Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LOC100294331 Sequence: fasta or formatted (209aa) NCBI GI: 239740931
Description:

PREDICTED: similar to UDP glucuronosyltransferase 2 family, polypeptide B10

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         16           2
 C cysteine            2.4          5           2
 D aspartate           6.2         13           1
 E glutamate           1.9          4           1
 F phenylalanine       6.2         13           2
 G glycine             6.2         13           2
 H histidine           6.2         13           2
 I isoleucine          7.2         15           2
 K lysine              7.7         16           2
 L leucine             8.6         18           2
 M methionine          2.9          6           1
 N asparagine          4.3          9           1
 P proline             4.3          9           1
 Q glutamine           2.9          6           1
 R arginine            5.3         11           1
 S serine              3.3          7           2
 T threonine           5.3         11           1
 V valine              6.7         14           1
 W tryptophan          2.4          5           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to UDP glucuronosyltransferase 2... 
UGT2B10               0.895   UDP glucuronosyltransferase 2B10 isoform 2 
UGT2B10               0.895   UDP glucuronosyltransferase 2B10 isoform 1 
UGT2B11               0.873   UDP glucuronosyltransferase 2 family, polypeptide B11...
UGT2B7                0.864   UDP glucuronosyltransferase 2B7 
UGT2B28               0.835   UDP glucuronosyltransferase 2 family, polypeptide B2...
UGT2B4                0.830   UDP glucuronosyltransferase 2B4 
UGT2B17               0.782   UDP glucuronosyltransferase 2 family, polypeptide B17...
UGT2B15               0.778   UDP glycosyltransferase 2B15 
UGT2A1                0.727   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2A2                0.727   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2A3                0.696   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT1A1                0.553   UDP glycosyltransferase 1 family, polypeptide A1 prec...
UGT1A9                0.553   UDP glycosyltransferase 1 family, polypeptide A9 pre...
UGT1A6                0.553   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT1A6                0.553   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT1A7                0.553   UDP glycosyltransferase 1 family, polypeptide A7 pre...
UGT1A3                0.553   UDP glycosyltransferase 1 family, polypeptide A3 pre...
UGT1A10               0.553   UDP glycosyltransferase 1 family, polypeptide A10 pr...
UGT1A8                0.553   UDP glycosyltransferase 1 family, polypeptide A8 pre...
UGT1A4                0.553   UDP glycosyltransferase 1 family, polypeptide A4 prec...
UGT1A5                0.553   UDP glycosyltransferase 1 family, polypeptide A5 pre...
UGT8                  0.409   UDP-galactose-ceramide galactosyltransferase 8 [Hom...
UGT8                  0.409   UDP-galactose-ceramide galactosyltransferase 8 [Homo...
LOC100291758          0.390   PREDICTED: similar to UDP-glucuronosyltransferase 2...
LOC100289734          0.390   PREDICTED: hypothetical protein XP_002346669 
UGT3A1                0.258   UDP glycosyltransferase 3 family, polypeptide A1 [Ho...
UGT3A2                0.256   UDP glycosyltransferase 3 family, polypeptide A2 [Ho...
BRCA1                 0.007   breast cancer 1, early onset isoform 2 
BRCA1                 0.007   breast cancer 1, early onset isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press