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Search of human proteins with 23397570
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23397570 phosphatidylinositol-specific phospholipase C, X
domain containing 2 isoform b [Homo sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23397570 phosphatidylinositol-specific phospholipase C, X dom... 627 e-180
gi|197333703 phosphatidylinositol-specific phospholipase C, X do... 598 e-171
gi|53828920 phosphatidylinositol-specific phospholipase C, X dom... 318 4e-87
gi|8922995 phosphatidylinositol-specific phospholipase C, X doma... 155 4e-38
gi|63003903 leucine rich repeat containing 10 [Homo sapiens] 33 0.31
gi|188219591 TIA1 protein isoform 2 [Homo sapiens] 32 0.70
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505294 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505292 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505290 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505286 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505284 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505282 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505280 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505278 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505276 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505274 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505272 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505270 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|38505268 voltage-dependent calcium channel alpha 1G subunit i... 31 1.6
gi|122937329 syncollin [Homo sapiens] 31 1.6
gi|197382708 eukaryotic translation initiation factor 4E family ... 30 2.0
gi|4503117 cystatin B [Homo sapiens] 30 3.5
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 29 5.9
>gi|23397570 phosphatidylinositol-specific phospholipase C, X domain
containing 2 isoform b [Homo sapiens]
Length = 304
Score = 627 bits (1616), Expect = e-180
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF 60
MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF
Sbjct: 1 MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF 60
Query: 61 SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK 120
SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK
Sbjct: 61 SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK 120
Query: 121 PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI 180
PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI
Sbjct: 121 PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI 180
Query: 181 QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV 240
QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV
Sbjct: 181 QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV 240
Query: 241 RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHRLALIPVYPLRF 300
RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHRLALIPVYPLRF
Sbjct: 241 RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHRLALIPVYPLRF 300
Query: 301 SRRS 304
SRRS
Sbjct: 301 SRRS 304
>gi|197333703 phosphatidylinositol-specific phospholipase C, X
domain containing 2 isoform a [Homo sapiens]
Length = 341
Score = 598 bits (1542), Expect = e-171
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF 60
MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF
Sbjct: 1 MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSF 60
Query: 61 SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK 120
SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK
Sbjct: 61 SYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSK 120
Query: 121 PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI 180
PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI
Sbjct: 121 PGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRI 180
Query: 181 QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV 240
QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV
Sbjct: 181 QEAFGNKLCPACSVESLTLRTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSV 240
Query: 241 RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHR 289
RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHR
Sbjct: 241 RKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVGGLKNTLVHR 289
>gi|53828920 phosphatidylinositol-specific phospholipase C, X domain
containing 3 [Homo sapiens]
Length = 321
Score = 318 bits (815), Expect = 4e-87
Identities = 140/270 (51%), Positives = 200/270 (74%), Gaps = 2/270 (0%)
Query: 22 SGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSFSYWVDEKSPVGPDQTQAIKRL 81
+ ++ +E+ ADWMA+LP +H++PL+NLAIPGSHDSFS+++DE SPVGP+Q + ++
Sbjct: 2 ASSQGKNELKLADWMATLPESMHSIPLTNLAIPGSHDSFSFYIDEASPVGPEQPETVQNF 61
Query: 82 ARI--SLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYFIHGLFGIKV 139
+ ++ KKLM+KW TQ + F QL AGIRYFDLR+S+KP D D E+YF HGLF KV
Sbjct: 62 VSVFGTVAKKLMRKWLATQTMNFTGQLGAGIRYFDLRISTKPRDPDNELYFAHGLFSAKV 121
Query: 140 WDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNKLCPACSVESLTL 199
+GL EI++FLT H +E++FLDFNHFY M + HH+ LV +++ +GNK+CPA + ++L
Sbjct: 122 NEGLEEINAFLTDHHKEVVFLDFNHFYGMQKYHHEKLVQMLKDIYGNKMCPAIFAQEVSL 181
Query: 200 RTLWEKNCQVLIFYHCPFYKQYPFLWPGKKIPAPWANTTSVRKLILFLETTLSERASRGS 259
+ LWEK+ QVL+FYH P + PFLWPG+ +PAPWANTT KLI FL+ +++ER +GS
Sbjct: 182 KYLWEKDYQVLVFYHSPVALEVPFLWPGQMMPAPWANTTDPEKLIQFLQASITERRKKGS 241
Query: 260 FHVSQAILTPRVKTIARGLVGGLKNTLVHR 289
F +SQ +LTP+ T+ +G+ GL+ T+ R
Sbjct: 242 FFISQVVLTPKASTVVKGVASGLRETITER 271
>gi|8922995 phosphatidylinositol-specific phospholipase C, X domain
containing 1 [Homo sapiens]
Length = 323
Score = 155 bits (392), Expect = 4e-38
Identities = 88/244 (36%), Positives = 143/244 (58%), Gaps = 8/244 (3%)
Query: 13 MGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSFSYWVDEKSPVGP 72
MG S + S ++ N DWM++L P L ++PL +L+IPGSHD+ +Y +++KSP+
Sbjct: 1 MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISH 60
Query: 73 DQTQAIKRL--ARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYF 130
++++ ++ L A + + ++ KWSVTQ L EQL+AG+RY DLR++ +++ ++F
Sbjct: 61 EESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHF 120
Query: 131 IHGLFGIK-VWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNKLC 189
+H ++ V D L EI +L +HP+E++ L +F + E H+ LV I+ FG+ LC
Sbjct: 121 VHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLC 180
Query: 190 PACSVESLTLRTLWEKNCQVLIFYHC-PFYKQYPFLWPGKKIPAPWANTTSVRKLILFLE 248
P V TLR LW + QV++ Y +++ LWPG +P W N LI +LE
Sbjct: 181 PRGEVP--TLRQLWSRGQQVIVSYEDESSLRRHHELWPG--VPYWWGNRVKTEALIRYLE 236
Query: 249 TTLS 252
T S
Sbjct: 237 TMKS 240
>gi|63003903 leucine rich repeat containing 10 [Homo sapiens]
Length = 277
Score = 33.1 bits (74), Expect = 0.31
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 156 EIIFLDFNHFYAMDETHHKCLVLRIQEAFGNKLCPACSVESL--TLRTLW-EKNC 207
+I+ LDFN+F A+ + L I NKLC S SL LRTLW E NC
Sbjct: 78 QILALDFNNFKALPQVVCTLKQLCILYLGNNKLCDLPSELSLLQNLRTLWIEANC 132
>gi|188219591 TIA1 protein isoform 2 [Homo sapiens]
Length = 386
Score = 32.0 bits (71), Expect = 0.70
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 227 GKKIPAPWANTTSVRKLILFLETTLSERASRGSFHVSQAILTPRVKT 273
GK++ WA T S +K T +S + S+ FHV L+P + T
Sbjct: 73 GKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITT 119
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505294 voltage-dependent calcium channel alpha 1G subunit
isoform 15 [Homo sapiens]
Length = 1555
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505292 voltage-dependent calcium channel alpha 1G subunit
isoform 3 [Homo sapiens]
Length = 2343
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505290 voltage-dependent calcium channel alpha 1G subunit
isoform 13 [Homo sapiens]
Length = 2243
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505286 voltage-dependent calcium channel alpha 1G subunit
isoform 10 [Homo sapiens]
Length = 2266
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505284 voltage-dependent calcium channel alpha 1G subunit
isoform 4 [Homo sapiens]
Length = 2332
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505282 voltage-dependent calcium channel alpha 1G subunit
isoform 8 [Homo sapiens]
Length = 2284
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505280 voltage-dependent calcium channel alpha 1G subunit
isoform 6 [Homo sapiens]
Length = 2306
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505278 voltage-dependent calcium channel alpha 1G subunit
isoform 11 [Homo sapiens]
Length = 2261
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505276 voltage-dependent calcium channel alpha 1G subunit
isoform 5 [Homo sapiens]
Length = 2321
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505274 voltage-dependent calcium channel alpha 1G subunit
isoform 7 [Homo sapiens]
Length = 2298
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505272 voltage-dependent calcium channel alpha 1G subunit
isoform 9 [Homo sapiens]
Length = 2273
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505270 voltage-dependent calcium channel alpha 1G subunit
isoform 2 [Homo sapiens]
Length = 2354
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|38505268 voltage-dependent calcium channel alpha 1G subunit
isoform 14 [Homo sapiens]
Length = 2171
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 128 IYFIHGLFGIKVWDGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNK 187
++FI G+ G+++W GL+ FL ++ + +D +Y + + G +
Sbjct: 221 VFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMR 280
Query: 188 LC 189
C
Sbjct: 281 SC 282
>gi|122937329 syncollin [Homo sapiens]
Length = 134
Score = 30.8 bits (68), Expect = 1.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 230 IPAPWANTTSVRKLILFLETTL-SERASRGSFHVSQAILTPRVKTIARGLVGGLKNTL 286
+P+ WANT S + E T+ S + G H A PR++ RG++G N +
Sbjct: 69 LPSNWANTASSLVVAPRCELTVWSRQGKAGKTHKFSAGTYPRLEEYRRGILGDWSNAI 126
>gi|197382708 eukaryotic translation initiation factor 4E family
member 3 isoform a [Homo sapiens]
Length = 224
Score = 30.4 bits (67), Expect = 2.0
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 36 MASLPPHLHNLPLSNLAIPGSHDSFSYWVDEKSPVGPDQTQAIKRLARISLVKKLMKKWS 95
+++L P +PL H S+++W+D P G + L +I V+ + WS
Sbjct: 37 LSALQPEPGGVPL--------HSSWTFWLDRSLP-GATAAECASNLKKIYTVQTVQIFWS 87
Query: 96 VTQNLTFREQLEAGIRYFDLRVSSKP 121
V N+ L Y +R +P
Sbjct: 88 VYNNIPPVTSLPLRCSYHLMRGERRP 113
>gi|4503117 cystatin B [Homo sapiens]
Length = 98
Score = 29.6 bits (65), Expect = 3.5
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 74 QTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYFIH 132
+TQ I R L +K KK+ V + ++F+ Q+ AG YF + GD D F+H
Sbjct: 15 ETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYF---IKVHVGDED----FVH 66
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 28.9 bits (63), Expect = 5.9
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 3 AVRKARRKLRM--GTICSPNPSGTKTSSEVCNADWMASLPPHL 43
A+R A+ +R+ ++CSPNP+ T TS +++ + PHL
Sbjct: 3434 AMRNAKEHVRLLPHSVCSPNPNTTSTSQSAASSN---NTYPHL 3473
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,707,980
Number of Sequences: 37866
Number of extensions: 495929
Number of successful extensions: 1467
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1426
Number of HSP's gapped (non-prelim): 40
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.