Search of human proteins with 23308587

Search of human proteins with 23308587

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308587 N-acetylglutamate synthase [Homo sapiens]
         (534 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23308587 N-acetylglutamate synthase [Homo sapiens]                1076   0.0  
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         39   0.016
gi|18699730 solute carrier family 16, member 10 [Homo sapiens]         38   0.020
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]     37   0.035
gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]       37   0.035
gi|148727255 microtubule associated serine/threonine kinase fami...    37   0.045
gi|7662236 TSC22 domain family, member 2 [Homo sapiens]                37   0.059
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    36   0.10 
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    36   0.10 
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]            36   0.10 
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    36   0.10 
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]            36   0.10 
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]            36   0.10 
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    36   0.10 
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]            36   0.10 
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            36   0.10 
gi|54873613 agrin [Homo sapiens]                                       35   0.13 
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          35   0.13 
gi|239754496 PREDICTED: hypothetical protein XP_002346014 [Homo ...    35   0.13 
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          35   0.13 
gi|239749056 PREDICTED: hypothetical protein XP_002346901 [Homo ...    35   0.13 
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          35   0.13 
gi|239743084 PREDICTED: hypothetical protein XP_002342735 [Homo ...    35   0.13 
gi|239508733 PREDICTED: hypothetical protein [Homo sapiens]            35   0.13 
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        35   0.13 
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]        35   0.17 
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    35   0.17 
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    35   0.17 
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    35   0.17 
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]            35   0.22 

>gi|23308587 N-acetylglutamate synthase [Homo sapiens]
          Length = 534

 Score = 1076 bits (2782), Expect = 0.0
 Identities = 534/534 (100%), Positives = 534/534 (100%)

Query: 1   MATALMAVVLRAAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPP 60
           MATALMAVVLRAAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPP
Sbjct: 1   MATALMAVVLRAAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPP 60

Query: 61  EEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEA 120
           EEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEA
Sbjct: 61  EEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEA 120

Query: 121 RHWLTQFQTCHHSADKPFAVIEVDEEVLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAP 180
           RHWLTQFQTCHHSADKPFAVIEVDEEVLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAP
Sbjct: 121 RHWLTQFQTCHHSADKPFAVIEVDEEVLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAP 180

Query: 181 TAPSGCLSFWEAKAQLAKSCKVLVDALRHNAAAAVPFFGGGSVLRAAEPAPHASYGGIVS 240
           TAPSGCLSFWEAKAQLAKSCKVLVDALRHNAAAAVPFFGGGSVLRAAEPAPHASYGGIVS
Sbjct: 181 TAPSGCLSFWEAKAQLAKSCKVLVDALRHNAAAAVPFFGGGSVLRAAEPAPHASYGGIVS 240

Query: 241 VETDLLQWCLESGSIPILCPIGETAARRSVLLDSLEVTASLAKALRPTKIIFLNNTGGLR 300
           VETDLLQWCLESGSIPILCPIGETAARRSVLLDSLEVTASLAKALRPTKIIFLNNTGGLR
Sbjct: 241 VETDLLQWCLESGSIPILCPIGETAARRSVLLDSLEVTASLAKALRPTKIIFLNNTGGLR 300

Query: 301 DSSHKVLSNVNLPADLDLVCNAEWVSTKERQQMRLIVDVLSRLPHHSSAVITAASTLLTE 360
           DSSHKVLSNVNLPADLDLVCNAEWVSTKERQQMRLIVDVLSRLPHHSSAVITAASTLLTE
Sbjct: 301 DSSHKVLSNVNLPADLDLVCNAEWVSTKERQQMRLIVDVLSRLPHHSSAVITAASTLLTE 360

Query: 361 LFSNKGSGTLFKNAERMLRVRSLDKLDQGRLVDLVNASFGKKLRDDYLASLRPRLHSIYV 420
           LFSNKGSGTLFKNAERMLRVRSLDKLDQGRLVDLVNASFGKKLRDDYLASLRPRLHSIYV
Sbjct: 361 LFSNKGSGTLFKNAERMLRVRSLDKLDQGRLVDLVNASFGKKLRDDYLASLRPRLHSIYV 420

Query: 421 SEGYNAAAILTMEPVLGGTPYLDKFVVSSSRQGQGSGQMLWECLRRDLQTLFWRSRVTNP 480
           SEGYNAAAILTMEPVLGGTPYLDKFVVSSSRQGQGSGQMLWECLRRDLQTLFWRSRVTNP
Sbjct: 421 SEGYNAAAILTMEPVLGGTPYLDKFVVSSSRQGQGSGQMLWECLRRDLQTLFWRSRVTNP 480

Query: 481 INPWYFKHSDGSFSNKQWIFFWFGLADIRDSYELVNHAKGLPDSFHKPASDPGS 534
           INPWYFKHSDGSFSNKQWIFFWFGLADIRDSYELVNHAKGLPDSFHKPASDPGS
Sbjct: 481 INPWYFKHSDGSFSNKQWIFFWFGLADIRDSYELVNHAKGLPDSFHKPASDPGS 534


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 8   VVLRAAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGAD 67
           + L   ++ PRLR           S  +R   AR  +    L T    P PPP   + + 
Sbjct: 140 IPLPVPSLLPRLRAWRTGKTVSPQSNSSRPTCARHLT----LGTGDGGPAPPPAPSSASS 195

Query: 68  DVSQSPVAEEPSWVPSPRPPVPHESPEPPSGR 99
             S SP +  PS  P P PP P   P PP+ R
Sbjct: 196 SPSPSPSSSSPSPPPPPPPPAP---PAPPAPR 224


>gi|18699730 solute carrier family 16, member 10 [Homo sapiens]
          Length = 515

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 39 AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSG 98
          +ARGTS  + L  A +   PPP    G  D  ++ V +    +  P    PHE PEPP G
Sbjct: 10 SARGTSEAQPLGPAPTGAAPPPGP--GPSDSPEAAVEKVEVELAGPATAEPHEPPEPPEG 67


>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
          Length = 498

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 23  GGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVP 82
           G   G    +C +  R ++ +SP  R S+A S   PP +E+      S+SP A  P   P
Sbjct: 341 GEKSGKGLKTCKSPGRKSKESSPKGRSSSASS---PPKKEHHHHHHHSESPKAPVPLLPP 397

Query: 83  SPRPPVPHESPEPPS 97
            P PP   ES E P+
Sbjct: 398 LPPPPPEPESSEDPT 412


>gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]
          Length = 486

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 23  GGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVP 82
           G   G    +C +  R ++ +SP  R S+A S   PP +E+      S+SP A  P   P
Sbjct: 329 GEKSGKGLKTCKSPGRKSKESSPKGRSSSASS---PPKKEHHHHHHHSESPKAPVPLLPP 385

Query: 83  SPRPPVPHESPEPPS 97
            P PP   ES E P+
Sbjct: 386 LPPPPPEPESSEDPT 400


>gi|148727255 microtubule associated serine/threonine kinase family
            member 4 isoform a [Homo sapiens]
          Length = 2434

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 66   ADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDI-QAFLNQCGASPGEARH 122
            A ++  SP+A  PS  P+P+P  P  SP P  G SL    I QAF ++  + P   RH
Sbjct: 1182 AGNIPLSPLARTPS--PTPQPTSPQRSPSPLLGHSLGNSKIAQAFPSKMHSPPTIVRH 1237


>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
          Length = 780

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 44  SPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSG 98
           +P +  S +  QPQPPP    GA   S +P+   P     P+P +    P  P G
Sbjct: 262 TPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQG 316



 Score = 30.0 bits (66), Expect = 5.5
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 12  AAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRL----STAWSQPQ----PPPEEY 63
           A + AP     G   G + +   A+    +G  PG +     +   +QP     P P   
Sbjct: 286 AQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPA 345

Query: 64  AGADDVSQSPVAEEPSWVPSPRPPVP--HESPEPPSGRS 100
            GA      P A++P     P+P +P  H  P  PSG+S
Sbjct: 346 VGA------PAAQQPQQFAYPQPQIPPGHLLPVQPSGQS 378


>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 17  PRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAE 76
           P +RGR G  G    S     R+     P    ST+ SQ  P P+  A A   SQ P+  
Sbjct: 197 PPVRGRAGPSGRAAASPPTPIRSVLAPQP----STSNSQRLPRPQG-AAAKSSSQLPI-- 249

Query: 77  EPSWVPSPRPPVPHESPEPPSGRSLVQRD 105
            PS +P P   +P  S   P GR  +  D
Sbjct: 250 -PSAIPRPASRMPLTSRSVPPGRGALPPD 277


>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 17  PRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAE 76
           P +RGR G  G    S     R+     P    ST+ SQ  P P+  A A   SQ P+  
Sbjct: 197 PPVRGRAGPSGRAAASPPTPIRSVLAPQP----STSNSQRLPRPQG-AAAKSSSQLPI-- 249

Query: 77  EPSWVPSPRPPVPHESPEPPSGRSLVQRD 105
            PS +P P   +P  S   P GR  +  D
Sbjct: 250 -PSAIPRPASRMPLTSRSVPPGRGALPPD 277


>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 38/142 (26%), Positives = 53/142 (37%), Gaps = 10/142 (7%)

Query: 12  AAAVAPRLRGRGGTGGARRLS--CGARRRAARGTSPGRRLSTAW-----SQPQPPPEEYA 64
           AAA    L G GG  GAR  +      R   R   P   +S  W     ++P  P    A
Sbjct: 85  AAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPISLRWRSGREARPGGPQAGRA 144

Query: 65  GADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEARHWL 124
           G D  +   +  +P+W P  +PP       P + R+           +C    GEAR   
Sbjct: 145 G-DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARR-- 201

Query: 125 TQFQTCHHSADKPFAVIEVDEE 146
           +  Q  H   ++P A   V  E
Sbjct: 202 SALQQLHGGGNRPSAPSRVAVE 223


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 26  GGARRL-SCGARRRA-ARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSW-VP 82
           GGA R+  CG RRR+  +GT PG RL +    P PP   Y     +S       P+  V 
Sbjct: 253 GGALRVRGCGGRRRSNGQGTQPGCRLLS----PAPPRRRYRKPLTLSFGGGVSSPTHPVV 308

Query: 83  SPRPPVPHESPEPPSG 98
           +PR   P   P  P+G
Sbjct: 309 APRRHFPRSVPRFPAG 324


>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 11/135 (8%)

Query: 13  AAVAPR-LRGRGGTGGARRLS--CGARRRAARGTSPGRRLSTAW-----SQPQPPPEEYA 64
           AA+ P  L G GG  GAR  +      R   R   P  ++S  W     ++P  P    A
Sbjct: 105 AAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRA 164

Query: 65  GADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEARHWL 124
           G D  +   +  +P+W P  +PP       P + R+           +C    GEAR   
Sbjct: 165 G-DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARR-- 221

Query: 125 TQFQTCHHSADKPFA 139
           +  Q  H   ++P A
Sbjct: 222 SALQQLHGGGNRPSA 236


>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 218

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 11/135 (8%)

Query: 13  AAVAPR-LRGRGGTGGARRLS--CGARRRAARGTSPGRRLSTAW-----SQPQPPPEEYA 64
           AA+ P  L G GG  GAR  +      R   R   P  ++S  W     ++P  P    A
Sbjct: 78  AAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRA 137

Query: 65  GADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEARHWL 124
           G D  +   +  +P+W P  +PP       P + R+           +C    GEAR   
Sbjct: 138 G-DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARR-- 194

Query: 125 TQFQTCHHSADKPFA 139
           +  Q  H   ++P A
Sbjct: 195 SALQQLHGGGNRPSA 209


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 26  GGARRL-SCGARRRA-ARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSW-VP 82
           GGA R+  CG RRR+  +GT PG RL +    P PP   Y     +S       P+  V 
Sbjct: 253 GGALRVRGCGGRRRSNGQGTQPGCRLLS----PAPPRRRYRKPLTLSFGGGVSSPTHPVV 308

Query: 83  SPRPPVPHESPEPPSG 98
           +PR   P   P  P+G
Sbjct: 309 APRRHFPRSVPRFPAG 324


>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 11/135 (8%)

Query: 13  AAVAPR-LRGRGGTGGARRLS--CGARRRAARGTSPGRRLSTAW-----SQPQPPPEEYA 64
           AA+ P  L G GG  GAR  +      R   R   P  ++S  W     ++P  P    A
Sbjct: 105 AAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRA 164

Query: 65  GADDVSQSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEARHWL 124
           G D  +   +  +P+W P  +PP       P + R+           +C    GEAR   
Sbjct: 165 G-DPKADQAMHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARR-- 221

Query: 125 TQFQTCHHSADKPFA 139
           +  Q  H   ++P A
Sbjct: 222 SALQQLHGGGNRPSA 236


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 26  GGARRL-SCGARRRA-ARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSW-VP 82
           GGA R+  CG RRR+  +GT PG RL +    P PP   Y     +S       P+  V 
Sbjct: 253 GGALRVRGCGGRRRSNGQGTQPGCRLLS----PAPPRRRYRKPLTLSFGGGVSSPTHPVV 308

Query: 83  SPRPPVPHESPEPPSG 98
           +PR   P   P  P+G
Sbjct: 309 APRRHFPRSVPRFPAG 324


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 11/79 (13%)

Query: 23   GGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAG------ADDVSQSPVAE 76
            G T GA  ++ GA    AR T+  R  S+A +   P P   +       A   ++ P   
Sbjct: 1259 GATSGA--IAAGA---TARATTASRLPSSAVTPRAPHPSHTSQPVAKTTAAPTTRRPPTT 1313

Query: 77   EPSWVPSPRPPVPHESPEP 95
             PS VP  RPP P + P+P
Sbjct: 1314 APSRVPGRRPPAPQQPPKP 1332


>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2790

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 51   TAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP-PVPH-----ESPEPPSGRSLVQR 104
            T  + P P PE    + +V   P +  P   PSP P PVP      E   PP   +  + 
Sbjct: 1311 TPEASPDPLPEPPLASVEVPDKP-SGSPGQPPSPAPSPVPEPDAQAEDVAPPPTMAEEEE 1369

Query: 105  DIQAFLNQCGASPGEARHWLTQFQTCHHSADK 136
                 L     +P ++RH LT  +T + + DK
Sbjct: 1370 GTTGELRSAEPAPADSRHPLTYRKTTNFALDK 1401


>gi|239754496 PREDICTED: hypothetical protein XP_002346014 [Homo
          sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 39 AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP 86
          A+ G    ++++ A   P PPP E  G     +  V + P W+ SP+P
Sbjct: 19 ASVGKKMAKKIAAAPPPPPPPPSERRGKRAEQKGAVGQRPDWIFSPQP 66


>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 51   TAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP-PVPH-----ESPEPPSGRSLVQR 104
            T  + P P PE    + +V   P +  P   PSP P PVP      E   PP   +  + 
Sbjct: 1227 TPEASPDPLPEPPLASVEVPDKP-SGSPGQPPSPAPSPVPEPDAQAEDVAPPPTMAEEEE 1285

Query: 105  DIQAFLNQCGASPGEARHWLTQFQTCHHSADK 136
                 L     +P ++RH LT  +T + + DK
Sbjct: 1286 GTTGELRSAEPAPADSRHPLTYRKTTNFALDK 1317


>gi|239749056 PREDICTED: hypothetical protein XP_002346901 [Homo
          sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 39 AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP 86
          A+ G    ++++ A   P PPP E  G     +  V + P W+ SP+P
Sbjct: 19 ASVGKKMAKKIAAAPPPPPPPPSERRGKRAEQKGAVGQRPDWIFSPQP 66


>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 51   TAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP-PVPH-----ESPEPPSGRSLVQR 104
            T  + P P PE    + +V   P +  P   PSP P PVP      E   PP   +  + 
Sbjct: 1227 TPEASPDPLPEPPLASVEVPDKP-SGSPGQPPSPAPSPVPEPDAQAEDVAPPPTMAEEEE 1285

Query: 105  DIQAFLNQCGASPGEARHWLTQFQTCHHSADK 136
                 L     +P ++RH LT  +T + + DK
Sbjct: 1286 GTTGELRSAEPAPADSRHPLTYRKTTNFALDK 1317


>gi|239743084 PREDICTED: hypothetical protein XP_002342735 [Homo
          sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 39 AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP 86
          A+ G    ++++ A   P PPP E  G     +  V + P W+ SP+P
Sbjct: 19 ASVGKKMAKKIAAAPPPPPPPPSERRGKRAEQKGAVGQRPDWIFSPQP 66


>gi|239508733 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 39 AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRP 86
          A+ G    ++++ A   P PPP E  G     +  V + P W+ SP+P
Sbjct: 19 ASVGKKMAKKIAAAPPPPPPPPSERRGKRAEQKGAVGQRPDWIFSPQP 66


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 12/59 (20%)

Query: 39  AARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPPS 97
           A RG+S GR++S A    QPP            +P AE  + +PSP P  P +SP  P+
Sbjct: 526 ARRGSSAGRKVSCAPPSMQPP------------APPAELAAPLPSPLPEQPLDSPAAPA 572


>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
          Length = 1488

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 13/99 (13%)

Query: 10   LRAAAVAPRLRGRGGTGG-ARRLSCGARRRAARGT---SPGRRLSTAWSQPQPPPEEYAG 65
            L+  A++  LR     G   RR S G+      G+   SP          P PPPEEY  
Sbjct: 1135 LKRGALSSSLRDLSDAGKRGRRNSVGSLDSTIEGSVISSPRPHQRMPPPPPPPPPEEYK- 1193

Query: 66   ADDVSQSPVAEEPSWV----PSPRPPVPHESPEPPSGRS 100
                SQ PV+   S++     S R   P + P PP+G++
Sbjct: 1194 ----SQRPVSNSSSFLGSLFGSKRGKGPFQMPPPPTGQA 1228


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 7/101 (6%)

Query: 2   ATALMAVVLRAAAVAPR----LRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQ 57
           A+A  A+ L A++ + R    + G GG   AR     AR   ARG   G  LS +  + +
Sbjct: 599 ASAEEAIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRK 658

Query: 58  PPPEEYAGADDVS---QSPVAEEPSWVPSPRPPVPHESPEP 95
           PPP + A    VS       A      PSP PP    +P P
Sbjct: 659 PPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 699


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 7/101 (6%)

Query: 2   ATALMAVVLRAAAVAPR----LRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQ 57
           A+A  A+ L A++ + R    + G GG   AR     AR   ARG   G  LS +  + +
Sbjct: 594 ASAEEAIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRK 653

Query: 58  PPPEEYAGADDVS---QSPVAEEPSWVPSPRPPVPHESPEP 95
           PPP + A    VS       A      PSP PP    +P P
Sbjct: 654 PPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 694


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 29/98 (29%), Positives = 34/98 (34%), Gaps = 21/98 (21%)

Query: 18  RLRGRGGTGGA--RRLSCGAR-----------------RRAARGTSPGRRLSTAWSQPQP 58
           R R RGG GG   RR   G R                  R   G  PG+        P P
Sbjct: 5   RFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQS-GPKPPIPPP 63

Query: 59  PPEEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPEPP 96
           PP +        Q P  + P   P P P  PH+  +PP
Sbjct: 64  PPHQQQQQPPPQQPPPQQPPPHQPPPHPQ-PHQQQQPP 100


>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 29/148 (19%)

Query: 12  AAAVAPRL-------RGRGGTGGARR--LSCGARRRAARGTSPGRRLSTAWSQPQPPPEE 62
           A ++ PRL       RGR    G  R   S G +RR  + + P RR  T  S   PPP  
Sbjct: 2   ATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP 61

Query: 63  YAGADDVS--QSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGA----- 115
                D +   SP    PS VP           +PP+  +   R   A    CGA     
Sbjct: 62  VPQLPDAALPLSPELRRPSTVPD----------QPPATDNRRSRMAPALSTVCGAHRPLA 111

Query: 116 -SPGEARHWLTQFQ-TCHHSAD-KPFAV 140
             PG A +   Q Q T H  A+ +P+A+
Sbjct: 112 PPPGRAANRSRQRQSTPHRPANWRPYAL 139


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,660,836
Number of Sequences: 37866
Number of extensions: 1191531
Number of successful extensions: 7579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 267
Number of HSP's that attempted gapping in prelim test: 6825
Number of HSP's gapped (non-prelim): 963
length of query: 534
length of database: 18,247,518
effective HSP length: 107
effective length of query: 427
effective length of database: 14,195,856
effective search space: 6061630512
effective search space used: 6061630512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.