BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|226823324 methenyltetrahydrofolate synthetase domain containing isoform 4 [Homo sapiens] (382 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|226823324 methenyltetrahydrofolate synthetase domain containi... 769 0.0 gi|226823322 methenyltetrahydrofolate synthetase domain containi... 764 0.0 gi|116875838 methenyltetrahydrofolate synthetase domain containi... 719 0.0 gi|226823319 methenyltetrahydrofolate synthetase domain containi... 715 0.0 gi|226823326 methenyltetrahydrofolate synthetase domain containi... 680 0.0 gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens] 41 0.002 gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... 38 0.013 gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] 37 0.023 gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 36 0.051 gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 35 0.15 gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] 34 0.25 gi|239753457 PREDICTED: hypothetical protein XP_002345662 [Homo ... 33 0.33 gi|239741918 PREDICTED: hypothetical protein XP_002342351 [Homo ... 33 0.33 gi|34222389 HpaII tiny fragments locus 9C [Homo sapiens] 33 0.33 gi|51173878 HpaII tiny fragments locus 9C [Homo sapiens] 33 0.33 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.43 gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2 [... 33 0.43 gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Ho... 33 0.43 gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 33 0.43 gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 33 0.56 gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 33 0.56 gi|4502271 Na+/K+ -ATPase alpha 2 subunit proprotein [Homo sapiens] 33 0.56 gi|14670268 RD RNA-binding protein [Homo sapiens] 33 0.56 gi|4759156 small nuclear ribonucleoprotein polypeptide A [Homo s... 32 0.73 gi|49355761 ELAV-like protein 3 isoform 1 [Homo sapiens] 32 0.95 gi|49355765 ELAV-like protein 3 isoform 2 [Homo sapiens] 32 0.95 gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 32 0.95 gi|4506903 splicing factor, arginine/serine-rich 9 [Homo sapiens] 32 0.95 gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 32 0.95 gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 32 1.2 >gi|226823324 methenyltetrahydrofolate synthetase domain containing isoform 4 [Homo sapiens] Length = 382 Score = 769 bits (1986), Expect = 0.0 Identities = 382/382 (100%), Positives = 382/382 (100%) Query: 1 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTART 60 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTART Sbjct: 1 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTART 60 Query: 61 IKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN 120 IKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN Sbjct: 61 IKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN 120 Query: 121 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV 180 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV Sbjct: 121 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV 180 Query: 181 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS 240 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS Sbjct: 181 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS 240 Query: 241 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG 300 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG Sbjct: 241 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG 300 Query: 301 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC 360 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC Sbjct: 301 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC 360 Query: 361 LQGLRLGTDTLRVALARQQRDK 382 LQGLRLGTDTLRVALARQQRDK Sbjct: 361 LQGLRLGTDTLRVALARQQRDK 382 >gi|226823322 methenyltetrahydrofolate synthetase domain containing isoform 2 [Homo sapiens] Length = 383 Score = 764 bits (1974), Expect = 0.0 Identities = 382/383 (99%), Positives = 382/383 (99%), Gaps = 1/383 (0%) Query: 1 MEPRA-GVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTAR 59 MEPRA GVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTAR Sbjct: 1 MEPRAVGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTAR 60 Query: 60 TIKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR 119 TIKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR Sbjct: 61 TIKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR 120 Query: 120 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI 179 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI Sbjct: 121 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI 180 Query: 180 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR 239 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR Sbjct: 181 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR 240 Query: 240 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE 299 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE Sbjct: 241 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE 300 Query: 300 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS 359 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS Sbjct: 301 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS 360 Query: 360 CLQGLRLGTDTLRVALARQQRDK 382 CLQGLRLGTDTLRVALARQQRDK Sbjct: 361 CLQGLRLGTDTLRVALARQQRDK 383 >gi|116875838 methenyltetrahydrofolate synthetase domain containing isoform 3 [Homo sapiens] Length = 382 Score = 719 bits (1857), Expect = 0.0 Identities = 356/382 (93%), Positives = 364/382 (95%) Query: 1 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTART 60 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKG+ A + + L F + Sbjct: 1 MEPRAGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQE 60 Query: 61 IKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN 120 +KV+PD P + R VL+SKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN Sbjct: 61 VKVDPDKPLEGVRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRN 120 Query: 121 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV 180 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV Sbjct: 121 YSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIV 180 Query: 181 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS 240 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS Sbjct: 181 HDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRS 240 Query: 241 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG 300 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG Sbjct: 241 LRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEG 300 Query: 301 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC 360 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC Sbjct: 301 APLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSC 360 Query: 361 LQGLRLGTDTLRVALARQQRDK 382 LQGLRLGTDTLRVALARQQRDK Sbjct: 361 LQGLRLGTDTLRVALARQQRDK 382 >gi|226823319 methenyltetrahydrofolate synthetase domain containing isoform 1 [Homo sapiens] Length = 383 Score = 715 bits (1845), Expect = 0.0 Identities = 356/383 (92%), Positives = 364/383 (95%), Gaps = 1/383 (0%) Query: 1 MEPRA-GVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTAR 59 MEPRA GVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKG+ A + + L F + Sbjct: 1 MEPRAVGVSKQDIREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQ 60 Query: 60 TIKVNPDAPQKSARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR 119 +KV+PD P + R VL+SKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR Sbjct: 61 EVKVDPDKPLEGVRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVR 120 Query: 120 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI 179 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI Sbjct: 121 NYSVPIGLDSRVLVDLVVVGSVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTI 180 Query: 180 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR 239 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR Sbjct: 181 VHDCQVVDIPEELVEEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILR 240 Query: 240 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE 299 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE Sbjct: 241 SLRAREQQAGKDVTLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGE 300 Query: 300 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS 359 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS Sbjct: 301 GAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVS 360 Query: 360 CLQGLRLGTDTLRVALARQQRDK 382 CLQGLRLGTDTLRVALARQQRDK Sbjct: 361 CLQGLRLGTDTLRVALARQQRDK 383 >gi|226823326 methenyltetrahydrofolate synthetase domain containing isoform 5 [Homo sapiens] Length = 363 Score = 680 bits (1754), Expect = 0.0 Identities = 337/363 (92%), Positives = 345/363 (95%) Query: 20 MESQNLADFPRPVHHRIPNFKGASHAAEQLPRLQAFKTARTIKVNPDAPQKSARFFVLES 79 MESQNLADFPRPVHHRIPNFKG+ A + + L F + +KV+PD P + R VL+S Sbjct: 1 MESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKPLEGVRLLVLQS 60 Query: 80 KKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRVLVDLVVVG 139 KKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRVLVDLVVVG Sbjct: 61 KKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRVLVDLVVVG 120 Query: 140 SVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIVHDCQVVDIPEELVEEHDIT 199 SVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIVHDCQVVDIPEELVEEHDIT Sbjct: 121 SVAVSEKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIVHDCQVVDIPEELVEEHDIT 180 Query: 200 VDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRSLRAREQQAGKDVTLQGEHQ 259 VDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRSLRAREQQAGKDVTLQGEHQ Sbjct: 181 VDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRSLRAREQQAGKDVTLQGEHQ 240 Query: 260 HLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLAADVYVGNLPGDARVS 319 HLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLAADVYVGNLPGDARVS Sbjct: 241 HLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLAADVYVGNLPGDARVS 300 Query: 320 DLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQ 379 DLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQ Sbjct: 301 DLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQ 360 Query: 380 RDK 382 RDK Sbjct: 361 RDK 363 >gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens] Length = 164 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 299 EGAPLAADVYVGNLPGDARVSDLKRALRELGSVPLRLTW--QGPRRRAFLHYPDSAAAQQ 356 + PL VYVGNL + ++L+RA G PLR W + P AF+ + D A Sbjct: 4 DSCPLDCKVYVGNLGNNGNKTELERAFGYYG--PLRSVWVARNPPGFAFVEFEDPRDAAD 61 Query: 357 AVSCLQGLRLGTDTLRVALARQQR 380 AV L G L +RV L+ ++ Sbjct: 62 AVRELDGRTLCGCRVRVELSNGEK 85 >gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant [Homo sapiens] Length = 616 Score = 38.1 bits (87), Expect = 0.013 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 307 VYVGNLPGDARVSDLKRALRELGS-VPLRLTWQ----GPRRRAFLHYPDSAAAQQAVSCL 361 V+VGN+P +A LK E+GS V RL + P+ F Y D A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 362 QGLRLGTDTLRVALARQQRDK 382 G LRV A +++K Sbjct: 78 NGREFSGRALRVDNAASEKNK 98 >gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] Length = 238 Score = 37.4 bits (85), Expect = 0.023 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Query: 307 VYVGNLPGDARVSDLKRALRELGSVPLRLTW--QGPRRRAFLHYPDSAAAQQAVSCLQGL 364 VYVGNL A +L+RA G PLR W + P AF+ + D A+ AV L G Sbjct: 13 VYVGNLGTGAGKGELERAFSYYG--PLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70 Query: 365 RLGTDTLRVALA 376 + +RV L+ Sbjct: 71 VICGSRVRVELS 82 >gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] Length = 577 Score = 36.2 bits (82), Expect = 0.051 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 307 VYVGNLPGDARVSDLKRALRELGS-VPLRLTWQ----GPRRRAFLHYPDSAAAQQAVSCL 361 V+VGN+P +A LK E+G V RL + P+ F Y D A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 362 QGLRLGTDTLRVALARQQRDK 382 G LRV A +++K Sbjct: 78 NGREFSGRALRVDNAASEKNK 98 >gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo sapiens] Length = 1584 Score = 34.7 bits (78), Expect = 0.15 Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 194 EEHDITVDYILTPTRVIATGCKRPKPMGITWFKISLEMMEKIPILRSLRAREQQ--AGKD 251 +E + Y++ PT AT RPKP + I ++ M + ++ A E A Sbjct: 1337 QEKALDTSYVILPT---ATATLRPKPKEEPKYSIHIDQMPQTRLIHLSTAPEASLPARSP 1393 Query: 252 VTLQGEHQHLPE-PGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLA 304 + Q PE P Q P PP P P ++E AP S G P A Sbjct: 1394 PSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGEPAA 1447 >gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] Length = 282 Score = 33.9 bits (76), Expect = 0.25 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 25/114 (21%) Query: 272 LSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLAADVYVGNLPGDARVSDLKRALRELGSV 331 +S GR PPD G T + V NL L+R + G V Sbjct: 1 MSCGRPPPDVDGMIT--------------------LKVDNLTYRTSPDSLRRVFEKYGRV 40 Query: 332 -----PLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQR 380 P + PR AF+ + D AQ A + + G L LRV +AR R Sbjct: 41 GDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGR 94 >gi|239753457 PREDICTED: hypothetical protein XP_002345662 [Homo sapiens] Length = 319 Score = 33.5 bits (75), Expect = 0.33 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 13/83 (15%) Query: 262 PEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPG----EGAPLAADVYVGNLPGDAR 317 PEPGCQ + + G P PET A+ P G E P D VG P D + Sbjct: 245 PEPGCQASRVIKGGLGPFIEVEPETGECSASAAPPAGQAGREVGPAGHDHRVGK-PEDGK 303 Query: 318 VSDLKRALRELGSVPLRLTWQGP 340 +RALR P+R W P Sbjct: 304 ----ERALR----APVRGPWLRP 318 >gi|239741918 PREDICTED: hypothetical protein XP_002342351 [Homo sapiens] Length = 319 Score = 33.5 bits (75), Expect = 0.33 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 13/83 (15%) Query: 262 PEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPG----EGAPLAADVYVGNLPGDAR 317 PEPGCQ + + G P PET A+ P G E P D VG P D + Sbjct: 245 PEPGCQASRVIKGGLGPFIEVEPETGECSASAAPPAGQAGREVGPAGHDHRVGK-PEDGK 303 Query: 318 VSDLKRALRELGSVPLRLTWQGP 340 +RALR P+R W P Sbjct: 304 ----ERALR----APVRGPWLRP 318 >gi|34222389 HpaII tiny fragments locus 9C [Homo sapiens] Length = 625 Score = 33.5 bits (75), Expect = 0.33 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 293 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 344 PG PG + + D++ N+P A SD++R L G P + G A Sbjct: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112 Query: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 381 F+ + +A +A+ L G L V LAR + D Sbjct: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149 >gi|51173878 HpaII tiny fragments locus 9C [Homo sapiens] Length = 625 Score = 33.5 bits (75), Expect = 0.33 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 293 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 344 PG PG + + D++ N+P A SD++R L G P + G A Sbjct: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112 Query: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 381 F+ + +A +A+ L G L V LAR + D Sbjct: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 33.1 bits (74), Expect = 0.43 Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 8/51 (15%) Query: 260 HLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAP--------GSPPGEGAP 302 HL P C PL P TP PET S A P SPP +G P Sbjct: 557 HLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLP 607 Score = 29.3 bits (64), Expect = 6.2 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 9/42 (21%) Query: 262 PEPGCQQTVPLSVGRRPPDTPGPETN------SMEAAPGSPP 297 P P T L RRPP TPGP+T+ ++ APG PP Sbjct: 844 PSPPASPT--LQAPRRPP-TPGPDTSVSGPRLTLALAPGPPP 882 >gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2 [Homo sapiens] Length = 201 Score = 33.1 bits (74), Expect = 0.43 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Query: 307 VYVGNLPGDARVSDLKRALRELGS---VPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQG 363 +YVGNLP D R D++ + G+ + L+ GP AF+ + D A+ AV G Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGP-PFAFVEFEDPRDAEDAVYGRDG 76 Query: 364 LRLGTDTLRVALARQQR 380 LRV R R Sbjct: 77 YDYDGYRLRVEFPRSGR 93 >gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Homo sapiens] Length = 248 Score = 33.1 bits (74), Expect = 0.43 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Query: 307 VYVGNLPGDARVSDLKRALRELGS---VPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQG 363 +YVGNLP D R D++ + G+ + L+ GP AF+ + D A+ AV G Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGP-PFAFVEFEDPRDAEDAVYGRDG 76 Query: 364 LRLGTDTLRVALARQQR 380 LRV R R Sbjct: 77 YDYDGYRLRVEFPRSGR 93 >gi|139394599 hypermethylated in cancer 2 [Homo sapiens] Length = 615 Score = 33.1 bits (74), Expect = 0.43 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 10/52 (19%) Query: 265 GCQQTVPLSVGRR----PPDTPGPETNSMEAAP------GSPPGEGAPLAAD 306 GC+Q + L + ++ PP TPGP +AA GSPP AP A+ Sbjct: 240 GCEQELGLDLSKKSPPLPPATPGPHLTPDDAAQLSDSQHGSPPAASAPPVAN 291 >gi|48255900 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a [Homo sapiens] Length = 1590 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%) Query: 244 REQQAGKDVTLQGEHQHLPEPGCQQTV-PLSVGRRPPDTPGPETNSMEA-------APGS 295 ++QQ + Q Q P+P QQ P V P PGPE + APG Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGG 285 Query: 296 PPGEGAPLAADVYVGNLPG 314 P P AA +PG Sbjct: 286 RPSPAPPAAAQPPAAAVPG 304 >gi|48255898 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b [Homo sapiens] Length = 1572 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%) Query: 244 REQQAGKDVTLQGEHQHLPEPGCQQTV-PLSVGRRPPDTPGPETNSMEA-------APGS 295 ++QQ + Q Q P+P QQ P V P PGPE + APG Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGG 285 Query: 296 PPGEGAPLAADVYVGNLPG 314 P P AA +PG Sbjct: 286 RPSPAPPAAAQPPAAAVPG 304 >gi|4502271 Na+/K+ -ATPase alpha 2 subunit proprotein [Homo sapiens] Length = 1020 Score = 32.7 bits (73), Expect = 0.56 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 16/138 (11%) Query: 86 PTPRLR-TGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRVLVDLVVVGSVAVS 144 PT +L GL + I PP A D + KC S G++ + + D + + G +S Sbjct: 576 PTEKLCFVGLMSMIDPPRAAVPDAVGKC-RSAGIK--VIMVTGDHPITAKAIAKGVGIIS 632 Query: 145 EKGWRIGKGEGYADLEYAMMVSMGAVSKETPVVTIVHDCQVVDIP----EELVEEHDITV 200 E E D+ + + M V+ +VH + D+ +E+++ H V Sbjct: 633 E------GNETVEDIAARLNIPMSQVNPREAKACVVHGSDLKDMTSEQLDEILKNHTEIV 686 Query: 201 DYILTPTR--VIATGCKR 216 +P + +I GC+R Sbjct: 687 FARTSPQQKLIIVEGCQR 704 >gi|14670268 RD RNA-binding protein [Homo sapiens] Length = 380 Score = 32.7 bits (73), Expect = 0.56 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 321 LKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQ 379 L+ A G++ + L+ PR AF+ Y +A QAV+ L G ++ + L+V +AR+Q Sbjct: 276 LRGAFSPFGNI-IDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 333 >gi|4759156 small nuclear ribonucleoprotein polypeptide A [Homo sapiens] Length = 282 Score = 32.3 bits (72), Expect = 0.73 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 3/127 (2%) Query: 254 LQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSMEAAPGSPPGEGAPLAADVYVGNLP 313 + G+ ++P PG L+ G+ PP P+ P + P P +++ NLP Sbjct: 157 MPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLP 216 Query: 314 GDARVSDLKRALREL-GSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRL-GTDTL 371 + L + G +RL G AF+ + + A A LQG ++ + + Sbjct: 217 EETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAM 275 Query: 372 RVALARQ 378 +++ A++ Sbjct: 276 KISFAKK 282 >gi|49355761 ELAV-like protein 3 isoform 1 [Homo sapiens] Length = 367 Score = 32.0 bits (71), Expect = 0.95 Identities = 14/33 (42%), Positives = 23/33 (69%) Query: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALAR 377 F++Y D A +A++ L GL+L T T++V+ AR Sbjct: 84 FVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR 116 >gi|49355765 ELAV-like protein 3 isoform 2 [Homo sapiens] Length = 360 Score = 32.0 bits (71), Expect = 0.95 Identities = 14/33 (42%), Positives = 23/33 (69%) Query: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALAR 377 F++Y D A +A++ L GL+L T T++V+ AR Sbjct: 84 FVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR 116 >gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] Length = 644 Score = 32.0 bits (71), Expect = 0.95 Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 20/112 (17%) Query: 253 TLQGEHQHLPEPGCQQTVPLSVGRRPPDTPGPETNSME-AAPGSPPGEGAPLAADVYVGN 311 TLQG+ P P PPD PG E+ ++ + P +P GE P A Sbjct: 22 TLQGQLPGAP--------PAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPR 73 Query: 312 LPGDARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQG 363 P R L+RA L L +G RRR F + A+ S +G Sbjct: 74 PPARPR---LERA--------LSLDDKGWRRRRFRGSQEDLEARNGTSPSRG 114 >gi|4506903 splicing factor, arginine/serine-rich 9 [Homo sapiens] Length = 221 Score = 32.0 bits (71), Expect = 0.95 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 307 VYVGNLPGDARVSDLKRALRELGSV-PLRL-TWQGPRRRAFLHYPDSAAAQQAVSCLQGL 364 +YVGNLP D R DL+ + G + + L G AF+ + D A+ A+ G Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75 Query: 365 RLGTDTLRVALAR 377 G LRV R Sbjct: 76 DYGQCRLRVEFPR 88 >gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sapiens] Length = 735 Score = 32.0 bits (71), Expect = 0.95 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 17/71 (23%) Query: 279 PDTPGPETNSME--------AAPGSPPGEGAPLAADVYVGNLPGDARVSDLKRALRELGS 330 P+ PGP+ S E AAP SPP + + + PG AR +K +++L Sbjct: 125 PEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKS-------PGPARRLSIK--MKKLPE 175 Query: 331 VPLRLTWQGPR 341 + RL+ +GPR Sbjct: 176 LRRRLSLRGPR 186 >gi|226495417 coiled-coil domain containing 102A [Homo sapiens] Length = 550 Score = 31.6 bits (70), Expect = 1.2 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 15/170 (8%) Query: 224 WFKISLEMMEKIPILRSLRAREQQAGKDVT--------LQGEHQHLPEPGCQQTVPLSVG 275 W K+ E +R LR R K++ QGE + + V Sbjct: 108 WSKVRAERNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGARGVA 167 Query: 276 RRPPDTPGPETNS---MEAAPGSPPGEGAPLAADVYVGNLPGDARVSDLKRALRELGSVP 332 + D P PE + PPG + + ++P ++ D A R LG+ Sbjct: 168 DQTRDGPEPEAEREPVRDVGSERPPGSQELELVESLLKSMPEESE--DCWEA-RSLGAGG 224 Query: 333 LRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRDK 382 R + G + R+ L + D+AA ++ S L LRL D + L +++ DK Sbjct: 225 PRGS-SGRQERSRLPWEDTAATEEEASKLTALRLRLDESQKVLLKEREDK 273 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,777,232 Number of Sequences: 37866 Number of extensions: 897370 Number of successful extensions: 4188 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 77 Number of HSP's that attempted gapping in prelim test: 4040 Number of HSP's gapped (non-prelim): 235 length of query: 382 length of database: 18,247,518 effective HSP length: 104 effective length of query: 278 effective length of database: 14,309,454 effective search space: 3978028212 effective search space used: 3978028212 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.