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Search of human proteins with 11559925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3,
putative [Homo sapiens]
(507 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putati... 1036 0.0
gi|149589008 peptidase D [Homo sapiens] 161 1e-39
gi|40385867 methionine aminopeptidase 1D [Homo sapiens] 47 4e-05
gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, solubl... 46 9e-05
gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo sapi... 43 8e-04
gi|164420681 methionyl aminopeptidase 1 [Homo sapiens] 33 0.80
gi|157504499 ankyrin repeat domain 47 [Homo sapiens] 32 1.0
gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens] 30 4.0
gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo ... 30 5.2
gi|222136607 tetratricopeptide repeat domain 26 isoform 3 [Homo ... 30 5.2
gi|134152674 rabaptin, RAB GTPase binding effector protein 1 iso... 30 5.2
gi|5454180 zinc finger protein 193 [Homo sapiens] 30 5.2
gi|31377798 rabaptin, RAB GTPase binding effector protein 1 isof... 30 5.2
gi|58535455 androgen receptor isoform 2 [Homo sapiens] 30 6.8
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 30 6.8
gi|170172518 microtubule associated monoxygenase, calponin and L... 29 8.8
gi|209862793 microtubule associated monoxygenase, calponin and L... 29 8.8
gi|209862789 microtubule associated monoxygenase, calponin and L... 29 8.8
>gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putative
[Homo sapiens]
Length = 507
Score = 1036 bits (2680), Expect = 0.0
Identities = 507/507 (100%), Positives = 507/507 (100%)
Query: 1 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP 60
MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP
Sbjct: 1 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP 60
Query: 61 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN 120
GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN
Sbjct: 61 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN 120
Query: 121 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD 180
FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD
Sbjct: 121 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD 180
Query: 181 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI 240
EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI
Sbjct: 181 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI 240
Query: 241 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY 300
QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY
Sbjct: 241 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY 300
Query: 301 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL 360
PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL
Sbjct: 301 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL 360
Query: 361 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH 420
YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH
Sbjct: 361 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH 420
Query: 421 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV 480
HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV
Sbjct: 421 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV 480
Query: 481 TQDSPLILSADCPKEMNDIEQICSQAS 507
TQDSPLILSADCPKEMNDIEQICSQAS
Sbjct: 481 TQDSPLILSADCPKEMNDIEQICSQAS 507
>gi|149589008 peptidase D [Homo sapiens]
Length = 493
Score = 161 bits (407), Expect = 1e-39
Identities = 137/468 (29%), Positives = 215/468 (45%), Gaps = 53/468 (11%)
Query: 72 YALRRHKLMSLIQKEAQGQSGTDQTVVVLSN--PTYYMSNDIPYTFHQDNNFLYLCGFQE 129
+AL R +L ++K Q+G+ +VVL T D F Q++ F + G E
Sbjct: 23 FALNRQRLCERLRKNPAVQAGS---IVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTE 79
Query: 130 PDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVDEAYTLEEFQ 189
P V+ GK + LFVPR S W G + VD+ ++E
Sbjct: 80 PGCYGVIDVDTGK------STLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIA 133
Query: 190 HLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLIQRLRLIKSP 249
+L K + +R + S + + +K + + I R+ K+
Sbjct: 134 SVLTSQKPSVLLT----LRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTD 189
Query: 250 AEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGA-DILAYPPVVAGGN 308
E+E ++ K++S+A E M K ++E L + FE C +RG +Y + G
Sbjct: 190 MELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGE 249
Query: 309 RSNTLHY----VKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAELYEAV 364
S LHY N++ I++G+M L D G E C+ SDIT ++P NG+FTA Q +YEAV
Sbjct: 250 NSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAV 309
Query: 365 LEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMK-NIKENNAFKAARKYCPHHVG 423
L R + PG +++ + + ++L +GI+ ++ + PH +G
Sbjct: 310 LRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLG 369
Query: 424 HYLGMDVHDTPDMP-----------RSL----PLQPGMVITIEPGIYIPED--------- 459
H+LG+DVHD P RSL LQPGMV+T+EPGIY +
Sbjct: 370 HFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADP 429
Query: 460 ------DKDAPEKFRGL-GVRIEDDVVVTQDSPLILSADCPKEMNDIE 500
+++ ++FRG GVRIE+DVVVT DS + L P+ + +IE
Sbjct: 430 ARASFLNREVLQRFRGFGGVRIEEDVVVT-DSGIELLTCVPRTVEEIE 476
>gi|40385867 methionine aminopeptidase 1D [Homo sapiens]
Length = 335
Score = 47.0 bits (110), Expect = 4e-05
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 300 YPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAE 359
+P V + H + +++ ++DG+++ +D + Y D + T+ V G +
Sbjct: 147 FPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLV-GNVDECGKK 205
Query: 360 LYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCP 419
L E + + +A C G ++IG + +I N F+ CP
Sbjct: 206 LVEVARRCRDEAIAACRAGAPF--------SVIGNTIS------HITHQNGFQV----CP 247
Query: 420 HHVGHYLGMDVHDTPDM-----PRSLPLQPGMVITIEP 452
H VGH +G H P++ LP++ GM TIEP
Sbjct: 248 HFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTIEP 285
>gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
[Homo sapiens]
Length = 623
Score = 45.8 bits (107), Expect = 9e-05
Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 49/255 (19%)
Query: 244 RLIKSPAEIERMQIAGKLTSQAFIETMF-----TSKAPVEEAFLYAKFEFECRARGADI- 297
+ +K+ AE E M+ A + A E K V E K E E R + AD
Sbjct: 319 KAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAE-EFRRQQADFV 377
Query: 298 -LAYPPVVAGGNRSNTLHYV---KNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRF 353
L++P + + G +HY + N+ + E+ L+D G + +D+TRT G
Sbjct: 378 DLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHF-GTP 436
Query: 354 TAPQAELYEAVLEIQRDCLALCFP-GTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFK 412
TA + E + VL+ A FP GT ++ + + +
Sbjct: 437 TAYEKECFTYVLKGHIAVSAAVFPTGTKGH------------------LLDSFARSALWD 478
Query: 413 AARKYCPHHVGHYLG--MDVHDTP-----DMPRSLPLQPGMVITIEPGIYIPEDDKDAPE 465
+ Y H GH +G ++VH+ P PL+ GM++T EPG Y ED
Sbjct: 479 SGLDYL-HGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY--EDG----- 530
Query: 466 KFRGLGVRIEDDVVV 480
G+RIE+ V+V
Sbjct: 531 ---AFGIRIENVVLV 542
>gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo
sapiens]
Length = 674
Score = 42.7 bits (99), Expect = 8e-04
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
Query: 299 AYPPVVAGGNRSNTLHYVKNNQL---IKDGEMVLLDGGCESSCYVSDITRT--WPVNGRF 353
++ + A G + HY +L + EM LLD G + +DITRT W G
Sbjct: 415 SFETISASGLNAALAHYSPTKELNRKLSSDEMYLLDSGGQYWDGTTDITRTVHW---GTP 471
Query: 354 TAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKA 413
+A Q E Y VL D L FP + M+ + L D G+
Sbjct: 472 SAFQKEAYTRVLIGNIDLSRLIFPAATSGR---MVEAFARRALWDAGLNYG--------- 519
Query: 414 ARKYCPHHVGHYLG--MDVHDTP--DMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRG 469
H GH +G + VH+ P ++ + GM +IEPG Y KD
Sbjct: 520 ------HGTGHGIGNFLCVHEWPVGFQSNNIAMAKGMFTSIEPGYY-----KDGE----- 563
Query: 470 LGVRIEDDVVVTQ 482
G+R+ED +V +
Sbjct: 564 FGIRLEDVALVVE 576
>gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]
Length = 386
Score = 32.7 bits (73), Expect = 0.80
Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 39/258 (15%)
Query: 209 PSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIE 268
PS+ Q PL ++S+ ++G Q+ + S +IE M++ +L +
Sbjct: 100 PSYIQRPDYADHPL--GMSESEQALKGTSQI-----KLLSSEDIEGMRLVCRLAREVLDV 152
Query: 269 TMFTSKAPVEEAFLYAKFEFECRARGA-----DILAYPPVVAGGNRSNTLHYVKNNQLIK 323
K V + C AR + +P H + + + ++
Sbjct: 153 AAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQ 212
Query: 324 DGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLEN 383
+G++V +D + Y D+ T+ V G +L + E + PG
Sbjct: 213 EGDIVNVDITLYRNGYHGDLNETFFV-GEVDDGARKLVQTTYECLMQAIDAVKPGV---- 267
Query: 384 IYSMMLTLIGQKLKDLG-IMKNIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMPRSLP- 441
+ ++LG I++ + N F R YC GH + H P++P
Sbjct: 268 -----------RYRELGNIIQKHAQANGFSVVRSYC----GHGIHKLFHTAPNVPHYAKN 312
Query: 442 -----LQPGMVITIEPGI 454
++ G V TIEP I
Sbjct: 313 KAVGVMKSGHVFTIEPMI 330
>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
Length = 821
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 217 DYMQPLTEAKAKSKNKVRGVQQLIQRLR--------LIKSPAEIERMQIAGKLTSQAFIE 268
D P EA+A+ + +G +L RLR + P + A +L +Q +
Sbjct: 526 DIRDPEPEAEAEPQQVAQGRCELSPRLREACVALQRQLSRPRGVASDGGAVRLVAQEWFR 585
Query: 269 TMFTSKAPVEEAFLYAKFEFECRARGADILAYPPVVAGGNRSNTLHYVKNNQLIKDGEMV 328
++ E A+ R G ++LA+ +A GN + LHY ++ + ++
Sbjct: 586 VSSQRRSQAEPV---ARMLEGVRRLGPELLAHVVNLADGNGNTALHYSVSHGNLAIASLL 642
Query: 329 LLDGGCE 335
L G CE
Sbjct: 643 LDTGACE 649
>gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]
Length = 359
Score = 30.4 bits (67), Expect = 4.0
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 299 AYPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQA 358
A+P ++ G ++ L+Y+ Q K ++L + G E S + +
Sbjct: 9 AFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFG-EGSALEKSLA---------VSQGG 58
Query: 359 ELYEAVLEIQRDCLALCFPGTSLENIYSMM 388
ELYE LE++ CL + L I ++M
Sbjct: 59 ELYEEWLELRNGCLCCSVKDSGLRAIENLM 88
>gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo
sapiens]
Length = 554
Score = 30.0 bits (66), Expect = 5.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 146 SHKAILFVPRRDPSRELWDGPRSGTDG--AIALTGVDEAYTLEEFQHLL 192
S KA + R DP+ E W+G R G + + G + TL E HLL
Sbjct: 480 SAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLL 528
>gi|222136607 tetratricopeptide repeat domain 26 isoform 3 [Homo
sapiens]
Length = 523
Score = 30.0 bits (66), Expect = 5.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 146 SHKAILFVPRRDPSRELWDGPRSGTDG--AIALTGVDEAYTLEEFQHLL 192
S KA + R DP+ E W+G R G + + G + TL E HLL
Sbjct: 449 SAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLL 497
>gi|134152674 rabaptin, RAB GTPase binding effector protein 1
isoform 2 [Homo sapiens]
Length = 829
Score = 30.0 bits (66), Expect = 5.2
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 143 QLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMV 202
++ + KAI V + + R + +L V + T+ +++H +
Sbjct: 84 EMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKE-TVRDYEHQFHLRLEQERTQ 142
Query: 203 WYDWMRPSHAQLHSDYMQPLTEAKAKS--KNKVRGVQQLIQRLRLIKSPAEIERMQIAGK 260
W + + ++ +D + L+E + + +N+++ Q+ ++LR + P E E + K
Sbjct: 143 WAQYRESAEREI-ADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDK 201
Query: 261 LT-SQAFIETMFTSKAPVEEAFLYAKFEFECR 291
LT ++ I+ + SK V+E Y + E CR
Sbjct: 202 LTEAEDKIKELEASK--VKELNHYLEAEKSCR 231
>gi|5454180 zinc finger protein 193 [Homo sapiens]
Length = 394
Score = 30.0 bits (66), Expect = 5.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 440 LPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVVTQDSPLILSADCPK 494
+PL +T++ P+ D+ +K +G D+V T+D L+L DCPK
Sbjct: 156 VPLAEQTPLTLQSQPKEPQLTCDSAQKCHSIGET--DEVTKTEDRELVLRKDCPK 208
>gi|31377798 rabaptin, RAB GTPase binding effector protein 1 isoform
1 [Homo sapiens]
Length = 862
Score = 30.0 bits (66), Expect = 5.2
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 143 QLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMV 202
++ + KAI V + + R + +L V + T+ +++H +
Sbjct: 84 EMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKE-TVRDYEHQFHLRLEQERTQ 142
Query: 203 WYDWMRPSHAQLHSDYMQPLTEAKAKS--KNKVRGVQQLIQRLRLIKSPAEIERMQIAGK 260
W + + ++ +D + L+E + + +N+++ Q+ ++LR + P E E + K
Sbjct: 143 WAQYRESAEREI-ADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDK 201
Query: 261 LT-SQAFIETMFTSKAPVEEAFLYAKFEFECR 291
LT ++ I+ + SK V+E Y + E CR
Sbjct: 202 LTEAEDKIKELEASK--VKELNHYLEAEKSCR 231
>gi|58535455 androgen receptor isoform 2 [Homo sapiens]
Length = 388
Score = 29.6 bits (65), Expect = 6.8
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 19/101 (18%)
Query: 377 PGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAF-------KAARKYCPHHVGHYLGMD 429
P L Y +TL +KLK LG +K +E A + +K H+ Y
Sbjct: 81 PSCRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQKLTVSHIEGY---- 136
Query: 430 VHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGL 470
P+ ++ IEPG+ D + P+ F L
Sbjct: 137 --------ECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAAL 169
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 29.6 bits (65), Expect = 6.8
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 19/101 (18%)
Query: 377 PGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAF-------KAARKYCPHHVGHYLGMD 429
P L Y +TL +KLK LG +K +E A + +K H+ Y
Sbjct: 613 PSCRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQKLTVSHIEGY---- 668
Query: 430 VHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGL 470
P+ ++ IEPG+ D + P+ F L
Sbjct: 669 --------ECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAAL 701
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 29.3 bits (64), Expect = 8.8
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 30 RYSLQPVPERRIPNRYLGQPSPFTHPHLLRPGEV---------------TPGLSQVEYAL 74
+YS+ PV R PN + P HL GE TP L++ E
Sbjct: 462 QYSIDPVT--RYPNINVNFLRPSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVA 519
Query: 75 RRHKLMSLIQKEAQGQSGTDQTVVVLS 101
R KL+ Q++ G +G + T + +S
Sbjct: 520 RSSKLLGWCQRQTDGYAGVNVTDLTMS 546
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 29.3 bits (64), Expect = 8.8
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 30 RYSLQPVPERRIPNRYLGQPSPFTHPHLLRPGEV---------------TPGLSQVEYAL 74
+YS+ PV R PN + P HL GE TP L++ E
Sbjct: 462 QYSIDPVT--RYPNINVNFLRPSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVA 519
Query: 75 RRHKLMSLIQKEAQGQSGTDQTVVVLS 101
R KL+ Q++ G +G + T + +S
Sbjct: 520 RSSKLLGWCQRQTDGYAGVNVTDLTMS 546
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 29.3 bits (64), Expect = 8.8
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 30 RYSLQPVPERRIPNRYLGQPSPFTHPHLLRPGEV---------------TPGLSQVEYAL 74
+YS+ PV R PN + P HL GE TP L++ E
Sbjct: 462 QYSIDPVT--RYPNINVNFLRPSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVA 519
Query: 75 RRHKLMSLIQKEAQGQSGTDQTVVVLS 101
R KL+ Q++ G +G + T + +S
Sbjct: 520 RSSKLLGWCQRQTDGYAGVNVTDLTMS 546
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,854,716
Number of Sequences: 37866
Number of extensions: 988364
Number of successful extensions: 2059
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2041
Number of HSP's gapped (non-prelim): 26
length of query: 507
length of database: 18,247,518
effective HSP length: 107
effective length of query: 400
effective length of database: 14,195,856
effective search space: 5678342400
effective search space used: 5678342400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.