SYCN 2583

Name: SYCN	Sequence: fasta or formatted (134aa)		NCBI GI: 122937329
Description: syncollin		Referenced in: Pancreas and Insulin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 17 1 C cysteine 6.0 8 2 D aspartate 4.5 6 1 E glutamate 4.5 6 2 F phenylalanine 0.7 1 1 G glycine 7.5 10 2 H histidine 1.5 2 1 I isoleucine 1.5 2 1 K lysine 4.5 6 1 L leucine 12.7 17 3 M methionine 0.7 1 1 N asparagine 3.0 4 1 P proline 6.7 9 1 Q glutamine 1.5 2 1 R arginine 6.0 8 2 S serine 11.2 15 2 T threonine 4.5 6 1 V valine 3.0 4 2 W tryptophan 2.2 3 1 Y tyrosine 5.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syncollin PLCXD2 0.023 phosphatidylinositol-specific phospholipase C, X do... PLCXD2 0.023 phosphatidylinositol-specific phospholipase C, X dom... HIC2 0.019 hypermethylated in cancer 2 LRP4 0.019 low density lipoprotein receptor-related protein 4 ... LOC731282 0.016 PREDICTED: hypothetical protein CDH29 0.016 cadherin-like 29 VTN 0.012 vitronectin precursor FOLR1 0.008 folate receptor 1 precursor FOLR1 0.008 folate receptor 1 precursor FOLR1 0.008 folate receptor 1 precursor FOLR1 0.008 folate receptor 1 precursor FOLR1 0.008 folate receptor 1 precursor FOLR1 0.008 folate receptor 1 precursor UBL7 0.008 ubiquitin-like 7 UBL7 0.008 ubiquitin-like 7 HERC1 0.008 guanine nucleotide exchange factor p532 ZDHHC12 0.008 zinc finger, DHHC domain containing 12 TGFBI 0.008 transforming growth factor, beta-induced, 68kDa precu... ANLN 0.004 anillin, actin binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.