Search of human proteins with 23097274

Search of human proteins with 23097274

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23097274 transmembrane protein 130 isoform b [Homo sapiens]
         (423 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23097274 transmembrane protein 130 isoform b [Homo sapiens]        872   0.0  
gi|197313779 transmembrane protein 130 isoform a [Homo sapiens]       863   0.0  
gi|197313781 transmembrane protein 130 isoform c [Homo sapiens]       607   e-174
gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor ...    50   5e-06
gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor...    46   6e-05
gi|5902084 silver homolog [Homo sapiens]                               40   0.003
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]           38   0.020
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]           38   0.020
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    33   0.64 
gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]            30   3.2  
gi|6005810 mitogen-activated protein kinase kinase kinase kinase...    30   3.2  
gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]              30   3.2  
gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]              30   3.2  
gi|24308414 solute carrier family 10, member 4 [Homo sapiens]          30   5.4  
gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]     30   5.4  
gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]     30   5.4  
gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens]      29   7.1  
gi|27894376 cell adhesion molecule with homology to L1CAM precur...    29   7.1  
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa...    29   7.1  
gi|19923084 polycystin-1L1 [Homo sapiens]                              29   9.2  

>gi|23097274 transmembrane protein 130 isoform b [Homo sapiens]
          Length = 423

 Score =  872 bits (2254), Expect = 0.0
 Identities = 423/423 (100%), Positives = 423/423 (100%)

Query: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS 60
           MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS
Sbjct: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS 60

Query: 61  LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV 120
           LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV
Sbjct: 61  LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV 120

Query: 121 ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD 180
           ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD
Sbjct: 121 ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD 180

Query: 181 FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE 240
           FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE
Sbjct: 181 FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE 240

Query: 241 TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN 300
           TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN
Sbjct: 241 TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN 300

Query: 301 LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM 360
           LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM
Sbjct: 301 LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM 360

Query: 361 TLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKT 420
           TLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKT
Sbjct: 361 TLRNATQQKDMVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKT 420

Query: 421 YTV 423
           YTV
Sbjct: 421 YTV 423


>gi|197313779 transmembrane protein 130 isoform a [Homo sapiens]
          Length = 435

 Score =  863 bits (2231), Expect = 0.0
 Identities = 423/435 (97%), Positives = 423/435 (97%), Gaps = 12/435 (2%)

Query: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS 60
           MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS
Sbjct: 1   MAQAVWSRLGRILWLACLLPWAPAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGS 60

Query: 61  LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV 120
           LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV
Sbjct: 61  LALPADAHLYRFHWIHTPLVLTGKMEKGLSSTIRVVGHVPGEFPVSVWVTAADCWMCQPV 120

Query: 121 ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD 180
           ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD
Sbjct: 121 ARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWD 180

Query: 181 FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE 240
           FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE
Sbjct: 181 FGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQE 240

Query: 241 TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN 300
           TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN
Sbjct: 241 TLRGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYN 300

Query: 301 LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM 360
           LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM
Sbjct: 301 LTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYM 360

Query: 361 TLRNATQQKDMVE------------NPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENH 408
           TLRNATQQKDMVE            NPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENH
Sbjct: 361 TLRNATQQKDMVEVADFDFSPMSDKNPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENH 420

Query: 409 GLLPPLYKSVKTYTV 423
           GLLPPLYKSVKTYTV
Sbjct: 421 GLLPPLYKSVKTYTV 435


>gi|197313781 transmembrane protein 130 isoform c [Homo sapiens]
          Length = 321

 Score =  607 bits (1564), Expect = e-174
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 131 EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 190
           EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE
Sbjct: 29  EFLVGDLVVTQNTSLPWPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTE 88

Query: 191 DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 250
           DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP
Sbjct: 89  DSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGP 148

Query: 251 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 310
           TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD
Sbjct: 149 TLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGD 208

Query: 311 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 370
           YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD
Sbjct: 209 YCFSIRAENIISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKD 268

Query: 371 MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV 423
           MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV
Sbjct: 269 MVENPEPPSGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV 321



 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)

Query: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28
          MAQAVWSRLGRILWLACLLPWAPAGVAA
Sbjct: 1  MAQAVWSRLGRILWLACLLPWAPAGVAA 28


>gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor
           [Homo sapiens]
          Length = 560

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 41/205 (20%)

Query: 150 SYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQM-VTEDSVVYYNYSIIGTFTVKL 208
           ++L    +    L+HDPS+FL  +   Y W FGD T + V+ +  V + Y + GTF++ L
Sbjct: 254 TFLKDLPIMFDVLIHDPSHFLNYSTINYKWSFGDNTGLFVSTNHTVNHTYVLNGTFSLNL 313

Query: 209 KVVA------------------------------EWEEVEPDATRAVKQKTGDFSASLKL 238
            V A                              E   + PD    +  + G F A++ +
Sbjct: 314 TVKAAAPGPCPPPPPPPRPSKPTPSLGPAGDNPLELSRI-PDENCQI-NRYGHFQATITI 371

Query: 239 QETLRGIQVLGPT--LIQTFQKMTVTLNFL----GSPPLTVCWRLK-PECLPLEEGECHP 291
            E +  + ++  T  L+      +  ++F+    GS P  VC  +  P C   +   C P
Sbjct: 372 VEGILEVNIIQMTDVLMPVPWPESSLIDFVVTCQGSIPTEVCTIISDPTCEITQNTVCSP 431

Query: 292 VSVASTA-YNLTHTFRDPGDYCFSI 315
           V V       +  TF   G YC ++
Sbjct: 432 VDVDEMCLLTVRRTFNGSGTYCVNL 456


>gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor
           [Homo sapiens]
          Length = 572

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 150 SYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQM-VTEDSVVYYNYSIIGTFTVKL 208
           ++L    +    L+HDPS+FL  +   Y W FGD T + V+ +  V + Y + GTF++ L
Sbjct: 254 TFLKDLPIMFDVLIHDPSHFLNYSTINYKWSFGDNTGLFVSTNHTVNHTYVLNGTFSLNL 313

Query: 209 KVVA 212
            V A
Sbjct: 314 TVKA 317


>gi|5902084 silver homolog [Homo sapiens]
          Length = 661

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 119 PVARGFVVLPITEFLVGDLVVTQNTSLPWPSS-YLTKTVLKVSFLLHDPSNFLKTALFLY 177
           P+A       IT+ +   + V+Q  +L   +  +L    L  +  LHDPS +L  A   Y
Sbjct: 199 PLAHSSSAFTITDQVPFSVSVSQLRALDGGNKHFLRNQPLTFALQLHDPSGYLAEADLSY 258

Query: 178 SWDFGDGT-QMVTEDSVVYYNYSIIGTFTVKLKVVA 212
           +WDFGD +  +++   VV + Y   G  T ++ + A
Sbjct: 259 TWDFGDSSGTLISRALVVTHTYLEPGPVTAQVVLQA 294


>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
          Length = 4302

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 176  LYSWDFGDGTQMVTEDS-VVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSA 234
            LY+WDFGDG+ ++T+      + Y+  GT+ V+L+V          A   V ++    S 
Sbjct: 1158 LYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTVSGAAAQADVRVFEELRGLSV 1217

Query: 235  SLKLQETLRGIQVLGPTLIQTFQKMTVTLNF-----LGSPPLTV 273
             + L    +G  V+    +QT   +T T +      L  P  TV
Sbjct: 1218 DMSL-AVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPEATV 1260



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 27/144 (18%)

Query: 177  YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASL 236
            Y WD GDG  +  E   V + Y+  G FTV+   VA W EV             +   ++
Sbjct: 1498 YLWDLGDGGWL--EGPEVTHAYNSTGDFTVR---VAGWNEV----------SRSEAWLNV 1542

Query: 237  KLQETLRGIQV-LGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVA 295
             ++  +RG+ V    T++     ++ + +      +   W L   C P+  G        
Sbjct: 1543 TVKRRVRGLVVNASRTVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGP------- 1595

Query: 296  STAYNLTHTFRDPGDYCFSIRAEN 319
                 +++TFR  G +   + AEN
Sbjct: 1596 ----TISYTFRSVGTFNIIVTAEN 1615



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 176  LYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSAS 235
            ++ W   D   +  ++ V    Y     F + L            A+  V   T +++ +
Sbjct: 964  VFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLT-----------ASNHVSNVTVNYNVT 1012

Query: 236  LKLQETLRGIQVLG-PTLIQTFQKMTVTLNFLGSPPLTVC--WRLKPECLPLEE-----G 287
            ++    ++G+QV   P ++     + +T   L    + V   W        L +      
Sbjct: 1013 VERMNRMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWTFGDGEQALHQFQPPYN 1072

Query: 288  ECHPVSVASTA-----YNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAV 341
            E  PV   S A     +N+ HT+  PG+Y  ++ A N      Q   + V  S    AV
Sbjct: 1073 ESFPVPDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAV 1131


>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
          Length = 4303

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 176  LYSWDFGDGTQMVTEDS-VVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSA 234
            LY+WDFGDG+ ++T+      + Y+  GT+ V+L+V          A   V ++    S 
Sbjct: 1158 LYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTVSGAAAQADVRVFEELRGLSV 1217

Query: 235  SLKLQETLRGIQVLGPTLIQTFQKMTVTLNF-----LGSPPLTV 273
             + L    +G  V+    +QT   +T T +      L  P  TV
Sbjct: 1218 DMSL-AVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPEATV 1260



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 27/144 (18%)

Query: 177  YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASL 236
            Y WD GDG  +  E   V + Y+  G FTV+   VA W EV             +   ++
Sbjct: 1498 YLWDLGDGGWL--EGPEVTHAYNSTGDFTVR---VAGWNEV----------SRSEAWLNV 1542

Query: 237  KLQETLRGIQV-LGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECHPVSVA 295
             ++  +RG+ V    T++     ++ + +      +   W L   C P+  G        
Sbjct: 1543 TVKRRVRGLVVNASRTVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGP------- 1595

Query: 296  STAYNLTHTFRDPGDYCFSIRAEN 319
                 +++TFR  G +   + AEN
Sbjct: 1596 ----TISYTFRSVGTFNIIVTAEN 1615



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 176  LYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSAS 235
            ++ W   D   +  ++ V    Y     F + L            A+  V   T +++ +
Sbjct: 964  VFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLT-----------ASNHVSNVTVNYNVT 1012

Query: 236  LKLQETLRGIQVLG-PTLIQTFQKMTVTLNFLGSPPLTVC--WRLKPECLPLEE-----G 287
            ++    ++G+QV   P ++     + +T   L    + V   W        L +      
Sbjct: 1013 VERMNRMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWTFGDGEQALHQFQPPYN 1072

Query: 288  ECHPVSVASTA-----YNLTHTFRDPGDYCFSIRAENIISKTHQYHKIQVWPSRIQPAV 341
            E  PV   S A     +N+ HT+  PG+Y  ++ A N      Q   + V  S    AV
Sbjct: 1073 ESFPVPDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAV 1131


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
            sapiens]
          Length = 2997

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 18/173 (10%)

Query: 108  WVTAADCWMCQPVARGFVVLPITE----FLVGD----LVVTQNTSLP-WPSSYLTKTVLK 158
            W    +C +   +  G  +  IT     +L G     LV+   +++P W   + T T L 
Sbjct: 983  WYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELN 1042

Query: 159  VSFLLHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKLKVVAE----- 213
            V  +++  S   +  + LY   F D    V + S  Y  ++II TF + L    E     
Sbjct: 1043 V--VVYHGSQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIP 1098

Query: 214  WEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGPTLIQTFQKMTVTLNFL 266
            W  V  D    +K +       LK+ +    + + G  L  T +++   L+FL
Sbjct: 1099 WRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL 1151


>gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]
          Length = 670

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 360 MTLRNATQQKDMVENPEP------PSGVRCCCQMCCGPF 392
           M+LR+     +  E PEP      PS V+ CCQ+CC  F
Sbjct: 101 MSLRSTFSLPEEEEEPEPLVFAEQPS-VKLCCQLCCSVF 138


>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
           isoform 2 [Homo sapiens]
          Length = 833

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 220 DATRAVKQKTGDFSASLKLQETLRGIQV--LGPT-LIQTFQKMTVTLNFLGSPPLTVCWR 276
           +A  AV    G   A  K      G+QV  LG   L+Q  +  T+T   LGSP L     
Sbjct: 751 EAVEAVAMVGGQLQAFWK-----HGVQVWALGSDQLLQELRDPTLTFRLLGSPRLECSGT 805

Query: 277 LKPECLPLEEGECHPVSVASTAYNLT 302
           + P C  L  G  +  + AS    +T
Sbjct: 806 ISPHCNLLLPGSSNSPASASRVAGIT 831


>gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]
          Length = 991

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 256 FQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECH---PVSVASTAYNLTHTFRDPGDYC 312
           F  +T++L +L SP +         C+ +  G+ H   P +  S + N+TH F  PG+  
Sbjct: 266 FDNVTISLTWLLSPYIG-----NLSCI-ISTGDSHTFDPYNPPSVSSNVTHQFTSPGE-- 317

Query: 313 FSIRAENIISKTHQYHKIQV 332
           F++ AE   S+ H   + QV
Sbjct: 318 FTVFAECTTSEWHVTAQRQV 337


>gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]
          Length = 2459

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 256 FQKMTVTLNFLGSPPLTVCWRLKPECLPLEEGECH---PVSVASTAYNLTHTFRDPGDYC 312
           F  +T++L +L SP +         C+ +  G+ H   P +  S + N+TH F  PG+  
Sbjct: 266 FDNVTISLTWLLSPYIG-----NLSCI-ISTGDSHTFDPYNPPSVSSNVTHQFTSPGE-- 317

Query: 313 FSIRAENIISKTHQYHKIQV 332
           F++ AE   S+ H   + QV
Sbjct: 318 FTVFAECTTSEWHVTAQRQV 337


>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
          Length = 437

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 23  PAGVAAGLYELNLTTDSPATTGAVVTISASLVAKDNGSLALPADAHLYRFHWIHTPLVL- 81
           P G  + L  ++L  D       ++TIS++L+A     + +P    +Y + WI+TP+V  
Sbjct: 178 PGGNLSNL--MSLLVDGDMNLSIIMTISSTLLAL----VLMPLCLWIYSWAWINTPIVQL 231

Query: 82  --TGKMEKGLSSTIRVVG 97
              G +   L ST+  +G
Sbjct: 232 LPLGTVTLTLCSTLIPIG 249


>gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]
          Length = 1086

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 100 PGEFPVSVWVTAADCWMCQPVARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKV 159
           PGE  ++    AA C  C+   +   VLP T+ LVG ++  +N       +Y    + +V
Sbjct: 148 PGEDVIASERAAALCNACELSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRV 207


>gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]
          Length = 1133

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 100 PGEFPVSVWVTAADCWMCQPVARGFVVLPITEFLVGDLVVTQNTSLPWPSSYLTKTVLKV 159
           PGE  ++    AA C  C+   +   VLP T+ LVG ++  +N       +Y    + +V
Sbjct: 148 PGEDVIASERAAALCNACELSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRV 207


>gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens]
          Length = 1326

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 27/114 (23%)

Query: 226  KQKTGDFSASLKLQETL------RGIQVLGPTLIQTFQKMTVTLNFLGSPPLTVCWRLKP 279
            K +  D SA LK  E        R +  L P  +   Q  T+T  FLG+P  TV      
Sbjct: 1191 KDQIQDLSAKLKPYEKKDWRHAPRFVTPLKPHTVLRGQDCTMTCAFLGNPRPTV------ 1244

Query: 280  ECLPLEEGECHPVSVASTAYNLTH----------TFRDPGDYCFSIRAENIISK 323
                L +G+ +  + +   YN T           T +D GDY  S+  EN + K
Sbjct: 1245 ---TLYKGDVNITANSKFWYNSTSGVCTLVIPTCTLKDSGDY--SVLVENELGK 1293


>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
           [Homo sapiens]
          Length = 1224

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 265 FLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENIISKT 324
           F  SP   V W+   E  PLE    H     +   N T T  D G Y  S   EN I KT
Sbjct: 463 FFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRT-TEEDAGSY--SCWVENAIGKT 519


>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
           sapiens]
          Length = 271

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/56 (32%), Positives = 25/56 (44%)

Query: 188 VTEDSVVYYNYSIIGTFTVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLR 243
           + E S++       G  TV +K    WE  +   T  V   TG+ S S+KL   LR
Sbjct: 174 IPEGSILATKQEYWGNGTVTVKSTCPWEGHKSTVTCHVSHLTGNKSLSVKLNSGLR 229


>gi|19923084 polycystin-1L1 [Homo sapiens]
          Length = 2849

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 177 YSWDFGDGTQMVTEDSVVYYNYSIIGTFTVKL 208
           Y WDFGDGT  +   S  +  YS  G FTV++
Sbjct: 622 YLWDFGDGTVSLGSSSSSHV-YSREGEFTVEV 652


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,830,422
Number of Sequences: 37866
Number of extensions: 748522
Number of successful extensions: 1793
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1758
Number of HSP's gapped (non-prelim): 45
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.