Guide to the Human Genome
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Name: TOR1B Sequence: fasta or formatted (336aa) NCBI GI: 14149653
Description:

torsin family 1, member B (torsin B)

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         31           3
 C cysteine            1.8          6           2
 D aspartate           5.7         19           1
 E glutamate           5.7         19           2
 F phenylalanine       6.2         21           2
 G glycine             6.5         22           2
 H histidine           3.3         11           1
 I isoleucine          6.5         22           2
 K lysine              7.1         24           2
 L leucine            11.3         38           3
 M methionine          1.5          5           1
 N asparagine          4.2         14           2
 P proline             3.6         12           1
 Q glutamine           2.7          9           1
 R arginine            5.7         19           1
 S serine              5.1         17           1
 T threonine           3.6         12           1
 V valine              6.0         20           2
 W tryptophan          1.5          5           1
 Y tyrosine            3.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   torsin family 1, member B (torsin B) 
TOR1A                 0.673   torsin A 
TOR2A                 0.379   torsin family 2, member A isoform a 
TOR3A                 0.330   torsin family 3, member A 
TOR2A                 0.204   torsin family 2, member A isoform b 
TOR2A                 0.204   torsin family 2, member A isoform c 
C9orf167              0.070   hypothetical protein LOC54863 
CLPB                  0.050   caseinolytic peptidase B 
PEX6                  0.012   peroxisomal biogenesis factor 6 
LACE1                 0.008   lactation elevated 1 
GPN1                  0.006   GPN-loop GTPase 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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