Guide to the Human Genome
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Name: CSTB Sequence: fasta or formatted (98aa) NCBI GI: 4503117
Description:

cystatin B

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2          8           1
 C cysteine            1.0          1           1
 D aspartate           4.1          4           1
 E glutamate           7.1          7           2
 F phenylalanine       7.1          7           1
 G glycine             3.1          3           1
 H histidine           5.1          5           1
 I isoleucine          2.0          2           1
 K lysine              9.2          9           2
 L leucine             6.1          6           1
 M methionine          2.0          2           2
 N asparagine          5.1          5           1
 P proline             5.1          5           1
 Q glutamine           7.1          7           1
 R arginine            2.0          2           1
 S serine              6.1          6           1
 T threonine           7.1          7           1
 V valine              9.2          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cystatin B 
CSTA                  0.463   cystatin A 
PLCXD2                0.028   phosphatidylinositol-specific phospholipase C, X do...
PLCXD2                0.028   phosphatidylinositol-specific phospholipase C, X dom...
ACIN1                 0.011   apoptotic chromatin condensation inducer 1 
CST3                  0.011   cystatin C precursor 
FETUB                 0.011   fetuin B 
TMEM129               0.006   transmembrane protein 129 isoform a 
TMEM129               0.006   transmembrane protein 129 isoform b 
RALBP1                0.006   ralA binding protein 1 
CLSTN1                0.006   calsyntenin 1 isoform 1 
CLSTN1                0.006   calsyntenin 1 isoform 2 
ANP32D                0.006   acidic nuclear phosphoprotein 32D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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