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Search of human proteins with 11612674
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11612674 FXYD domain containing ion transport regulator 3
isoform 2 precursor [Homo sapiens]
(113 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209862819 FXYD domain containing ion transport regulator 3 is... 241 9e-65
gi|11612674 FXYD domain containing ion transport regulator 3 iso... 241 9e-65
gi|209862811 FXYD domain containing ion transport regulator 3 is... 204 1e-53
gi|209862817 FXYD domain containing ion transport regulator 3 is... 171 1e-43
gi|209862809 FXYD domain containing ion transport regulator 3 is... 171 1e-43
gi|5174635 FXYD domain containing ion transport regulator 3 isof... 171 1e-43
gi|27764904 FXYD domain containing ion transport regulator 4 [Ho... 75 1e-14
gi|209862815 FXYD domain containing ion transport regulator 3 is... 69 1e-12
gi|209862813 FXYD domain containing ion transport regulator 3 is... 69 1e-12
gi|169194724 PREDICTED: similar to FXYD domain-containing ion tr... 51 2e-07
gi|169194767 PREDICTED: similar to FXYD domain-containing ion tr... 51 2e-07
gi|169190389 PREDICTED: similar to FXYD domain-containing ion tr... 51 2e-07
gi|11612672 phospholemman precursor [Homo sapiens] 50 3e-07
gi|11612670 phospholemman precursor [Homo sapiens] 50 3e-07
gi|11612655 FXYD domain-containing ion transport regulator 6 [Ho... 47 2e-06
gi|11125764 FXYD domain-containing ion transport regulator 2 iso... 37 0.003
gi|11125766 FXYD domain-containing ion transport regulator 2 iso... 37 0.003
gi|11612659 FXYD domain-containing ion transport regulator 7 [Ho... 36 0.008
gi|47778938 FXYD domain-containing ion transport regulator 5 [Ho... 35 0.013
gi|21618361 FXYD domain-containing ion transport regulator 5 [Ho... 35 0.013
gi|188595665 FXYD domain-containing ion transport regulator 2 is... 32 0.11
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 31 0.19
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 31 0.19
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 31 0.19
gi|222831614 hypothetical protein LOC388963 [Homo sapiens] 29 0.70
gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens] 28 1.2
gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens] 28 1.2
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 28 1.6
gi|156104878 glutaminase [Homo sapiens] 27 2.7
gi|206725447 leucine rich repeat containing 23 isoform a [Homo s... 27 2.7
>gi|209862819 FXYD domain containing ion transport regulator 3
isoform 2 precursor [Homo sapiens]
Length = 113
Score = 241 bits (615), Expect = 9e-65
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
>gi|11612674 FXYD domain containing ion transport regulator 3
isoform 2 precursor [Homo sapiens]
Length = 113
Score = 241 bits (615), Expect = 9e-65
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
>gi|209862811 FXYD domain containing ion transport regulator 3
isoform4 precursor [Homo sapiens]
Length = 96
Score = 204 bits (519), Expect = 1e-53
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSG 96
RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSG
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSG 96
>gi|209862817 FXYD domain containing ion transport regulator 3
isoform 1 precursor [Homo sapiens]
Length = 87
Score = 171 bits (432), Expect = 1e-43
Identities = 87/113 (76%), Positives = 87/113 (76%), Gaps = 26/113 (23%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS-- 58
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
AKCKCKFGQKSGHHPGETPPLITPGSAQS
Sbjct: 59 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS 87
>gi|209862809 FXYD domain containing ion transport regulator 3
isoform 3 [Homo sapiens]
Length = 144
Score = 171 bits (432), Expect = 1e-43
Identities = 87/113 (76%), Positives = 87/113 (76%), Gaps = 26/113 (23%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS
Sbjct: 58 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS-- 115
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
AKCKCKFGQKSGHHPGETPPLITPGSAQS
Sbjct: 116 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS 144
>gi|5174635 FXYD domain containing ion transport regulator 3 isoform
1 precursor [Homo sapiens]
Length = 87
Score = 171 bits (432), Expect = 1e-43
Identities = 87/113 (76%), Positives = 87/113 (76%), Gaps = 26/113 (23%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS-- 58
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
AKCKCKFGQKSGHHPGETPPLITPGSAQS
Sbjct: 59 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS 87
>gi|27764904 FXYD domain containing ion transport regulator 4 [Homo
sapiens]
Length = 89
Score = 75.1 bits (183), Expect = 1e-14
Identities = 48/113 (42%), Positives = 59/113 (52%), Gaps = 29/113 (25%)
Query: 1 MQKVTLGLLVFLAGFPVLDAND-LEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSE 59
M++VTL LL+ LAG L+AND +K+ PFYYDW +LQ+ GLIC G+L GI V+S
Sbjct: 1 MERVTLALLL-LAGLTALEANDPFANKDDPFYYDWKNLQLSGLICGGLLAIAGIAAVLS- 58
Query: 60 WRSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKS-GHHPGETPPLITPGSA 111
KCKCK QK P + PLITPGSA
Sbjct: 59 -------------------------GKCKCKSSQKQHSPVPEKAIPLITPGSA 86
>gi|209862815 FXYD domain containing ion transport regulator 3
isoform 5 precursor [Homo sapiens]
Length = 61
Score = 68.6 bits (166), Expect = 1e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY 32
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY 32
>gi|209862813 FXYD domain containing ion transport regulator 3
isoform 5 precursor [Homo sapiens]
Length = 61
Score = 68.6 bits (166), Expect = 1e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY 32
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYY 32
>gi|169194724 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGE 101
G +CKC F QK PGE
Sbjct: 58 -----------------------GCRCKCSFNQKP-RTPGE 74
>gi|169194767 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGE 101
G +CKC F QK PGE
Sbjct: 58 -----------------------GCRCKCSFNQKP-RTPGE 74
>gi|169190389 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGE 101
G +CKC F QK PGE
Sbjct: 58 -----------------------GCRCKCSFNQKP-RTPGE 74
>gi|11612672 phospholemman precursor [Homo sapiens]
Length = 92
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 26/87 (29%)
Query: 8 LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQA 67
+LVF G + + ++ PF YD+ SLQ+GGL+ AG+L +GI+IV+S
Sbjct: 7 ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSR-------- 58
Query: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQK 94
+C+CKF Q+
Sbjct: 59 ------------------RCRCKFNQQ 67
>gi|11612670 phospholemman precursor [Homo sapiens]
Length = 92
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 26/87 (29%)
Query: 8 LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQA 67
+LVF G + + ++ PF YD+ SLQ+GGL+ AG+L +GI+IV+S
Sbjct: 7 ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSR-------- 58
Query: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQK 94
+C+CKF Q+
Sbjct: 59 ------------------RCRCKFNQQ 67
>gi|11612655 FXYD domain-containing ion transport regulator 6 [Homo
sapiens]
Length = 95
Score = 47.4 bits (111), Expect = 2e-06
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
M+ V + L LA + A + E + PF+YD+ +L++GGL+ A VL ++GI++++S
Sbjct: 1 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSR- 59
Query: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQK---SGHHPGETPPLITPGSAQ 112
+CKC F QK G + LIT + +
Sbjct: 60 -------------------------RCKCSFNQKPRAPGDEEAQVENLITANATE 89
>gi|11125764 FXYD domain-containing ion transport regulator 2
isoform 2 [Homo sapiens]
Length = 64
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 11 FLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS-EWRSSGEQAGR 69
+L G P D + PFYYD+ +++ GGLI AG+ +G++I++S +R G + R
Sbjct: 5 YLGGSPKGDVD-------PFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRR 57
>gi|11125766 FXYD domain-containing ion transport regulator 2
isoform 1 [Homo sapiens]
Length = 66
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 29 PFYYDWHSLQVGGLICAGVLCAMGIIIVMS-EWRSSGEQAGR 69
PFYYD+ +++ GGLI AG+ +G++I++S +R G + R
Sbjct: 18 PFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRR 59
>gi|11612659 FXYD domain-containing ion transport regulator 7
[Homo sapiens]
Length = 80
Score = 35.8 bits (81), Expect = 0.008
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 25 DKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSE 59
++ PFYYD++++Q G+ A +L +GI+IV+S+
Sbjct: 13 EEPDPFYYDYNTVQTVGMTLATILFLLGILIVISK 47
>gi|47778938 FXYD domain-containing ion transport regulator 5 [Homo
sapiens]
Length = 178
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 KNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS 58
++ PF+YD H+L+ GL+ A VL GIII+ S
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTS 163
>gi|21618361 FXYD domain-containing ion transport regulator 5 [Homo
sapiens]
Length = 178
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 KNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS 58
++ PF+YD H+L+ GL+ A VL GIII+ S
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTS 163
>gi|188595665 FXYD domain-containing ion transport regulator 2
isoform 3 [Homo sapiens]
Length = 145
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 33 DWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQAGRG 70
D+ +++ GGLI AG+ +G++I++S+W G GRG
Sbjct: 88 DYETVRNGGLIFAGLAFIVGLLILLSKW---GGLQGRG 122
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 69 RGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
RG GSP T+L GA+ F K+ GE P L P QS
Sbjct: 732 RGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKPHCHQS 776
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 69 RGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
RG GSP T+L GA+ F K+ GE P L P QS
Sbjct: 732 RGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKPHCHQS 776
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 69 RGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS 113
RG GSP T+L GA+ F K+ GE P L P QS
Sbjct: 732 RGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKPHCHQS 776
>gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
Length = 588
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 58 SEWRSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLI 106
S W E G W T++ P G + + GQ G P TPP++
Sbjct: 478 SGWEGKAELLGELWAG---RTRVPPQGLELADREGQDPGRWPRTTPPVL 523
>gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 10 VFLAGFP--VLDANDLEDKNSPFYYDWHS----LQVGGLICAGVLCAMGIIIVM 57
+F+AG P +++ + ++ + FY + S L+ G I VLCA+GI+I +
Sbjct: 44 LFMAGLPFLIIETSTIKPYHRGFYCNDESIKYPLKTGETINDAVLCAVGIVIAI 97
>gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 10 VFLAGFP--VLDANDLEDKNSPFYYDWHS----LQVGGLICAGVLCAMGIIIVM 57
+F+AG P +++ + ++ + FY + S L+ G I VLCA+GI+I +
Sbjct: 44 LFMAGLPFLIIETSTIKPYHRGFYCNDESIKYPLKTGETINDAVLCAVGIVIAI 97
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo
sapiens]
Length = 663
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 59 EWRSSGEQAGR-----GWGSPPLTTQLSPTGAKC 87
EWR+ G+ G WGS L TQ P ++C
Sbjct: 38 EWRAQGQAGGARAPWDSWGSSRLPTQPGPGWSRC 71
>gi|156104878 glutaminase [Homo sapiens]
Length = 669
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQKSGH-HPGETPP 104
G GW + PL LS + ++ + G+ S H PG +PP
Sbjct: 60 GGGWPAEPLARGLSSSPSEILQELGKGSTHPQPGVSPP 97
>gi|206725447 leucine rich repeat containing 23 isoform a [Homo
sapiens]
Length = 343
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 59 EWRSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGH 97
++R GE+ W PLT + G CK G H
Sbjct: 31 DYRKEGEEFPEEWLPTPLTEDMMKEGLSLLCKTGNGLAH 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,436,652
Number of Sequences: 37866
Number of extensions: 259451
Number of successful extensions: 692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 50
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.