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Search of human proteins with 115583657
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115583657 hypothetical protein LOC150368 [Homo sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115583657 hypothetical protein LOC150368 [Homo sapiens] 536 e-153
gi|24432056 hypothetical protein LOC144717 [Homo sapiens] 140 8e-34
gi|38505170 Ras protein-specific guanine nucleotide-releasing fa... 48 1e-05
gi|224586880 Ras protein-specific guanine nucleotide-releasing f... 47 1e-05
gi|24797099 Ras protein-specific guanine nucleotide-releasing fa... 47 1e-05
gi|238859653 pleckstrin homology domain containing family A memb... 45 8e-05
gi|238859651 pleckstrin homology domain containing family A memb... 45 8e-05
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa... 39 0.006
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ... 37 0.017
gi|55770898 Rho GTPase activating protein 25 isoform a [Homo sap... 37 0.022
gi|7661882 Rho GTPase activating protein 25 isoform b [Homo sapi... 37 0.022
gi|8922333 pleckstrin homology domain containing, family J membe... 36 0.029
gi|82546824 forkhead box K1 [Homo sapiens] 35 0.085
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens] 34 0.15
gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo sapi... 33 0.19
gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo sapi... 33 0.19
gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo sapi... 33 0.19
gi|7019505 cytohesin 4 [Homo sapiens] 33 0.25
gi|4758968 cytohesin 3 [Homo sapiens] 33 0.32
gi|8670546 cytohesin 2 isoform 1 [Homo sapiens] 32 0.55
gi|4758964 cytohesin 1 isoform 1 [Homo sapiens] 32 0.55
gi|195972859 cytohesin 2 isoform 2 [Homo sapiens] 32 0.72
gi|110349763 cytohesin 1 isoform 2 [Homo sapiens] 32 0.72
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 31 0.94
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 30 2.1
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 30 2.1
gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo sa... 30 2.1
gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa... 30 2.1
>gi|115583657 hypothetical protein LOC150368 [Homo sapiens]
Length = 259
Score = 536 bits (1382), Expect = e-153
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG 60
MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG
Sbjct: 1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG 60
Query: 61 RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS 120
RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS
Sbjct: 61 RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS 120
Query: 121 FGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKPQAPNHRAAGLENGHCLSKDSS 180
FGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKPQAPNHRAAGLENGHCLSKDSS
Sbjct: 121 FGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKPQAPNHRAAGLENGHCLSKDSS 180
Query: 181 PVGLVEEAGSRSAGWGLAEWELQGPASLLLGKGQSPVSPETSCFSTLHDWYGQEIVELRQ 240
PVGLVEEAGSRSAGWGLAEWELQGPASLLLGKGQSPVSPETSCFSTLHDWYGQEIVELRQ
Sbjct: 181 PVGLVEEAGSRSAGWGLAEWELQGPASLLLGKGQSPVSPETSCFSTLHDWYGQEIVELRQ 240
Query: 241 CWQKRAQGSHSKCEEQDRP 259
CWQKRAQGSHSKCEEQDRP
Sbjct: 241 CWQKRAQGSHSKCEEQDRP 259
>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
Length = 249
Score = 140 bits (354), Expect = 8e-34
Identities = 102/258 (39%), Positives = 129/258 (50%), Gaps = 32/258 (12%)
Query: 1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG 60
MKLNERS+A YA D+P D+ GFL GG R WFVL+GN+LF FE
Sbjct: 1 MKLNERSLAFYATCDAPVDNAGFLYKKGGR------HAAYHRRWFVLRGNMLFYFEDAAS 54
Query: 61 RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS 120
R P+ +++LEGCTVEL EA EEFAFA+ F R ++LAAE A E WVK LSRAS
Sbjct: 55 REPVGVIILEGCTVELVEAA--EEFAFAVRFAGTRARTYVLAAESQDAMEGWVKALSRAS 112
Query: 121 FGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKPQA---PNHRAAGLENGHCLSK 177
F Y+RLVVRELE QL R + + +PQ+ P + L L
Sbjct: 113 FDYLRLVVRELEQQLAAVRGGGGM--------ALPQPQPQSLPLPPSLPSALAPVPSLPS 164
Query: 178 DSSPVGLVEEAGSRSA----GWGLAEWELQG--------PASLLLGKGQSPVSP-ETSCF 224
+PV + SA G A W + P + +P P + + F
Sbjct: 165 APAPVPALPLPRRPSALPPKENGCAVWSTEATFRPGPEPPPPPPRRRASAPHGPLDMAPF 224
Query: 225 STLHDWYGQEIVELRQCW 242
+ LH+ YGQEI LR W
Sbjct: 225 ARLHECYGQEIRALRGQW 242
>gi|38505170 Ras protein-specific guanine nucleotide-releasing
factor 2 [Homo sapiens]
Length = 1237
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAP-------------VPEEFAFAIC 90
WF L N+LF FE + P + +LEGC+ E AP + +++ F +
Sbjct: 43 WFALYQNVLFYFEGEQSCRPAGMYLLEGCSCERTPAPPRAGAGQGGVRDALDKQYYFTVL 102
Query: 91 FDAPGVRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQ 134
F G +P L E + W++ + +AS+ + L+ RE+ Q
Sbjct: 103 FGHEGQKPLELRCEEEQDGKEWMEAIHQASYADI-LIEREVLMQ 145
>gi|224586880 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 3 [Homo sapiens]
Length = 1257
Score = 47.4 bits (111), Expect = 1e-05
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVP---------EEFAFAICFDAP 94
WF L NLLF FES P L +LEGC + A +P P ++ F + F
Sbjct: 43 WFALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPALSAKEPLEKQHYFTVNFSHE 102
Query: 95 GVRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVA 154
+ L E + WV ++ AS+ R + E E+ +Q + LQ + K+VA
Sbjct: 103 NQKALELRTEDAKDCDEWVAAIAHASY---RTLATEHEALMQ--KYLHLLQIVETEKTVA 157
Query: 155 SRCKPQ 160
+ + Q
Sbjct: 158 KQLRQQ 163
>gi|24797099 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 1 [Homo sapiens]
Length = 1273
Score = 47.4 bits (111), Expect = 1e-05
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVP---------EEFAFAICFDAP 94
WF L NLLF FES P L +LEGC + A +P P ++ F + F
Sbjct: 43 WFALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPALSAKEPLEKQHYFTVNFSHE 102
Query: 95 GVRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVA 154
+ L E + WV ++ AS+ R + E E+ +Q + LQ + K+VA
Sbjct: 103 NQKALELRTEDAKDCDEWVAAIAHASY---RTLATEHEALMQ--KYLHLLQIVETEKTVA 157
Query: 155 SRCKPQ 160
+ + Q
Sbjct: 158 KQLRQQ 163
>gi|238859653 pleckstrin homology domain containing family A member
4 isoform 2 [Homo sapiens]
Length = 583
Score = 44.7 bits (104), Expect = 8e-05
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 41 RRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHL 100
+R WFVL G+ LF ++ + L V+L + P F + PG+R ++
Sbjct: 73 KRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYV 132
Query: 101 LAAEGPAAQEAWVKVLSRAS 120
LAA+ W++ L RAS
Sbjct: 133 LAADTLEDLRGWLRALGRAS 152
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 44.7 bits (104), Expect = 8e-05
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 41 RRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHL 100
+R WFVL G+ LF ++ + L V+L + P F + PG+R ++
Sbjct: 73 KRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYV 132
Query: 101 LAAEGPAAQEAWVKVLSRAS 120
LAA+ W++ L RAS
Sbjct: 133 LAADTLEDLRGWLRALGRAS 152
>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
sapiens]
Length = 748
Score = 38.5 bits (88), Expect = 0.006
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 25/111 (22%)
Query: 22 GFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPV 81
GF++TW WFVLKG+ L+ F+ + PL + L G V +E P
Sbjct: 31 GFVKTW-------------HTRWFVLKGDQLYYFKDEDETKPLGTIFLPGNKV--SEHPC 75
Query: 82 PEEFAFAICFD-APG---------VRPHLLAAEGPAAQEAWVKVLSRASFG 122
EE F+ PG +LL A E WVK + R +G
Sbjct: 76 NEENPGKFLFEVVPGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVIWG 126
>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
sapiens]
Length = 1048
Score = 37.0 bits (84), Expect = 0.017
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAA 103
WFVL LF ++ + + L + L V + + GVR + +A
Sbjct: 81 WFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSA 140
Query: 104 EGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKPQAPN 163
E P QEAW++ + A+ Q+ A++S+ R S + S P + +
Sbjct: 141 ESPEEQEAWIQAMGEAA-----------RVQIPPAQKSVPQAVRHSHEKPDSENVPPSKH 189
Query: 164 HR 165
H+
Sbjct: 190 HQ 191
>gi|55770898 Rho GTPase activating protein 25 isoform a [Homo
sapiens]
Length = 645
Score = 36.6 bits (83), Expect = 0.022
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTV-ELAEAPVPE-EFAFAIC-----FDAPGV 96
+FVL+ L+ ++ E P + L GCT+ E+A P +F F I + G
Sbjct: 67 YFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQ 126
Query: 97 RPHLLAAEGPAAQEAWVKVLSRAS 120
++L A A E WVK L R +
Sbjct: 127 DSYVLMASSQAEMEEWVKFLRRVA 150
>gi|7661882 Rho GTPase activating protein 25 isoform b [Homo
sapiens]
Length = 638
Score = 36.6 bits (83), Expect = 0.022
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTV-ELAEAPVPE-EFAFAIC-----FDAPGV 96
+FVL+ L+ ++ E P + L GCT+ E+A P +F F I + G
Sbjct: 60 YFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQ 119
Query: 97 RPHLLAAEGPAAQEAWVKVLSRAS 120
++L A A E WVK L R +
Sbjct: 120 DSYVLMASSQAEMEEWVKFLRRVA 143
>gi|8922333 pleckstrin homology domain containing, family J member 1
[Homo sapiens]
Length = 149
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG 60
M+ NE+ + ALS PA+ L G P +R L N LF F + E
Sbjct: 1 MRYNEKELQ--ALSRQPAEMAAELGMRG-----PKKGSVLKRRLVKLVVNFLFYFRTDEA 53
Query: 61 RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS 120
P+ ++LE C V E P F+ + D P + H + QE W++ L RAS
Sbjct: 54 E-PVGALLLERCRVVREE---PGTFSISFIED-PERKYHFECSSEEQCQE-WMEALRRAS 107
Query: 121 FGYMR 125
+ +MR
Sbjct: 108 YEFMR 112
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 34.7 bits (78), Expect = 0.085
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 131 LESQLQDARQSLALQRRSSWKSVASRCKPQAPNH------RAAGLENGHCLSKDSSPVGL 184
+E + RQ R+ + ++SR P +P H R+ GL+ CLS++ SP+
Sbjct: 390 VEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPTHPGLMSPRSGGLQTPECLSREGSPIPH 449
Query: 185 VEEAGSRSAGWGLAEWELQGPAS 207
E GS+ A + P S
Sbjct: 450 DPEFGSKLASVPEYRYSQSAPGS 472
>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
Length = 698
Score = 33.9 bits (76), Expect = 0.15
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 44 WFVLKGNLLFSFESREGRAPLSLVVLEGCTV-ELAEAPV-PEEFAFAICFDAPGVRPH-- 99
WFVL+G+ LF ++ ++ P + L+G V EL P P + F I G R
Sbjct: 58 WFVLRGDQLFYYKDKDEIKPQGFISLQGTQVTELPPGPEDPGKHLFEISPGGAGEREKVP 117
Query: 100 ------LLAAEGPAAQEAWVKVLSR 118
LL A E WV+ + R
Sbjct: 118 ANPEALLLMASSQRDMEDWVQAIRR 142
>gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
sapiens]
Length = 352
Score = 33.5 bits (75), Expect = 0.19
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 102 AAEGPAA--QEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKP 159
A E PAA Q ++ + G + LVVREL++ ++ R++ A +RR++W++ A C
Sbjct: 191 APEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREA-AERRRAAWEAKAGGC-G 248
Query: 160 QAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+ P AA + + K+ +G +++ R G
Sbjct: 249 RGPEWSAARRASREAVEKE---LGALQQCWERDGG 280
>gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
sapiens]
Length = 393
Score = 33.5 bits (75), Expect = 0.19
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 102 AAEGPAA--QEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKP 159
A E PAA Q ++ + G + LVVREL++ ++ R++ A +RR++W++ A C
Sbjct: 232 APEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREA-AERRRAAWEAKAGGC-G 289
Query: 160 QAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+ P AA + + K+ +G +++ R G
Sbjct: 290 RGPEWSAARRASREAVEKE---LGALQQCWERDGG 321
>gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo
sapiens]
Length = 426
Score = 33.5 bits (75), Expect = 0.19
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 102 AAEGPAA--QEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKP 159
A E PAA Q ++ + G + LVVREL++ ++ R++ A +RR++W++ A C
Sbjct: 265 APEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREA-AERRRAAWEAKAGGC-G 322
Query: 160 QAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+ P AA + + K+ +G +++ R G
Sbjct: 323 RGPEWSAARRASREAVEKE---LGALQQCWERDGG 354
>gi|7019505 cytohesin 4 [Homo sapiens]
Length = 394
Score = 33.1 bits (74), Expect = 0.25
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 39 TGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAP 80
T +R WF+L N L+ FE + P ++ LE +V+ + P
Sbjct: 275 TWKRRWFILTDNCLYYFEFTTDKEPRGIIPLENLSVQKVDDP 316
>gi|4758968 cytohesin 3 [Homo sapiens]
Length = 399
Score = 32.7 bits (73), Expect = 0.32
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 39 TGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAP 80
T +R WF+L N L+ FE + P ++ LE ++ E P
Sbjct: 280 TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDP 321
>gi|8670546 cytohesin 2 isoform 1 [Homo sapiens]
Length = 400
Score = 32.0 bits (71), Expect = 0.55
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 19 DHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAE 78
D G+L GG T +R WF+L N L+ FE + P ++ LE ++ +
Sbjct: 261 DREGWLLKLGGGRVK-----TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVD 315
Query: 79 AP 80
P
Sbjct: 316 DP 317
>gi|4758964 cytohesin 1 isoform 1 [Homo sapiens]
Length = 398
Score = 32.0 bits (71), Expect = 0.55
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 23/119 (19%)
Query: 19 DHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTV-ELA 77
D G+L GG T +R WF+L N L+ FE + P ++ LE ++ E+
Sbjct: 262 DREGWLLKLGGGRVK-----TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVE 316
Query: 78 EAPVPEEFAFAICFDAPGV-----------------RPHLLAAEGPAAQEAWVKVLSRA 119
++ P F I + V + ++A P +E W+K + A
Sbjct: 317 DSKKPNCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAA 375
>gi|195972859 cytohesin 2 isoform 2 [Homo sapiens]
Length = 399
Score = 31.6 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 39 TGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAP 80
T +R WF+L N L+ FE + P ++ LE ++ + P
Sbjct: 275 TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVDDP 316
>gi|110349763 cytohesin 1 isoform 2 [Homo sapiens]
Length = 397
Score = 31.6 bits (70), Expect = 0.72
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 18/99 (18%)
Query: 39 TGRRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTV-ELAEAPVPEEFAFAICFDAPGV- 96
T +R WF+L N L+ FE + P ++ LE ++ E+ ++ P F I + V
Sbjct: 276 TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVI 335
Query: 97 ----------------RPHLLAAEGPAAQEAWVKVLSRA 119
+ ++A P +E W+K + A
Sbjct: 336 KACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAA 374
>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
Length = 1462
Score = 31.2 bits (69), Expect = 0.94
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 41 RRCWFVLKGNLLFSFESREGRAPLSLVVLEGCTVELAEAPVPEE 84
++ WFV+KG +L+++ + E + L + L G T+ AP EE
Sbjct: 1381 KKLWFVIKGKVLYTYMASEDKVALESMPLLGFTI----APEKEE 1420
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 155 SRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+RC P+AP R LE G L + ++P+G V AGS G
Sbjct: 316 TRCPPRAPRLRR--LEAGRRLRRTAAPLGPVAGAGSSFGG 353
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 155 SRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+RC P+AP R LE G L + ++P+G V AGS G
Sbjct: 406 TRCPPRAPRLRR--LEAGRRLRRTAAPLGPVAGAGSSFGG 443
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 155 SRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
+RC P+AP R LE G L + ++P+G V AGS G
Sbjct: 406 TRCPPRAPRLRR--LEAGRRLRRTAAPLGPVAGAGSSFGG 443
>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
sapiens]
Length = 987
Score = 30.0 bits (66), Expect = 2.1
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 96 VRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSS------ 149
+R LL A G + + + Y++ + QL +R SL LQ ++S
Sbjct: 520 LRQELLKANGEIKHVSSLLAKVEKDYSYLKEICDHQAEQL--SRTSLKLQEKASESDAEI 577
Query: 150 --WKSVASRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGS 190
K + Q HRA L N +S+ S V +EE S
Sbjct: 578 KDMKETIFELEDQVEQHRAVKLHNNQLISELESSVIKLEEQKS 620
>gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo
sapiens]
Length = 709
Score = 30.0 bits (66), Expect = 2.1
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 96 VRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSS------ 149
+R LL A G + + + Y++ + QL +R SL LQ ++S
Sbjct: 520 LRQELLKANGEIKHVSSLLAKVEKDYSYLKEICDHQAEQL--SRTSLKLQEKASESDAEI 577
Query: 150 --WKSVASRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGS 190
K + Q HRA L N +S+ S V +EE S
Sbjct: 578 KDMKETIFELEDQVEQHRAVKLHNNQLISELESSVIKLEEQKS 620
>gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo
sapiens]
Length = 1068
Score = 30.0 bits (66), Expect = 2.1
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 96 VRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSS------ 149
+R LL A G + + + Y++ + QL +R SL LQ ++S
Sbjct: 601 LRQELLKANGEIKHVSSLLAKVEKDYSYLKEICDHQAEQL--SRTSLKLQEKASESDAEI 658
Query: 150 --WKSVASRCKPQAPNHRAAGLENGHCLSKDSSPVGLVEEAGS 190
K + Q HRA L N +S+ S V +EE S
Sbjct: 659 KDMKETIFELEDQVEQHRAVKLHNNQLISELESSVIKLEEQKS 701
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,979,976
Number of Sequences: 37866
Number of extensions: 597744
Number of successful extensions: 1784
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1748
Number of HSP's gapped (non-prelim): 51
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.