Search of human proteins with 11612672

Search of human proteins with 11612672

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11612672 phospholemman precursor [Homo sapiens]
         (92 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11612672 phospholemman precursor [Homo sapiens]                    186   5e-48
gi|11612670 phospholemman precursor [Homo sapiens]                    186   5e-48
gi|11612655 FXYD domain-containing ion transport regulator 6 [Ho...    79   6e-16
gi|169194724 PREDICTED: similar to FXYD domain-containing ion tr...    71   2e-13
gi|169194767 PREDICTED: similar to FXYD domain-containing ion tr...    71   2e-13
gi|169190389 PREDICTED: similar to FXYD domain-containing ion tr...    71   2e-13
gi|209862817 FXYD domain containing ion transport regulator 3 is...    64   2e-11
gi|209862809 FXYD domain containing ion transport regulator 3 is...    64   2e-11
gi|5174635 FXYD domain containing ion transport regulator 3 isof...    64   2e-11
gi|11125766 FXYD domain-containing ion transport regulator 2 iso...    62   1e-10
gi|11125764 FXYD domain-containing ion transport regulator 2 iso...    60   4e-10
gi|27764904 FXYD domain containing ion transport regulator 4 [Ho...    58   2e-09
gi|11612659 FXYD domain-containing ion transport regulator 7 [Ho...    56   7e-09
gi|209862819 FXYD domain containing ion transport regulator 3 is...    50   3e-07
gi|209862811 FXYD domain containing ion transport regulator 3 is...    50   3e-07
gi|11612674 FXYD domain containing ion transport regulator 3 iso...    50   3e-07
gi|47778938 FXYD domain-containing ion transport regulator 5 [Ho...    44   4e-05
gi|21618361 FXYD domain-containing ion transport regulator 5 [Ho...    44   4e-05
gi|188595665 FXYD domain-containing ion transport regulator 2 is...    37   0.004
gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor [...    32   0.14 
gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor [...    32   0.14 
gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor [...    32   0.14 
gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor [...    32   0.14 
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s...    28   1.6  
gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]         28   2.1  
gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]         28   2.1  
gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]         28   2.1  
gi|116295258 integrin alpha 2 precursor [Homo sapiens]                 27   2.7  
gi|239740931 PREDICTED: similar to UDP glucuronosyltransferase 2...    27   2.7  
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro...    27   3.5  

>gi|11612672 phospholemman precursor [Homo sapiens]
          Length = 92

 Score =  186 bits (471), Expect = 5e-48
 Identities = 92/92 (100%), Positives = 92/92 (100%)

Query: 1  MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC 60
          MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
Sbjct: 1  MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC 60

Query: 61 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 92
          RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
Sbjct: 61 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 92


>gi|11612670 phospholemman precursor [Homo sapiens]
          Length = 92

 Score =  186 bits (471), Expect = 5e-48
 Identities = 92/92 (100%), Positives = 92/92 (100%)

Query: 1  MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC 60
          MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
Sbjct: 1  MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC 60

Query: 61 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 92
          RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
Sbjct: 61 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 92


>gi|11612655 FXYD domain-containing ion transport regulator 6
          [Homo sapiens]
          Length = 95

 Score = 79.3 bits (194), Expect = 6e-16
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)

Query: 7  ILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
          +LVF   LL      + AE  KE DPF YDYQ+L+IGGLV A +LF +GIL++LSRRC+C
Sbjct: 4  VLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKC 63

Query: 63 KFNQQQRTGEPDEEEGTFRSSIRRLST 89
           FNQ+ R   P +EE    + I   +T
Sbjct: 64 SFNQKPRA--PGDEEAQVENLITANAT 88


>gi|169194724 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)

Query: 7  ILVFCVGLLT---MAKA-ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
          +L+F   LL    +A A E  K+ DPF YDYQ+L+I GLV A +LF +GIL++L  RC+C
Sbjct: 4  VLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63

Query: 63 KFNQQQRTGEPDEEEGTFRSSIRRLSTR 90
           FNQ+ RT  P EEE    + I   +T+
Sbjct: 64 SFNQKPRT--PGEEEAQVENLITANATK 89


>gi|169194767 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)

Query: 7  ILVFCVGLLT---MAKA-ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
          +L+F   LL    +A A E  K+ DPF YDYQ+L+I GLV A +LF +GIL++L  RC+C
Sbjct: 4  VLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63

Query: 63 KFNQQQRTGEPDEEEGTFRSSIRRLSTR 90
           FNQ+ RT  P EEE    + I   +T+
Sbjct: 64 SFNQKPRT--PGEEEAQVENLITANATK 89


>gi|169190389 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)

Query: 7  ILVFCVGLLT---MAKA-ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
          +L+F   LL    +A A E  K+ DPF YDYQ+L+I GLV A +LF +GIL++L  RC+C
Sbjct: 4  VLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63

Query: 63 KFNQQQRTGEPDEEEGTFRSSIRRLSTR 90
           FNQ+ RT  P EEE    + I   +T+
Sbjct: 64 SFNQKPRT--PGEEEAQVENLITANATK 89


>gi|209862817 FXYD domain containing ion transport regulator 3
          isoform 1 precursor [Homo sapiens]
          Length = 87

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 27/61 (44%), Positives = 42/61 (68%)

Query: 7  ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQ 66
          +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S +C+CKF Q
Sbjct: 8  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQ 67

Query: 67 Q 67
          +
Sbjct: 68 K 68


>gi|209862809 FXYD domain containing ion transport regulator 3
           isoform 3 [Homo sapiens]
          Length = 144

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 27/61 (44%), Positives = 42/61 (68%)

Query: 7   ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQ 66
           +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S +C+CKF Q
Sbjct: 65  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQ 124

Query: 67  Q 67
           +
Sbjct: 125 K 125


>gi|5174635 FXYD domain containing ion transport regulator 3
          isoform 1 precursor [Homo sapiens]
          Length = 87

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 27/61 (44%), Positives = 42/61 (68%)

Query: 7  ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQ 66
          +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S +C+CKF Q
Sbjct: 8  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQ 67

Query: 67 Q 67
          +
Sbjct: 68 K 68


>gi|11125766 FXYD domain-containing ion transport regulator 2
          isoform 1 [Homo sapiens]
          Length = 66

 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 15 LTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEP 73
          L+M    SPK + DPF YDY++++ GGL+ AG+ FI+G+LI+LSRR RC  N+++R    
Sbjct: 4  LSMDGGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINE 63

Query: 74 DE 75
          DE
Sbjct: 64 DE 65


>gi|11125764 FXYD domain-containing ion transport regulator 2
          isoform 2 [Homo sapiens]
          Length = 64

 Score = 60.1 bits (144), Expect = 4e-10
 Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 22 SPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDE 75
          SPK + DPF YDY++++ GGL+ AG+ FI+G+LI+LSRR RC  N+++R    DE
Sbjct: 9  SPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINEDE 63


>gi|27764904 FXYD domain containing ion transport regulator 4
          [Homo sapiens]
          Length = 89

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 15 LTMAKAESP--KEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGE 72
          LT  +A  P   + DPF YD+++LQ+ GL+  G+L I GI  VLS +C+CK +Q+Q +  
Sbjct: 14 LTALEANDPFANKDDPFYYDWKNLQLSGLICGGLLAIAGIAAVLSGKCKCKSSQKQHSPV 73

Query: 73 PDE 75
          P++
Sbjct: 74 PEK 76


>gi|11612659 FXYD domain-containing ion transport regulator 7
          [Homo sapiens]
          Length = 80

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 23/48 (47%), Positives = 36/48 (75%)

Query: 16 TMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCK 63
          T    ++P+E DPF YDY ++Q  G+ +A ILF+LGILIV+S++ +C+
Sbjct: 5  TQTPTKAPEEPDPFYYDYNTVQTVGMTLATILFLLGILIVISKKVKCR 52


>gi|209862819 FXYD domain containing ion transport regulator 3
          isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 50.4 bits (119), Expect = 3e-07
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 26/87 (29%)

Query: 7  ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSR-------- 58
          +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S         
Sbjct: 8  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQA 67

Query: 59 ------------------RCRCKFNQQ 67
                            +C+CKF Q+
Sbjct: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQK 94


>gi|209862811 FXYD domain containing ion transport regulator 3
          isoform4 precursor [Homo sapiens]
          Length = 96

 Score = 50.4 bits (119), Expect = 3e-07
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 26/87 (29%)

Query: 7  ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSR-------- 58
          +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S         
Sbjct: 8  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQA 67

Query: 59 ------------------RCRCKFNQQ 67
                            +C+CKF Q+
Sbjct: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQK 94


>gi|11612674 FXYD domain containing ion transport regulator 3
          isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 50.4 bits (119), Expect = 3e-07
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 26/87 (29%)

Query: 7  ILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSR-------- 58
          +LVF  G   +   +   ++ PF YD+ SLQ+GGL+ AG+L  +GI+IV+S         
Sbjct: 8  LLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQA 67

Query: 59 ------------------RCRCKFNQQ 67
                            +C+CKF Q+
Sbjct: 68 GRGWGSPPLTTQLSPTGAKCKCKFGQK 94


>gi|47778938 FXYD domain-containing ion transport regulator 5 [Homo
           sapiens]
          Length = 178

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 25  EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCR 61
           E DPF YD  +L+  GL++A +LFI GI+I+ S +CR
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167


>gi|21618361 FXYD domain-containing ion transport regulator 5 [Homo
           sapiens]
          Length = 178

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 25  EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCR 61
           E DPF YD  +L+  GL++A +LFI GI+I+ S +CR
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167


>gi|188595665 FXYD domain-containing ion transport regulator 2
           isoform 3 [Homo sapiens]
          Length = 145

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 14/27 (51%), Positives = 24/27 (88%)

Query: 32  DYQSLQIGGLVIAGILFILGILIVLSR 58
           DY++++ GGL+ AG+ FI+G+LI+LS+
Sbjct: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114


>gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor
           [Homo sapiens]
          Length = 1070

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 40  GLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEE 77
           G  +A I+ +LG++    +RC+ K  Q+Q  GE  E E
Sbjct: 710 GAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEME 747


>gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor
           [Homo sapiens]
          Length = 1014

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 40  GLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEE 77
           G  +A I+ +LG++    +RC+ K  Q+Q  GE  E E
Sbjct: 654 GAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEME 691


>gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor
           [Homo sapiens]
          Length = 940

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 40  GLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEE 77
           G  +A I+ +LG++    +RC+ K  Q+Q  GE  E E
Sbjct: 580 GAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEME 617


>gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor
           [Homo sapiens]
          Length = 1030

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 40  GLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEE 77
           G  +A I+ +LG++    +RC+ K  Q+Q  GE  E E
Sbjct: 670 GAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEME 707


>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
            sapiens]
          Length = 1634

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)

Query: 16   TMAKAESPKEHDPFT-----YDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRT 70
            T A++E  ++   FT     Y Y    I  L++ GIL IL IL+ L   C C      R 
Sbjct: 1556 TEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEIC-C-----HRR 1609

Query: 71   GEPDEEEGTFRSS 83
               ++EEG  R S
Sbjct: 1610 SLQEDEEGFSRDS 1622


>gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]
          Length = 1072

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 35  SLQIGGLVIAGILFILGIL--IVLSRRCRCKFNQQQRTGEPDEEE 77
           S+ IG  V+AGI+ ++ I+  +V++R CR K       G+ D E+
Sbjct: 879 SIVIG--VVAGIMTVILIILIVVMARYCRSKNKNGYEAGKKDHED 921


>gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]
          Length = 1200

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 35  SLQIGGLVIAGILFILGIL--IVLSRRCRCKFNQQQRTGEPDEEE 77
           S+ IG  V+AGI+ ++ I+  +V++R CR K       G+ D E+
Sbjct: 832 SIVIG--VVAGIMTVILIILIVVMARYCRSKNKNGYEAGKKDHED 874


>gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]
          Length = 1069

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 35  SLQIGGLVIAGILFILGIL--IVLSRRCRCKFNQQQRTGEPDEEE 77
           S+ IG  V+AGI+ ++ I+  +V++R CR K       G+ D E+
Sbjct: 879 SIVIG--VVAGIMTVILIILIVVMARYCRSKNKNGYEAGKKDHED 921


>gi|116295258 integrin alpha 2 precursor [Homo sapiens]
          Length = 1181

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 40   GLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGT 79
            G +IAGIL +L ++ +L +    K   ++ T  PDE + T
Sbjct: 1137 GSIIAGILLLLALVAILWKLGFFKRKYEKMTKNPDEIDET 1176


>gi|239740931 PREDICTED: similar to UDP glucuronosyltransferase 2
           family, polypeptide B10 [Homo sapiens]
          Length = 209

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 26  HDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPD 74
           HD   + Y SL + G ++A +  +L I+      C  KF ++ + G+ D
Sbjct: 161 HDLTWFQYHSLDVIGFLLACVATVLFIITKCCLFCFWKFARKGKKGKRD 209


>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular protein
            isoform 2 [Homo sapiens]
          Length = 1700

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 31   YDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEE---EGTFRSSIRRL 87
            Y Y    I  L++ GIL IL IL  L   C C     +R+ + DEE    G FR   RR 
Sbjct: 1576 YGYTDKLILALIVTGILTILIILFCLIVIC-C----HRRSLQEDEEGFSRGIFRFLPRRG 1630

Query: 88   STRRR 92
             + RR
Sbjct: 1631 CSSRR 1635


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.142    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,259,419
Number of Sequences: 37866
Number of extensions: 105738
Number of successful extensions: 411
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 38
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.