVPMP--PRPPIAPMPPMAPVPPGSRMAPVPPGPRMAP 293
P+ P PP P+ P P PP P+ P P+A P +P+P S P PR P
Sbjct: 4911 PEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARP 4967
Score = 40.4 bits (93), Expect = 0.003
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 334 PPMARVPPGPPMAPLPPGPPMAPL----------PPGPPMAPLPPGPPMAPLPPRSHVPH 383
PP PP P+AP P PP PL PP P PL P A PR+ P
Sbjct: 4910 PPEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPE 4969
Query: 384 TG 385
G
Sbjct: 4970 EG 4971
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 245 PVL--PVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAP------VPP 296
P+L P+ P P P P P I P P +PV P S + P P+ +P VP
Sbjct: 976 PILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQ 1035
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAP 356
P P PP P+ P++P+ ++ M P P +P
Sbjct: 1036 NSP--PSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSP 1093
Query: 357 LPPGPPMAPLP-PGPPMAP 374
LP PM L P P AP
Sbjct: 1094 LP--SPMGDLSCPAPSPAP 1110
Score = 38.5 bits (88), Expect = 0.011
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 298 PPMAPVPPWPPMAPVPTGPPMAPVP--PGPPMARVP-PGP-PMARVP----PGPPMAPLP 349
PP P PP P+AP P PP P+ P P+A P P P P+A P P P P
Sbjct: 4910 PPEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPE 4969
Query: 350 PGPPMAP 356
G P
Sbjct: 4970 EGEDSRP 4976
Score = 36.6 bits (83), Expect = 0.042
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 247 LPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWP-PMAPVP- 304
L V + PP P PP P+AP P P P + +P P P P P P+A P
Sbjct: 4901 LDVRQLSAPPPEEPSPPPSPLAPSPASPPTEP---LVELPTEPLAEPPVPSPLPLASSPE 4957
Query: 305 ---PWPPMAPVPTGPPMAP 320
P P P G P
Sbjct: 4958 SARPKPRARPPEEGEDSRP 4976
Score = 35.8 bits (81), Expect = 0.071
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 271 PPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWP-PMAPVPTGPPMAPVPPG---PP 326
PP P PP S +AP P P P P+ +P P PVP+ P+A P P
Sbjct: 4910 PPEEPSPPPSPLAPSPASP------PTEPLVELPTEPLAEPPVPSPLPLASSPESARPKP 4963
Query: 327 MARVPPGPPMARVP 340
AR P +R P
Sbjct: 4964 RARPPEEGEDSRPP 4977
Score = 34.7 bits (78), Expect = 0.16
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 250 PPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPP--WP 307
PP P PP P+ P P P P+ +P + PP P P+ P A P P
Sbjct: 4910 PPEEPSPPPSPLAPSPASPPTEPLVELP--TEPLAEPPVPSPLPLASSPESARPKPRARP 4967
Query: 308 PMAPVPTGPP 317
P + PP
Sbjct: 4968 PEEGEDSRPP 4977
Score = 32.7 bits (73), Expect = 0.60
Identities = 32/83 (38%), Positives = 36/83 (43%), Gaps = 16/83 (19%)
Query: 320 PVPPGPPMARVPPGPPMA----RVP-PGPPMAPLPPGPPM-------APLPPGPPMAPLP 367
P PGP + R G P+A R+P PG P+ P P GP GP P P
Sbjct: 2838 PSTPGPELGRQALGSPLAGISTRLPGPGEPV-PGPAGPAQFIELRHNVQKGLGPGGTPFP 2896
Query: 368 -PGPPMAP-LPPRSHVPHTGLAP 388
GPP P P S PH LAP
Sbjct: 2897 GQGPPQRPRFYPVSEDPHR-LAP 2918
Score = 32.3 bits (72), Expect = 0.79
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 350 PGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAP 395
PGP PL P P GPP P PP + L PVH T P
Sbjct: 4267 PGPQTGPLQE-LGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPP 4311
Score = 32.3 bits (72), Expect = 0.79
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPP- 323
PP P PP +P+ P P P + P P+A PP P P+ + P A P
Sbjct: 4910 PPEEPSPPPSPLAPSPASPPTEPLVEL----PTEPLAE-PPVPSPLPLASSPESARPKPR 4964
Query: 324 -GPPMARVPPGPP 335
PP PP
Sbjct: 4965 ARPPEEGEDSRPP 4977
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 298 PPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPL 357
PP P P PP +P+ P PP P+ +P P PP P PL P A
Sbjct: 4909 PP--PEEPSPPPSPLAPSPAS---PPTEPLVELPTEP--LAEPPVPSPLPLASSPESA-- 4959
Query: 358 PPGPPMAPLPPGPPMAP 374
P P P G P
Sbjct: 4960 RPKPRARPPEEGEDSRP 4976
Score = 29.3 bits (64), Expect = 6.7
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 243 RPPVLPVPPMPPRPPMVPMPPR--PPIAPMPPMAPVPPGSR--MAPVPPGPRMAPVPPWP 298
R P LP P MP +PP + R P +A + + G A + P PV
Sbjct: 3321 RQPGLPQPLMPTQPPAHALQQRLAPSMAMVSNQGHMLSGQHGGQAGLVPQQSSQPVLSQK 3380
Query: 299 PMAPVPPWPPMAP 311
PM +PP M P
Sbjct: 3381 PMGTMPPSMCMKP 3393
Score = 29.3 bits (64), Expect = 6.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 17/73 (23%)
Query: 83 EQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQ-----------------TTVEGPQPAE 125
+QQQ++ L + +QQQ + +L+Q+Q++ Q T+ PQ +
Sbjct: 3932 QQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQ 3991
Query: 126 GPQTAEGPQPPER 138
Q A GP P +
Sbjct: 3992 QQQVALGPGMPAK 4004
Score = 29.3 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 352 PPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLA 387
PP P P PP +PL P P P P +P LA
Sbjct: 4909 PP--PEEPSPPPSPLAPSPASPPTEPLVELPTEPLA 4942
>gi|188219638 paired box 3 isoform PAX3i [Homo sapiens]
Length = 483
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 165 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 224
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 225 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 275
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 276 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 333
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 334 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 381
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 166 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 225
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 226 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 276
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 277 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 334
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 335 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 166 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 225
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 226 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 276
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 277 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 334
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 335 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 166 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 225
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 226 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 276
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 277 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 334
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 335 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 166 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 225
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 226 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 276
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 277 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 334
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 335 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 90.5 bits (223), Expect = 2e-18
Identities = 75/228 (32%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 98 QEEPPLLELKQ--EQEEPPQTTVEG--PQPAEGPQTAEGPQ-------PPERKRRR-RTA 145
+EE LE K+ E E+ + +++G + A PQ+ EG P +RK+RR RT
Sbjct: 166 EEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTT 225
Query: 146 FTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRN 205
FT QL+ELE F+ + YPD+ RE LA R LTE RVQVWF NRRA+W R
Sbjct: 226 FTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARW---------RK 276
Query: 206 TATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLP-RPPVLPVPPMPPRPPMVPMPPR 264
A A+ + + G + P P L + + + +P +P P + P
Sbjct: 277 QAGANQLMAFNHLIPGGF--PPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPL 334
Query: 265 PPIAPMPPMAPVPPGSRMAPVPPGPRM-------APVPPWPPMAPVPP 305
PP P P S A P R + VPP P P+ P
Sbjct: 335 PPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP 382
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 89.7 bits (221), Expect = 4e-18
Identities = 63/163 (38%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 242 PRPPVLPVPPM------PPR--PPMVPMPPRPPIAPMP---PMAPVPPGSRMAPV----- 285
P+PP+ P PP PP+ PP P P +PP P P P PP PV
Sbjct: 56 PKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGP 115
Query: 286 ---------PPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPP-MAPVPPGPPMARVPPGPP 335
PP AP P PP + PP P PT PP + PPG P PP PP
Sbjct: 116 GPAPGVGSAPPASSSAP-PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP----PPTPP 170
Query: 336 MARVPPGPPMAPLPPGPPMA-PLP-PGPPMAPLPPGPPMAPLP 376
+ VP PP A PP PP A P P PGP P P GP +P
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMP 213
Score = 84.3 bits (207), Expect = 2e-16
Identities = 61/155 (39%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 236 HLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAP--------VPP 287
H P P+P PP PP+ P+ + P P P + PP S AP PP
Sbjct: 85 HQPPPHPQPHQQQQPPPPPQDSSKPVVAQGP-GPAPGVGSAPPASSSAPPATPPTSGAPP 143
Query: 288 GPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVP---PGPP 344
G P P PP V PP AP PT PP + VP PP A PP PP A VP PGP
Sbjct: 144 GSGPGPTPTPPPA--VTSAPPGAPPPT-PPSSGVPTTPPQAGGPP-PPPAAVPGPGPGPK 199
Query: 345 MAPLPPGP-----PMAPLPPGPPMAPLPPGPPMAP 374
P P GP P P P G P P G P P
Sbjct: 200 QGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
Score = 79.0 bits (193), Expect = 7e-15
Identities = 62/156 (39%), Positives = 69/156 (44%), Gaps = 23/156 (14%)
Query: 255 RPPMVPMP----PRPPIAPMPP--MAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPP 308
R PM P P P+PPI P PP PP + P P P P P P PP PP
Sbjct: 44 RGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
Query: 309 M----APVPTGPPMAP-VPPGPP-MARVPPG-PPMARVPP--GPPMAPLPP-----GPPM 354
V GP AP V PP + PP PP + PP GP P PP PP
Sbjct: 104 QDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPG 163
Query: 355 APLPPGPPMAPLPPGPPMA--PLPPRSHVPHTGLAP 388
AP PP PP + +P PP A P PP + VP G P
Sbjct: 164 AP-PPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
Score = 61.2 bits (147), Expect = 2e-09
Identities = 47/144 (32%), Positives = 55/144 (38%), Gaps = 37/144 (25%)
Query: 277 PPGSRM----APVPPGPRMA----PVPPWPPMAPVPPWPPMAPVPTGPP--MAPVPPGPP 326
PPG + P+ PGP + P+PP PP PP P P PP P P P
Sbjct: 35 PPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPH 94
Query: 327 MARVPPGPP-----------------MARVPPG--------PPMAPLPPGPPMAPLP-PG 360
+ PP PP + PP PP + PPG P P P
Sbjct: 95 QQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPP 154
Query: 361 PPMAPLPPGPPMAPLPPRSHVPHT 384
P + PPG P P PP S VP T
Sbjct: 155 PAVTSAPPGAP-PPTPPSSGVPTT 177
Score = 47.0 bits (110), Expect = 3e-05
Identities = 43/126 (34%), Positives = 46/126 (36%), Gaps = 29/126 (23%)
Query: 242 PRPPVLPVPP--MPPRPPMVPMPPRPPIA---PMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
P P V PP PP PP +P PP A P PP A PG PGP+ P P
Sbjct: 153 PPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG-------PGPKQGPGPG 205
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPP----GPPMARVPPGPP------MA 346
P +P P P G P P G P PP G P PP
Sbjct: 206 GPKGGKMPG----GPKPGGGPGLSTPGGHPK---PPHRGGGEPRGGRQHHPPYHQQHHQG 258
Query: 347 PLPPGP 352
P P GP
Sbjct: 259 PPPGGP 264
Score = 43.1 bits (100), Expect = 4e-04
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 40 GGEDEENTRSKPEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQ- 98
GG + P G N G G P + P QQQ++PP +P QQ
Sbjct: 23 GGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQP 82
Query: 99 ---EEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQP 135
+ PP + Q+Q+ PP PQ + P A+GP P
Sbjct: 83 PPHQPPPHPQPHQQQQPPPP-----PQDSSKPVVAQGPGP 117
Score = 36.2 bits (82), Expect = 0.055
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 322 PPGPPMA--RVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRS 379
PPG + R P GP + P PP+ P PP PP P PP P P P+
Sbjct: 35 PPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPP-PHQPPPHPQP 93
Query: 380 HVPHTGLAPVHITWAPVI 397
H P + PV+
Sbjct: 94 HQQQQPPPPPQDSSKPVV 111
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 89.7 bits (221), Expect = 4e-18
Identities = 94/323 (29%), Positives = 117/323 (36%), Gaps = 83/323 (25%)
Query: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKW 194
P ++RR RT FT +QL+ELE F+ES YPDV RE LA RL+L E RVQVWFQNRRAKW
Sbjct: 101 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKW 160
Query: 195 KRNQRVL------MLRNTATADLAHPLD-----------------------MFLGGAYYA 225
++ + + T P+D + G +
Sbjct: 161 RKKENTKKGPGRPAHNSHPTTCSGEPMDPEEIARKELEKMEKKKRKHEKKLLKSQGRHLH 220
Query: 226 APALDPALCVHLVPQLPRPP----VLPVPPMPPRP----PMVPMPPRPPIAPMPPMAPVP 277
+P L +H P + P PP PP P P AP PP P
Sbjct: 221 SPG---GLSLHSAPSSDSDSGGGGLSPEPPEPPPPAAKGPGAHASGAAGTAPAPPGEPPA 277
Query: 278 PGSRMAPVPPGPRMAPVPPWPPMAPVP-------PWPPMAPVPTG----PPMAP------ 320
PG+ P R P P P P +A V G P +P
Sbjct: 278 PGTCDPAFYPSQRSGAGPQPRPGRPADKDAASCGPGAAVAAVERGAAGLPKASPFSVESL 337
Query: 321 VPPGPPMARVPPGPPMARV-----PPGPPMAP---------------LPPG--PPMAPLP 358
+ PP + A PG P AP P G P A L
Sbjct: 338 LSDSPPRRKAASNAAAAAAAGLDFAPGLPCAPRTLIGKGHFLLYPITQPLGFLVPQAALK 397
Query: 359 PGPPMAP----LPPGPPMAPLPP 377
G + P PP P + P PP
Sbjct: 398 GGAGLEPAPKDAPPAPAVPPAPP 420
Score = 46.6 bits (109), Expect = 4e-05
Identities = 83/331 (25%), Positives = 98/331 (29%), Gaps = 55/331 (16%)
Query: 66 SVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAE 125
S PS D D GGGG PE + PP K EPP P
Sbjct: 229 SAPSSDSD-SGGGGLSPEPPEPPPPAAKGPGAHASGAAGTAPAPPGEPPAPGTCDPAFYP 287
Query: 126 GPQTAEGPQP-PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARL-NLTEDRV 183
++ GPQP P R + A V A ER AA L + V
Sbjct: 288 SQRSGAGPQPRPGRPADKDAASC-------------GPGAAVAAVERGAAGLPKASPFSV 334
Query: 184 QVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMFLG-----------GAYYAAPALDPA 232
+ + + K + A A A LD G G + P P
Sbjct: 335 ESLLSDSPPRRKA-------ASNAAAAAAAGLDFAPGLPCAPRTLIGKGHFLLYPITQPL 387
Query: 233 LCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMA 292
LVPQ + P P P P P + P PP GP A
Sbjct: 388 --GFLVPQAALKGGAGLEPAPKDAP-----------PAPAVPPAPPAQASFGAFSGPGGA 434
Query: 293 PVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLP-PG 351
P + +P P AP P P + A G A P P P P
Sbjct: 435 PDSAFARRSPDAVASPGAPAPAPAPFRDLASAA--ATEGGGGDCADAGTAGPAPPPPAPS 492
Query: 352 PPMAPLPPGPPMAPL-----PPGPPMAPLPP 377
P P PP P P PG P PP
Sbjct: 493 PRPGPRPPSPAEEPATCGVPEPGAAAGPSPP 523
Score = 33.5 bits (75), Expect = 0.35
Identities = 38/137 (27%), Positives = 44/137 (32%), Gaps = 46/137 (33%)
Query: 297 WPPMAPVPPWPPMAPVPTGPPMAPVPP-GPPMARVPPGPP------------------MA 337
+P P+ P A + G + P P PP VPP PP A
Sbjct: 381 YPITQPLGFLVPQAALKGGAGLEPAPKDAPPAPAVPPAPPAQASFGAFSGPGGAPDSAFA 440
Query: 338 RVPPGPPMAPLPPGPPMAPL-----------------------PPGPPMAPLP-PGP-PM 372
R P +P P P AP P PP AP P PGP P
Sbjct: 441 RRSPDAVASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRPGPRPP 500
Query: 373 APL--PPRSHVPHTGLA 387
+P P VP G A
Sbjct: 501 SPAEEPATCGVPEPGAA 517
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.137 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,441,015
Number of Sequences: 37866
Number of extensions: 2706449
Number of successful extensions: 124177
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 1632
Number of HSP's that attempted gapping in prelim test: 19579
Number of HSP's gapped (non-prelim): 35689
length of query: 406
length of database: 18,247,518
effective HSP length: 105
effective length of query: 301
effective length of database: 14,271,588
effective search space: 4295747988
effective search space used: 4295747988
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.