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Search of human proteins with 229577391
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229577391 pyridine nucleotide-disulphide oxidoreductase
domain 2 [Homo sapiens]
(581 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 1177 0.0
gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens] 53 9e-07
gi|50301238 glutathione reductase [Homo sapiens] 39 0.017
gi|4557735 monoamine oxidase A [Homo sapiens] 37 0.050
gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens] 37 0.050
gi|38202207 monoamine oxidase B [Homo sapiens] 36 0.11
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 35 0.15
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 35 0.25
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 35 0.25
gi|156139141 FAD-dependent oxidoreductase domain containing 2 [H... 34 0.32
gi|156139139 FAD-dependent oxidoreductase domain containing 2 [H... 34 0.32
gi|156416003 succinate dehydrogenase complex, subunit A, flavopr... 33 0.72
gi|183227703 mitochondrial translation optimization 1 homolog is... 33 0.72
gi|19882217 mitochondrial translation optimization 1 homolog iso... 33 0.72
gi|74024895 mitochondrial translation optimization 1 homolog iso... 33 0.72
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 32 2.1
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 32 2.1
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 31 3.6
gi|119943098 dihydropyrimidine dehydrogenase isoform 1 [Homo sap... 30 4.7
gi|239756165 PREDICTED: hypothetical protein [Homo sapiens] 30 4.7
gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo ... 30 4.7
gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo ... 30 4.7
gi|22035672 thioredoxin reductase 2 precursor [Homo sapiens] 30 4.7
gi|239756033 PREDICTED: hypothetical protein LOC283486 [Homo sap... 30 6.1
gi|62122911 interleukin 31 [Homo sapiens] 30 6.1
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2
[Homo sapiens]
Length = 581
Score = 1177 bits (3045), Expect = 0.0
Identities = 581/581 (100%), Positives = 581/581 (100%)
Query: 1 MAASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNT 60
MAASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNT
Sbjct: 1 MAASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNT 60
Query: 61 AVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFT 120
AVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFT
Sbjct: 61 AVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFT 120
Query: 121 PMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAA 180
PMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAA
Sbjct: 121 PMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAA 180
Query: 181 PVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPL 240
PVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPL
Sbjct: 181 PVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPL 240
Query: 241 KATLATDAVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATT 300
KATLATDAVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATT
Sbjct: 241 KATLATDAVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATT 300
Query: 301 HGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEE 360
HGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEE
Sbjct: 301 HGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEE 360
Query: 361 FLERISQLDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAF 420
FLERISQLDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAF
Sbjct: 361 FLERISQLDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAF 420
Query: 421 EDAMDGLPSHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYA 480
EDAMDGLPSHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYA
Sbjct: 421 EDAMDGLPSHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYA 480
Query: 481 DRVFDCIEVYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHS 540
DRVFDCIEVYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHS
Sbjct: 481 DRVFDCIEVYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHS 540
Query: 541 GYRCPLQGLYLCGSGAHPGGGVMGAAGRNAAHVAFRDLKSM 581
GYRCPLQGLYLCGSGAHPGGGVMGAAGRNAAHVAFRDLKSM
Sbjct: 541 GYRCPLQGLYLCGSGAHPGGGVMGAAGRNAAHVAFRDLKSM 581
>gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens]
Length = 610
Score = 52.8 bits (125), Expect = 9e-07
Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 43/417 (10%)
Query: 36 DAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLR 95
D VVIG+G GL AAA L + G V E+ GG T G +F + + +
Sbjct: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFG-KNGLEFDTGIHYIGRME 127
Query: 96 PQIYTDLELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKD 155
+ + + L + P+ S +L G + +K+ +S +
Sbjct: 128 -----EGSIGRFILDQITEGQLDWAPL-----SSPFDIMVLEGPN---GRKEYPMYSGEK 174
Query: 156 AQVFPKYEEFMHRLALAIDPLLDAAPVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQ 215
A + E+F A+ ID + V + H LL + L ++ L + G L +
Sbjct: 175 AYIQGLKEKFPQEEAI-IDKYIKLVKVVSSGAPHAILL-KFLPLPVVQLLDRCG--LLTR 230
Query: 216 LPRYYEVLTAPITKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLL--HHVMGGL 273
+ + T + +VL Q S L+A L+ +T H+ S + LL H++ GG
Sbjct: 231 FSPFLQASTQSLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYMKGGF 290
Query: 274 EGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNSEGCVQGVVLEDGTE- 332
Y +GG ++ G ++ T+ TV V ++S G GV ++ G E
Sbjct: 291 --------YPRGGSSEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHEL 342
Query: 333 --VRSKMVLSNTSPQITFLKLTP--QEWLPEEFLERISQLDTRSPVTKINVAVDRLPSFL 388
+ +V+SN T+ L P LP + + + + F+
Sbjct: 343 VNIYCPIVVSNAGLFNTYEHLLPGNARCLP----------GVKQQLGTVRPGLGMTSVFI 392
Query: 389 AAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLPSHRPVIELCIPSSLDPT 445
LP ++ + + + + + H P++ PS+ DPT
Sbjct: 393 CLRGTKEDLHLPSTNYYVYYDTDMDQAMERYVSMPREEAAEHIPLLFFAFPSAKDPT 449
>gi|50301238 glutathione reductase [Homo sapiens]
Length = 522
Score = 38.5 bits (88), Expect = 0.017
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 2 AASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTA 61
AA R L +A+A P + G YD +VIG G GL +A LG A
Sbjct: 34 AALTRALSRAMACRQEP--QPQGPPPAAGAVASYDYLVIGGGSGGLASARRAAELGARAA 91
Query: 62 VFERRHVIGGAAVTEEIIP 80
V E H +GG V +P
Sbjct: 92 VVE-SHKLGGTCVNVGCVP 109
>gi|4557735 monoamine oxidase A [Homo sapiens]
Length = 527
Score = 37.0 bits (84), Expect = 0.050
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 35 YDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
+D VVIG G +GL AA L GV+ V E R +GG T
Sbjct: 14 FDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYT 54
>gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens]
Length = 509
Score = 37.0 bits (84), Expect = 0.050
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 36 DAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLR 95
D VIG+G G VAA +LG T E+ +GG + IP S+ +
Sbjct: 43 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAH 102
Query: 96 PQIYTDLELKKHGLRLHL 113
+ + ++ +RL+L
Sbjct: 103 GKDFASRGIEMSEVRLNL 120
Score = 30.8 bits (68), Expect = 3.6
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 15 SPFPAWRRD------NTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHV 68
+PFP D +T A K VVIGAG G+ + QRLG + E
Sbjct: 188 TPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 247
Query: 69 IGGAAVTEEIIPGFK 83
+GG + EI F+
Sbjct: 248 VGGVGIDMEISKNFQ 262
>gi|38202207 monoamine oxidase B [Homo sapiens]
Length = 520
Score = 35.8 bits (81), Expect = 0.11
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 36 DAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
D VV+G G +G+ AA L G+N V E R +GG T
Sbjct: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45
>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
Length = 590
Score = 35.4 bits (80), Expect = 0.15
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 38 VVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLS 92
++IGAG GL AA L G+ V E + IGG ++ G R + +++
Sbjct: 254 IIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVN 308
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 34.7 bits (78), Expect = 0.25
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 38 VVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
++IG+G +GL AA LQ G++ + E R +GG T
Sbjct: 302 IIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 339
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 34.7 bits (78), Expect = 0.25
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 38 VVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
++IG+G +GL AA LQ G++ + E R +GG T
Sbjct: 282 IIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319
>gi|156139141 FAD-dependent oxidoreductase domain containing 2
[Homo sapiens]
Length = 684
Score = 34.3 bits (77), Expect = 0.32
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 33 PEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFER 65
P D V+GAG GL A +LQR G + AVFER
Sbjct: 29 PRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFER 61
>gi|156139139 FAD-dependent oxidoreductase domain containing 2
[Homo sapiens]
Length = 684
Score = 34.3 bits (77), Expect = 0.32
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 33 PEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFER 65
P D V+GAG GL A +LQR G + AVFER
Sbjct: 29 PRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFER 61
>gi|156416003 succinate dehydrogenase complex, subunit A,
flavoprotein precursor [Homo sapiens]
Length = 664
Score = 33.1 bits (74), Expect = 0.72
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTA 61
E+DAVV+GAG GL AA L G NTA
Sbjct: 61 EFDAVVVGAGGAGLRAAFGLSEAGFNTA 88
>gi|183227703 mitochondrial translation optimization 1 homolog
isoform c [Homo sapiens]
Length = 732
Score = 33.1 bits (74), Expect = 0.72
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 5 GRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFE 64
GR + + FP R + A P +D +VIG GH G AA R G T +
Sbjct: 8 GRWVAVSFTKQQFPLARLSSDSA-APRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLT 66
Query: 65 RR 66
R
Sbjct: 67 HR 68
>gi|19882217 mitochondrial translation optimization 1 homolog
isoform b [Homo sapiens]
Length = 717
Score = 33.1 bits (74), Expect = 0.72
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 5 GRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFE 64
GR + + FP R + A P +D +VIG GH G AA R G T +
Sbjct: 8 GRWVAVSFTKQQFPLARLSSDSA-APRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLT 66
Query: 65 RR 66
R
Sbjct: 67 HR 68
>gi|74024895 mitochondrial translation optimization 1 homolog
isoform a [Homo sapiens]
Length = 692
Score = 33.1 bits (74), Expect = 0.72
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 5 GRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFE 64
GR + + FP R + A P +D +VIG GH G AA R G T +
Sbjct: 8 GRWVAVSFTKQQFPLARLSSDSA-APRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLT 66
Query: 65 RR 66
R
Sbjct: 67 HR 68
>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
sapiens]
Length = 567
Score = 31.6 bits (70), Expect = 2.1
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 31 LKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
LKP+ +V+GAG GLVAA L G + E + IGG T
Sbjct: 57 LKPQR-VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFT 100
>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
Length = 589
Score = 31.6 bits (70), Expect = 2.1
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 31 LKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
LKP+ +V+GAG GLVAA L G + E + IGG T
Sbjct: 79 LKPQR-VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFT 122
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 30.8 bits (68), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 11 AVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGL 47
A AA P PAW EA GL+PE + G+G GL
Sbjct: 113 AAAAPPSPAWSEPEPEA--GLEPEREPGPAGSGEPGL 147
>gi|119943098 dihydropyrimidine dehydrogenase isoform 1 [Homo
sapiens]
Length = 1025
Score = 30.4 bits (67), Expect = 4.7
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 39 VIGAGHNGLVAAAYLQRLGV-NTAVFERRHVIGGAAVTEEIIPGFK 83
+ GAG + A++L RLG + +FE++ +GG + +E IP F+
Sbjct: 192 LFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE--IPQFR 235
>gi|239756165 PREDICTED: hypothetical protein [Homo sapiens]
Length = 270
Score = 30.4 bits (67), Expect = 4.7
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 125 EGAGSKVPRCLLLGTDMAENQKQIAQFSQ---KDAQVFPKYEEFMHRLALAIDPLLD-AA 180
EGA K+P LL+G AE+++ A+F + KD+++ P F+ +L P A+
Sbjct: 116 EGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSI--FLQKLREVTSPSSPLAS 173
Query: 181 PVDMAAFQHGSLLQRMRSL 199
P A + LL R R L
Sbjct: 174 PSTDAGCRSFFLLPRHRGL 192
>gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo
sapiens]
Length = 217
Score = 30.4 bits (67), Expect = 4.7
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 125 EGAGSKVPRCLLLGTDMAENQKQIAQFSQ---KDAQVFPKYEEFMHRLALAIDPLLD-AA 180
EGA K+P LL+G AE+++ A+F + KD+++ P F+ +L P A+
Sbjct: 63 EGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSI--FLQKLREVTSPSSPLAS 120
Query: 181 PVDMAAFQHGSLLQRMRSL 199
P A + LL R R L
Sbjct: 121 PSTDAGCRSFFLLPRHRGL 139
>gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo
sapiens]
Length = 217
Score = 30.4 bits (67), Expect = 4.7
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 125 EGAGSKVPRCLLLGTDMAENQKQIAQFSQ---KDAQVFPKYEEFMHRLALAIDPLLD-AA 180
EGA K+P LL+G AE+++ A+F + KD+++ P F+ +L P A+
Sbjct: 63 EGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSI--FLQKLREVTSPSSPLAS 120
Query: 181 PVDMAAFQHGSLLQRMRSL 199
P A + LL R R L
Sbjct: 121 PSTDAGCRSFFLLPRHRGL 139
>gi|22035672 thioredoxin reductase 2 precursor [Homo sapiens]
Length = 524
Score = 30.4 bits (67), Expect = 4.7
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFE--------RRHVIGGAAVTEEIIPGFKFS 85
+YD +V+G G GL A +LG AV + R +GG V IP
Sbjct: 39 DYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98
Query: 86 RASYLLSLLR 95
+A+ L L++
Sbjct: 99 QAALLGGLIQ 108
>gi|239756033 PREDICTED: hypothetical protein LOC283486 [Homo
sapiens]
Length = 123
Score = 30.0 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 7 GLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTA 61
G C +P PAW++ E+RG E + V G G V+ + + G +TA
Sbjct: 6 GRCLRAGPAPAPAWQKA-PESRGLCPEEVSSCVKGPGRGRWVSLGFAEGPGTHTA 59
>gi|62122911 interleukin 31 [Homo sapiens]
Length = 164
Score = 30.0 bits (66), Expect = 6.1
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 308 EKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEEFLERISQ 367
+K V ++Q S+ ++ V E G V L SP + +L+ I Q
Sbjct: 39 QKIVEELQSLSKMLLKDVEEEKGVLVSQNYTLPCLSPDAQPPNNIHSPAI-RAYLKTIRQ 97
Query: 368 LDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMD 425
LD +S + +I +D+L F AP P H+C + L + Q F + MD
Sbjct: 98 LDNKSVIDEIIEHLDKL-IFQDAPETNISVPTDTHECKRFI-----LTISQQFSECMD 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,996,565
Number of Sequences: 37866
Number of extensions: 1187068
Number of successful extensions: 2834
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2811
Number of HSP's gapped (non-prelim): 30
length of query: 581
length of database: 18,247,518
effective HSP length: 108
effective length of query: 473
effective length of database: 14,157,990
effective search space: 6696729270
effective search space used: 6696729270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.