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Search of human proteins with 226443017
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226443017 GRAM domain containing 3 isoform 3 [Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226443017 GRAM domain containing 3 isoform 3 [Homo sapiens] 649 0.0
gi|226443028 GRAM domain containing 3 isoform 5 [Homo sapiens] 647 0.0
gi|226443022 GRAM domain containing 3 isoform 4 [Homo sapiens] 647 0.0
gi|226443011 GRAM domain containing 3 isoform 1 [Homo sapiens] 647 0.0
gi|226443007 GRAM domain containing 3 isoform 2 [Homo sapiens] 647 0.0
gi|60593095 GRAM domain containing 2 [Homo sapiens] 140 1e-33
gi|209969686 GRAM domain containing 1A isoform 2 [Homo sapiens] 100 1e-21
gi|92110010 GRAM domain containing 1A isoform 1 [Homo sapiens] 100 1e-21
gi|144227752 GRAM domain containing 1B [Homo sapiens] 94 2e-19
gi|187936935 GRAM domain containing 1C [Homo sapiens] 94 2e-19
gi|139394668 TBC1 domain family, member 9 (with GRAM domain) [Ho... 60 2e-09
gi|156231067 TBC1 domain family, member 8 [Homo sapiens] 54 1e-07
gi|45597177 TBC1 domain family, member 9B (with GRAM domain) iso... 47 2e-05
gi|45597175 TBC1 domain family, member 9B (with GRAM domain) iso... 47 2e-05
gi|38570103 TBC1 domain family, member 8B (with GRAM domain) iso... 44 2e-04
gi|38570101 TBC1 domain family, member 8B (with GRAM domain) iso... 44 2e-04
gi|67763814 death-inducing-protein [Homo sapiens] 38 0.014
gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens] 33 0.45
gi|39995071 exonuclease 1 isoform b [Homo sapiens] 32 1.0
gi|39995069 exonuclease 1 isoform a [Homo sapiens] 32 1.0
gi|18491016 exonuclease 1 isoform b [Homo sapiens] 32 1.0
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 31 1.7
gi|38788260 bromodomain PHD finger transcription factor isoform ... 31 1.7
gi|38788274 bromodomain PHD finger transcription factor isoform ... 31 1.7
gi|55741653 hypothetical protein LOC57691 [Homo sapiens] 31 1.7
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 31 1.7
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 31 1.7
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens] 30 2.3
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 30 2.3
gi|20336473 B-cell CLL/lymphoma 7B [Homo sapiens] 30 2.3
>gi|226443017 GRAM domain containing 3 isoform 3 [Homo sapiens]
Length = 328
Score = 649 bits (1674), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKIS 60
MYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKIS
Sbjct: 1 MYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKIS 60
Query: 61 IPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGN 120
IPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGN
Sbjct: 61 IPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGN 120
Query: 121 SPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDF 180
SPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDF
Sbjct: 121 SPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDF 180
Query: 181 HATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLH 240
HATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLH
Sbjct: 181 HATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLH 240
Query: 241 HILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVE 300
HILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVE
Sbjct: 241 HILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVE 300
Query: 301 VLCQELTANIVKLEKIQNNLQKLLENGD 328
VLCQELTANIVKLEKIQNNLQKLLENGD
Sbjct: 301 VLCQELTANIVKLEKIQNNLQKLLENGD 328
>gi|226443028 GRAM domain containing 3 isoform 5 [Homo sapiens]
Length = 416
Score = 647 bits (1669), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 2 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 61
YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI
Sbjct: 90 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 149
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 121
PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS
Sbjct: 150 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 209
Query: 122 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 181
PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH
Sbjct: 210 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 269
Query: 182 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 241
ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH
Sbjct: 270 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 329
Query: 242 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 301
ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV
Sbjct: 330 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 389
Query: 302 LCQELTANIVKLEKIQNNLQKLLENGD 328
LCQELTANIVKLEKIQNNLQKLLENGD
Sbjct: 390 LCQELTANIVKLEKIQNNLQKLLENGD 416
>gi|226443022 GRAM domain containing 3 isoform 4 [Homo sapiens]
Length = 440
Score = 647 bits (1669), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 2 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 61
YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI
Sbjct: 114 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 173
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 121
PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS
Sbjct: 174 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 233
Query: 122 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 181
PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH
Sbjct: 234 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 293
Query: 182 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 241
ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH
Sbjct: 294 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 353
Query: 242 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 301
ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV
Sbjct: 354 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 413
Query: 302 LCQELTANIVKLEKIQNNLQKLLENGD 328
LCQELTANIVKLEKIQNNLQKLLENGD
Sbjct: 414 LCQELTANIVKLEKIQNNLQKLLENGD 440
>gi|226443011 GRAM domain containing 3 isoform 1 [Homo sapiens]
Length = 447
Score = 647 bits (1669), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 2 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 61
YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI
Sbjct: 121 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 180
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 121
PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS
Sbjct: 181 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 240
Query: 122 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 181
PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH
Sbjct: 241 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 300
Query: 182 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 241
ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH
Sbjct: 301 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 360
Query: 242 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 301
ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV
Sbjct: 361 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 420
Query: 302 LCQELTANIVKLEKIQNNLQKLLENGD 328
LCQELTANIVKLEKIQNNLQKLLENGD
Sbjct: 421 LCQELTANIVKLEKIQNNLQKLLENGD 447
>gi|226443007 GRAM domain containing 3 isoform 2 [Homo sapiens]
Length = 432
Score = 647 bits (1669), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 2 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 61
YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI
Sbjct: 106 YKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISI 165
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 121
PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS
Sbjct: 166 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLENTSVGNS 225
Query: 122 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 181
PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH
Sbjct: 226 PNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSRDFH 285
Query: 182 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 241
ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH
Sbjct: 286 ATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHKVKSQKCPMLHH 345
Query: 242 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 301
ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV
Sbjct: 346 ILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAPSGLRSQVQFNVEV 405
Query: 302 LCQELTANIVKLEKIQNNLQKLLENGD 328
LCQELTANIVKLEKIQNNLQKLLENGD
Sbjct: 406 LCQELTANIVKLEKIQNNLQKLLENGD 432
>gi|60593095 GRAM domain containing 2 [Homo sapiens]
Length = 354
Score = 140 bits (354), Expect = 1e-33
Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 20/281 (7%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIP 62
K N +HKLF VP EE + + +CALQ++ L QG+L++S NW+CFH+ +FGKD K+ IP
Sbjct: 69 KYNQQYHKLFKDVPLEEVVLKVCSCALQRDFLLQGRLYISPNWLCFHASLFGKDIKVVIP 128
Query: 63 AFSVTLIKKTKTALLVPNALIIATVT-DRYIFVSLLSRDSTYKLLKSVCGHLENTSVGN- 120
SV +IKK K A L+PN L I T T +YIFVSLLSRDS Y LL+ VC HL+ +S +
Sbjct: 129 VVSVQMIKKHKMARLLPNGLAITTNTSQKYIFVSLLSRDSVYDLLRRVCTHLQPSSKKSL 188
Query: 121 -----SPNPSS-----AENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQ 170
S P S E +R PSS L D + D +
Sbjct: 189 SVREFSGEPESLEVLIPEMKWRKVCPSSRSLSLPDNIP----CIPPSSVDSTDSFFPSRK 244
Query: 171 TPESENSRDFHATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHK 230
P SE SR A+E+ P N P K L E +
Sbjct: 245 PPMSEKSRAQVASENGGRWAWPMPGWGPACPKKMPNCSPTAKNAVYEEDELEEEPRSTGE 304
Query: 231 VKSQKCPMLHHILIFYAIVVCALIISTFYMRYRINTLEEQL 271
++ + +L + +++C L++S+ Y+ +RI+ LE+QL
Sbjct: 305 LRLWD----YRLLKVFFVLICFLVMSSSYLAFRISRLEQQL 341
>gi|209969686 GRAM domain containing 1A isoform 2 [Homo sapiens]
Length = 713
Score = 100 bits (250), Expect = 1e-21
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 5 NMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAF 64
N F KLF +P E L ++CALQ+EIL QG+L++SENWICF+S +F +T ISI
Sbjct: 83 NEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWETTISIQLK 142
Query: 65 SVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLL 106
VT +KK KTA L+PNA+ I T ++++ F S +RD + L+
Sbjct: 143 EVTCLKKEKTAKLIPNAIQICTESEKHFFTSFGARDRCFLLI 184
>gi|92110010 GRAM domain containing 1A isoform 1 [Homo sapiens]
Length = 724
Score = 100 bits (250), Expect = 1e-21
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 5 NMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAF 64
N F KLF +P E L ++CALQ+EIL QG+L++SENWICF+S +F +T ISI
Sbjct: 90 NEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWETTISIQLK 149
Query: 65 SVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLL 106
VT +KK KTA L+PNA+ I T ++++ F S +RD + L+
Sbjct: 150 EVTCLKKEKTAKLIPNAIQICTESEKHFFTSFGARDRCFLLI 191
>gi|144227752 GRAM domain containing 1B [Homo sapiens]
Length = 738
Score = 93.6 bits (231), Expect = 2e-19
Identities = 42/102 (41%), Positives = 68/102 (66%)
Query: 5 NMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAF 64
N F KLF +P E L ++CALQ++IL QG+L++SENWICF+S +F +T +++
Sbjct: 95 NEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLK 154
Query: 65 SVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLL 106
+ + K KTA L+PNA+ + T ++++ F S +RD TY ++
Sbjct: 155 DICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMM 196
>gi|187936935 GRAM domain containing 1C [Homo sapiens]
Length = 662
Score = 93.6 bits (231), Expect = 2e-19
Identities = 42/99 (42%), Positives = 66/99 (66%)
Query: 5 NMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAF 64
N + + F +P E L + CALQ++IL QG+L++SENW+CF+S +F +T ISI
Sbjct: 68 NEEYRRQFTHLPDTERLIADYACALQRDILLQGRLYLSENWLCFYSNIFRWETTISIALK 127
Query: 65 SVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTY 103
++T + K KTA L+PNA+ I T ++++ F S +RD +Y
Sbjct: 128 NITFMTKEKTARLIPNAIQIVTESEKFFFTSFGARDRSY 166
>gi|139394668 TBC1 domain family, member 9 (with GRAM domain) [Homo
sapiens]
Length = 1266
Score = 60.5 bits (145), Expect = 2e-09
Identities = 33/108 (30%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISI 61
+A + FH+LF +P EE L ++C+ K ++ QG +++S N +CF+S + G++ K+ I
Sbjct: 143 EAIVKFHRLF-GMPEEEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFYSFLMGREAKLVI 201
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSV 109
+T ++K T LL+P+ + ++T + + F L+ + T+KL++ +
Sbjct: 202 RWVDITQLEKNAT-LLLPDVIKVSTRSSEHFFSVFLNINETFKLMEQL 248
Score = 44.7 bits (104), Expect = 1e-04
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQ---KEILYQGKLFVSENWICFHSKVFGKDTKI 59
+A ++ +P +E L C L ++ G++FVS N+ICF SK + I
Sbjct: 289 RAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLI 348
Query: 60 SIPAFSVTLIKKTKTALLVPNALIIATVTD-RYIFVSLLSRDSTYKLLKSVCGHLENTSV 118
IP VT+++K ++ ++P+ L I+T ++F +L RD L++ + L+ T+
Sbjct: 349 -IPLREVTIVEKADSSSVLPSPLSISTRNRMTFLFANLKDRDF---LVQRISDFLQQTT- 403
Query: 119 GNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTPESENSR 178
+ +D+ +F ++ D V R + S S + +++ R
Sbjct: 404 ----------SKIYSDK------EFAGSYNSSDDEVYSRPSSLVSSSPQRSTSSDADGER 447
Query: 179 DFH------ATESQTVLNV 191
F+ T +QT++ +
Sbjct: 448 QFNLNGNSVPTATQTLMTM 466
>gi|156231067 TBC1 domain family, member 8 [Homo sapiens]
Length = 1140
Score = 54.3 bits (129), Expect = 1e-07
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQKEILY---QGKLFVSENWICFHSKVFGKDTKI 59
+A F + F +P +E L C+L G++F S+++ICF S+ G KI
Sbjct: 281 RAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTTGRMFASDSYICFASREDGC-CKI 339
Query: 60 SIPAFSVTLIKKTKTALLVPNALIIATVTD-RYIFVSLLSRDSTYKLLKSVCGHLENTSV 118
+P V I+K + L+P+ +I++ + + F+ L RDS L++++ L+
Sbjct: 340 ILPLREVVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDS---LVEALLARLKQVHA 396
Query: 119 GNSPN-PSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDME--------------G 163
+ + +SA++ + S + + F DL+ + Q ++ E
Sbjct: 397 NHPVHYDTSADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKSPLMHPDALVTA 456
Query: 164 YSSSGSQTPESENSRD 179
+ SGSQ+P+S SR+
Sbjct: 457 FQQSGSQSPDSRMSRE 472
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 16 PTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISIPAFSVTLIKKTKT 74
P E L ++C K + QG L++S N +CF+S GK+ K+ +P + +++T
Sbjct: 154 PEAEKLVTYYSCCCWKGRVPRQGWLYLSINHLCFYSFFLGKELKLVVPWVDIQKLERTSN 213
Query: 75 ALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSV 109
L + + I T F L+ D +K+++ +
Sbjct: 214 VFLT-DTIRITTQNKERDFSMFLNLDEVFKVMEQL 247
>gi|45597177 TBC1 domain family, member 9B (with GRAM domain)
isoform b [Homo sapiens]
Length = 1233
Score = 47.4 bits (111), Expect = 2e-05
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISI 61
+A + K F +P E L ++C+ K + QG L+++ N +CF+S + GK+ + +
Sbjct: 139 EAELKMRKQF-GMPEGEKLVNYYSCSYWKGRVPRQGWLYLTVNHLCFYSFLLGKEVSLVV 197
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSV 109
+T ++K T LL P ++ + T F L+ T+KL++ +
Sbjct: 198 QWVDITRLEKNAT-LLFPESIRVDTRDQELFFSMFLNIGETFKLMEQL 244
Score = 46.6 bits (109), Expect = 3e-05
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQ---KEILYQGKLFVSENWICFHSKVFGKDTKI 59
+A ++ +P +E L +C L ++ G++F+S N+ICF SK +
Sbjct: 284 RAKNECYRATFRLPRDERLDGHTSCTLWTPFNKLHIPGQMFISNNYICFASKE-EDACHL 342
Query: 60 SIPAFSVTLIKKTKTALLVPNALIIATVTD-RYIFVSLLSRDSTYKLLKSVCGHLENT-- 116
IP VT+++K ++ ++P+ L I+T + ++F +L RD L++ + L+ T
Sbjct: 343 IIPLREVTIVEKADSSSVLPSPLSISTKSKMTFLFANLKDRDF---LVQRISDFLQKTPS 399
Query: 117 ----SVGN----------SPNPSSAENSFRADRPSSLPLDFNDEF------SDLDGVVQ- 155
S+G+ +P+ E S + P+S PL F + G+++
Sbjct: 400 KQPGSIGSRKASVVDPSTESSPAPQEGSEQPASPAS-PLSSRQSFCAQEAPTASQGLLKL 458
Query: 156 -QRRQDMEGYSSSGSQTPESENSRDFHATE 184
Q+ ME + G++ E S H E
Sbjct: 459 FQKNSPMEDLGAKGAKEKMKEESWHIHFFE 488
>gi|45597175 TBC1 domain family, member 9B (with GRAM domain)
isoform a [Homo sapiens]
Length = 1250
Score = 47.4 bits (111), Expect = 2e-05
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISI 61
+A + K F +P E L ++C+ K + QG L+++ N +CF+S + GK+ + +
Sbjct: 139 EAELKMRKQF-GMPEGEKLVNYYSCSYWKGRVPRQGWLYLTVNHLCFYSFLLGKEVSLVV 197
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSV 109
+T ++K T LL P ++ + T F L+ T+KL++ +
Sbjct: 198 QWVDITRLEKNAT-LLFPESIRVDTRDQELFFSMFLNIGETFKLMEQL 244
Score = 46.6 bits (109), Expect = 3e-05
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQ---KEILYQGKLFVSENWICFHSKVFGKDTKI 59
+A ++ +P +E L +C L ++ G++F+S N+ICF SK +
Sbjct: 284 RAKNECYRATFRLPRDERLDGHTSCTLWTPFNKLHIPGQMFISNNYICFASKE-EDACHL 342
Query: 60 SIPAFSVTLIKKTKTALLVPNALIIATVTD-RYIFVSLLSRDSTYKLLKSVCGHLENT-- 116
IP VT+++K ++ ++P+ L I+T + ++F +L RD L++ + L+ T
Sbjct: 343 IIPLREVTIVEKADSSSVLPSPLSISTKSKMTFLFANLKDRDF---LVQRISDFLQKTPS 399
Query: 117 ----SVGN----------SPNPSSAENSFRADRPSSLPLDFNDEF------SDLDGVVQ- 155
S+G+ +P+ E S + P+S PL F + G+++
Sbjct: 400 KQPGSIGSRKASVVDPSTESSPAPQEGSEQPASPAS-PLSSRQSFCAQEAPTASQGLLKL 458
Query: 156 -QRRQDMEGYSSSGSQTPESENSRDFHATE 184
Q+ ME + G++ E S H E
Sbjct: 459 FQKNSPMEDLGAKGAKEKMKEESWHIHFFE 488
>gi|38570103 TBC1 domain family, member 8B (with GRAM domain)
isoform b [Homo sapiens]
Length = 632
Score = 44.3 bits (103), Expect = 2e-04
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISI 61
+A + F K F +P +E L ++C+ K + QG L++S N++ F+S + G + K+ I
Sbjct: 142 EALLKFEKCF-GLPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSEIKLII 200
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGH 112
V+ ++KT +L ++ + + + + F L + TY L++ + +
Sbjct: 201 SWDEVSKLEKTSNVILT-ESIHVCSQGENHYFSMFLHINQTYLLMEQLANY 250
Score = 35.4 bits (80), Expect = 0.070
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQKEILY---QGKLFVSENWICFHSKVFGKDTKI 59
+A+ F +P E LK+ C L + GK+ +SEN+ICF S+ G +
Sbjct: 281 RAHSEQFNAFFRLPKGESLKEVHECFLWVPFSHFNTHGKMCISENYICFASQ-DGNQCSV 339
Query: 60 SIPAFSVTLIKKT 72
IP V I KT
Sbjct: 340 IIPLREVLAIDKT 352
>gi|38570101 TBC1 domain family, member 8B (with GRAM domain)
isoform a [Homo sapiens]
Length = 1120
Score = 44.3 bits (103), Expect = 2e-04
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQK-EILYQGKLFVSENWICFHSKVFGKDTKISI 61
+A + F K F +P +E L ++C+ K + QG L++S N++ F+S + G + K+ I
Sbjct: 142 EALLKFEKCF-GLPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSEIKLII 200
Query: 62 PAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGH 112
V+ ++KT +L ++ + + + + F L + TY L++ + +
Sbjct: 201 SWDEVSKLEKTSNVILT-ESIHVCSQGENHYFSMFLHINQTYLLMEQLANY 250
Score = 35.4 bits (80), Expect = 0.070
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 3 KANMHFHKLFLSVPTEEPLKQSFTCALQKEILY---QGKLFVSENWICFHSKVFGKDTKI 59
+A+ F +P E LK+ C L + GK+ +SEN+ICF S+ G +
Sbjct: 281 RAHSEQFNAFFRLPKGESLKEVHECFLWVPFSHFNTHGKMCISENYICFASQ-DGNQCSV 339
Query: 60 SIPAFSVTLIKKT 72
IP V I KT
Sbjct: 340 IIPLREVLAIDKT 352
>gi|67763814 death-inducing-protein [Homo sapiens]
Length = 578
Score = 37.7 bits (86), Expect = 0.014
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 7 HFHKLFLSVPTEEPL---KQSFTCAL-------QKEILYQGKLFVSENWICFHSKVFG-- 54
+FH++F E PL + + C L + + G L+V+EN++CF S G
Sbjct: 446 NFHEIFNLTENERPLAVCENGWRCCLINRDRKMPTDYIRNGVLYVTENYLCFESSKSGSS 505
Query: 55 KDTKISIPAFSVTLIKKTKTALLVPNA---LIIATVTDR--YIFVSLLSRDSTYKLLKS 108
K K+ I +T I+K K ++P + + ++T + + +F +++ RD ++ + S
Sbjct: 506 KRNKV-IKLVDITDIQKYKVLSVLPGSGMGIAVSTPSTQKPLVFGAMVHRDEAFETILS 563
>gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens]
Length = 910
Score = 32.7 bits (73), Expect = 0.45
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 50 SKVFGKDTKISIPAF--SVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSR----DSTY 103
S + G T+ ++ +F ++++I + + V N + ++ +SL S +ST
Sbjct: 312 SMIVGNATEAAVSSFVQNLSVIIRQNPSTTVGNLASVVSILSNISSLSLASHFRVSNSTM 371
Query: 104 KLLKSVCGHLENTSVGNSPNPSSAENSFRADR-------------PSSLPLDFNDEFSDL 150
+ + S+ ++ N++ + E + + R P++LPL+F+ +F D
Sbjct: 372 EDVISIADNILNSASVTNWTVLLREEKYASSRLLETLENISTLVPPTALPLNFSRKFIDW 431
Query: 151 DGVVQQRRQDMEGYSSSGSQTPES 174
G+ + Q GYS P++
Sbjct: 432 KGIPVNKSQLKRGYSYQIKMCPQN 455
>gi|39995071 exonuclease 1 isoform b [Homo sapiens]
Length = 846
Score = 31.6 bits (70), Expect = 1.0
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 111 GHLENTSVGNSPNPSSAENSFR--ADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYS-SS 167
G L + S SP+PS+A FR +D P+SLP + SD+ + + D E +
Sbjct: 613 GGLGDFSRTPSPSPSTALQQFRRKSDSPTSLP---ENNMSDVSQLKSEESSDDESHPLRE 669
Query: 168 GSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
G+ + +S+ S +F + +S +S+ +K + ++
Sbjct: 670 GACSSQSQESGEF-SLQSSNASKLSQCSSKDSDSE 703
>gi|39995069 exonuclease 1 isoform a [Homo sapiens]
Length = 803
Score = 31.6 bits (70), Expect = 1.0
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 111 GHLENTSVGNSPNPSSAENSFR--ADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYS-SS 167
G L + S SP+PS+A FR +D P+SLP + SD+ + + D E +
Sbjct: 613 GGLGDFSRTPSPSPSTALQQFRRKSDSPTSLP---ENNMSDVSQLKSEESSDDESHPLRE 669
Query: 168 GSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
G+ + +S+ S +F + +S +S+ +K + ++
Sbjct: 670 GACSSQSQESGEF-SLQSSNASKLSQCSSKDSDSE 703
>gi|18491016 exonuclease 1 isoform b [Homo sapiens]
Length = 846
Score = 31.6 bits (70), Expect = 1.0
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 111 GHLENTSVGNSPNPSSAENSFR--ADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYS-SS 167
G L + S SP+PS+A FR +D P+SLP + SD+ + + D E +
Sbjct: 613 GGLGDFSRTPSPSPSTALQQFRRKSDSPTSLP---ENNMSDVSQLKSEESSDDESHPLRE 669
Query: 168 GSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
G+ + +S+ S +F + +S +S+ +K + ++
Sbjct: 670 GACSSQSQESGEF-SLQSSNASKLSQCSSKDSDSE 703
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 30.8 bits (68), Expect = 1.7
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 109 VCGHLENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSG 168
+C ++NTS +S P E S +SLP+ F D + LD V +D++
Sbjct: 375 MCTAIKNTSFCSSLPPLPIECSELDGDLNSLPIIFEDRY--LDSVT----EDLDAPWMGI 428
Query: 169 SQTPESENSR-DFHATESQTVLNVSKGEAKPTRADAHVNRVPEGK 212
SE+S+ D + TE +V +S E K A A EG+
Sbjct: 429 QNLQRSESSKMDKYETEESSVAGLSSPELKVRPAGASSIWYTEGE 473
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 113 LENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTP 172
+E+ + S + ++ S+L DF DE +G+ + +++ G S +
Sbjct: 1657 VEDMEIETSEVKKVTSSPITSEEESNLSNDFIDE----NGLPINKNENVNGESKRKTVIT 1712
Query: 173 ESENSRDFHATESQTVLNVSKGE 195
E ATES+TV+ V KG+
Sbjct: 1713 EVTTMTSTVATESKTVIKVEKGD 1735
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 113 LENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTP 172
+E+ + S + ++ S+L DF DE +G+ + +++ G S +
Sbjct: 1531 VEDMEIETSEVKKVTSSPITSEEESNLSNDFIDE----NGLPINKNENVNGESKRKTVIT 1586
Query: 173 ESENSRDFHATESQTVLNVSKGE 195
E ATES+TV+ V KG+
Sbjct: 1587 EVTTMTSTVATESKTVIKVEKGD 1609
>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
Length = 787
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 81 ALIIATVTDRYIFVSLLSRDST-----YKLLKSVCGHLENTSVGNSPNPSSAENSFRADR 135
AL+I + + + + L ST KL+K LEN +G S E+ ++D+
Sbjct: 527 ALMIDILEEFSVLSTALQSRSTNIKKAQKLIKRTIRALENLKIGTGKYESQIEDLIKSDK 586
Query: 136 PSSLPLDFNDEFSDL 150
+P + N++F+ L
Sbjct: 587 FKDIPFNKNNKFNAL 601
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 30.8 bits (68), Expect = 1.7
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 145 DEFSDLDGVVQQRRQDMEGYS--SSGSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
DE + D V++R + G SS PE+E R+ + + + ++ KP + +
Sbjct: 372 DELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKE 431
Query: 203 AHVNRVPEGKAKSLPV-----QGLSETVGILHKVKSQKCPMLHHIL-IFYAIVVCALIIS 256
V PE K ++ PV + SE + KV+ +K P + L ++ + AL +
Sbjct: 432 KRVR--PEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVD 489
Query: 257 TFYMRYRINTLEEQLGLL--TSIVDTHNTEQAA 287
+ ++ +N LEE LG L TS + NT+ A
Sbjct: 490 SPDVKRCLNALEE-LGTLQVTSQILQKNTDVVA 521
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 30.8 bits (68), Expect = 1.7
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 145 DEFSDLDGVVQQRRQDMEGYS--SSGSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
DE + D V++R + G SS PE+E R+ + + + ++ KP + +
Sbjct: 372 DELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKE 431
Query: 203 AHVNRVPEGKAKSLPV-----QGLSETVGILHKVKSQKCPMLHHIL-IFYAIVVCALIIS 256
V PE K ++ PV + SE + KV+ +K P + L ++ + AL +
Sbjct: 432 KRVR--PEEKQQAKPVKVERTRKRSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVD 489
Query: 257 TFYMRYRINTLEEQLGLL--TSIVDTHNTEQAA 287
+ ++ +N LEE LG L TS + NT+ A
Sbjct: 490 SPDVKRCLNALEE-LGTLQVTSQILQKNTDVVA 521
>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
Length = 1302
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 109 VCGHLENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQR---RQDMEGYS 165
+C ++NTS +S P E S +SLP+ F D + LD V + + QD +
Sbjct: 358 MCTAIKNTSFCSSLPPLPIECSELDGDLNSLPIIFEDRY--LDSVTEGKLDISQDDSEIT 415
Query: 166 SSGSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
+S D H ++ L V E KP+ D
Sbjct: 416 QMEHNLASRRSSDDCHDHQTTPSLGVRTIEIKPSNKD 452
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 109 VCGHLENTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQR---RQDMEGYS 165
+C ++NTS +S P E S +SLP+ F D + LD V + + QD +
Sbjct: 375 MCTAIKNTSFCSSLPPLPIECSELDGDLNSLPIIFEDRY--LDSVTEGKLDISQDDSEIT 432
Query: 166 SSGSQTPESENSRDFHATESQTVLNVSKGEAKPTRAD 202
+S D H ++ L V E KP+ D
Sbjct: 433 QMEHNLASRRSSDDCHDHQTTPSLGVRTIEIKPSNKD 469
>gi|20336473 B-cell CLL/lymphoma 7B [Homo sapiens]
Length = 202
Score = 30.4 bits (67), Expect = 2.3
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 115 NTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGV--VQQRRQDMEGYSSSGSQTP 172
N+S PN ++ A SSL L+F DE S+ V V Q + D SS Q
Sbjct: 63 NSSAAREPNGFPSD----ASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQS 118
Query: 173 ES---ENSRDFHATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPV 218
ES ++ DF +SQ + +P+ + V P K PV
Sbjct: 119 ESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPV 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,659,272
Number of Sequences: 37866
Number of extensions: 485025
Number of successful extensions: 1589
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1560
Number of HSP's gapped (non-prelim): 61
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.