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Search of human proteins with 226423891
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226423891 myocardin isoform 3 [Homo sapiens]
(684 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226423891 myocardin isoform 3 [Homo sapiens] 1376 0.0
gi|226423889 myocardin isoform 1 [Homo sapiens] 1370 0.0
gi|23957692 myocardin isoform 2 [Homo sapiens] 1236 0.0
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 340 2e-93
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 324 2e-88
gi|195963410 MEF2 activating motif and SAP domain containing tra... 63 8e-10
gi|32698970 MEF2 activating motif and SAP domain containing tran... 57 7e-08
gi|50345997 E1A binding protein p300 [Homo sapiens] 50 7e-06
gi|226437579 NAC alpha domain containing [Homo sapiens] 48 3e-05
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 48 3e-05
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 48 3e-05
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 48 3e-05
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 48 3e-05
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 47 6e-05
gi|148368962 NKF3 kinase family member [Homo sapiens] 46 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 45 2e-04
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 45 3e-04
gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] 44 4e-04
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 44 5e-04
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 44 6e-04
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 44 6e-04
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 44 6e-04
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 44 6e-04
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 43 8e-04
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 43 8e-04
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 43 8e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 43 8e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 43 8e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 43 8e-04
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 43 8e-04
>gi|226423891 myocardin isoform 3 [Homo sapiens]
Length = 684
Score = 1376 bits (3561), Expect = 0.0
Identities = 684/684 (100%), Positives = 684/684 (100%)
Query: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED
Sbjct: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
Query: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 120
SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH
Sbjct: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 120
Query: 121 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 180
QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE
Sbjct: 121 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 180
Query: 181 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 240
KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS
Sbjct: 181 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 240
Query: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 300
SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA
Sbjct: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 300
Query: 301 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 360
LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP
Sbjct: 301 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 360
Query: 361 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 420
PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE
Sbjct: 361 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 420
Query: 421 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 480
KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV
Sbjct: 421 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 480
Query: 481 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 540
SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ
Sbjct: 481 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 540
Query: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 600
HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP
Sbjct: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 600
Query: 601 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 660
SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS
Sbjct: 601 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 660
Query: 661 KSSSAISEVTQPPSYEDAVKQVTM 684
KSSSAISEVTQPPSYEDAVKQVTM
Sbjct: 661 KSSSAISEVTQPPSYEDAVKQVTM 684
>gi|226423889 myocardin isoform 1 [Homo sapiens]
Length = 986
Score = 1370 bits (3547), Expect = 0.0
Identities = 681/681 (100%), Positives = 681/681 (100%)
Query: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED
Sbjct: 97 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 156
Query: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 120
SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH
Sbjct: 157 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 216
Query: 121 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 180
QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE
Sbjct: 217 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 276
Query: 181 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 240
KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS
Sbjct: 277 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 336
Query: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 300
SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA
Sbjct: 337 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 396
Query: 301 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 360
LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP
Sbjct: 397 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 456
Query: 361 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 420
PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE
Sbjct: 457 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 516
Query: 421 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 480
KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV
Sbjct: 517 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 576
Query: 481 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 540
SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ
Sbjct: 577 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 636
Query: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 600
HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP
Sbjct: 637 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 696
Query: 601 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 660
SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS
Sbjct: 697 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 756
Query: 661 KSSSAISEVTQPPSYEDAVKQ 681
KSSSAISEVTQPPSYEDAVKQ
Sbjct: 757 KSSSAISEVTQPPSYEDAVKQ 777
>gi|23957692 myocardin isoform 2 [Homo sapiens]
Length = 938
Score = 1236 bits (3198), Expect = 0.0
Identities = 630/681 (92%), Positives = 631/681 (92%), Gaps = 48/681 (7%)
Query: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED
Sbjct: 97 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 156
Query: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 120
SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH
Sbjct: 157 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 216
Query: 121 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 180
QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE
Sbjct: 217 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 276
Query: 181 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 240
KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS
Sbjct: 277 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 336
Query: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 300
SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA
Sbjct: 337 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 396
Query: 301 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 360
LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP
Sbjct: 397 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 456
Query: 361 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 420
PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE
Sbjct: 457 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 516
Query: 421 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 480
KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV
Sbjct: 517 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 576
Query: 481 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 540
SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ
Sbjct: 577 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 636
Query: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 600
HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQ +G H
Sbjct: 637 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLH----- 691
Query: 601 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 660
SSDKVGPKFSIPSPTFS
Sbjct: 692 -------------------------------------------SSDKVGPKFSIPSPTFS 708
Query: 661 KSSSAISEVTQPPSYEDAVKQ 681
KSSSAISEVTQPPSYEDAVKQ
Sbjct: 709 KSSSAISEVTQPPSYEDAVKQ 729
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 340 bits (873), Expect = 2e-93
Identities = 276/756 (36%), Positives = 383/756 (50%), Gaps = 119/756 (15%)
Query: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKG-NQVSFSKSTDAFAFEE 59
MKLKRARLADDLNEKIA RPGP+ELVEKNILPVDS+VKEAI G + + + F+F+E
Sbjct: 130 MKLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDE 189
Query: 60 DSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPS 119
DSS D LSPDQ S++ Q SA SP + K S++PS + T AS S + P+
Sbjct: 190 DSS-DALSPDQPASQESQGSAASPSEPKVSESPSPVTTNTPAQFASVSPTVPEFLKTPPT 248
Query: 120 HQSDAGKQGLGPPSTPIAVHAAVKSKSLG------------DSKNRHKKPKDPKPKVKKL 167
+ P+ P+ V S G + K+R KK KDPKP+VKKL
Sbjct: 249 ADQPPPR-----PAAPVLPTNTVSSAKPGPALVKQSHPKNPNDKHRSKKCKDPKPRVKKL 303
Query: 168 KYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQL 227
KYHQYIPPDQK EK+ P MDS YARLLQQQQLFLQLQILSQQ+Q ++Y + A
Sbjct: 304 KYHQYIPPDQKGEKNEPQMDSNYARLLQQQQLFLQLQILSQQKQ----HYNYQTILPAPF 359
Query: 228 KEPNEQMVRNPNSSSTPLSN-TPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQ 286
K N+ +N NS ++ L+N TP +P +N T KPGPLP +LDDLKVSEL+ +
Sbjct: 360 KPLND---KNSNSGNSALNNATPNTPRQN-----TSTPVRKPGPLPSSLDDLKVSELKTE 411
Query: 287 LRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI-------------TTVTFPVTPNT 333
L++RGLPVSGTK L++RL+P+Q+ + + + G + TV PVT T
Sbjct: 412 LKLRGLPVSGTKPDLIERLKPYQEVNSSGLAAGGIVAVSSSAIVTSNPEVTVALPVT--T 469
Query: 334 LPNYQSSSSTSALSNGFYHFGSTSS-------SP-PISPASSDLSVAG----SLPDTFND 381
L N +SS S L G++++ SP PISP+ S+ S ++ DTF +
Sbjct: 470 LHN-TVTSSVSTLKAELPPTGTSNATRVENVHSPLPISPSPSEQSSLSTDDTNMADTFTE 528
Query: 382 ----ASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTW 437
SPS L SP+ + E +S + ELD +EKD+ L EK+K I EL
Sbjct: 529 IMTMMSPSQFLSSSPLRMTNNEDSLSPTSSTLSNLELDA--AEKDRKLQEKEKQIEELKR 586
Query: 438 KLQQEQRQVEELRMQLQKQKRNNCSEKKPLP-----------------FLAASIKQEEAV 480
KL+QEQ+ VE L+MQL+ +KR +++PL L +SIK E ++
Sbjct: 587 KLEQEQKLVEVLKMQLEVEKRG--QQQRPLEAQPSAPGHSVKSDQKHGSLGSSIKDEASL 644
Query: 481 SSCPFASQ-VPVKRQSSSSECHPPACEAAQLQPLGNAHCVE------SSDQTNVLSSTFL 533
C + Q +PV +S P Q A ++ ++Q +V+S +
Sbjct: 645 PDCSSSRQPIPV----ASHAVGQPVSTGGQTLVAKKAVVIKQEVPVGQAEQQSVVSQFYT 700
Query: 534 SPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQG--EGHRVSSPISSQVCTAQN 591
SPQ Q P A + +P + P+ Q H +S P + +
Sbjct: 701 SPQAGMQTQPQIATAA----QIPTAALASGLAPTVPQTQDTFPQHVLSQPQQVRKVFTNS 756
Query: 592 SGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPK 651
+ ++ P P + ++ PF ++S + P P L + K
Sbjct: 757 ASSNTVLPYQRHP-APAVQQPFINKASNSVLQSRNAPLP----------SLQNGPNTPNK 805
Query: 652 FSIPSP------TFSKSSSAISEVTQPPSYEDAVKQ 681
S P P S S +++ PP YE+A+KQ
Sbjct: 806 PSSPPPPQQFVVQHSLFGSPVAKTKDPPRYEEAIKQ 841
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 324 bits (830), Expect = 2e-88
Identities = 268/740 (36%), Positives = 363/740 (49%), Gaps = 123/740 (16%)
Query: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
+KLKRARLADDLNEKIA RPGP+ELVEKNILPV+S++KEAI QV++ K D+ +F+ED
Sbjct: 59 LKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNYPKVADSSSFDED 118
Query: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQ-PS 119
SS D LSP+Q S + Q S SP +A+ S+ + + + + S R+ +
Sbjct: 119 SS-DALSPEQPASHESQGSVPSPLEARVSEPLLSATSASPTQVVSQLPMGRDSREMLFLA 177
Query: 120 HQSDAGKQGLGPPS------------TPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKL 167
Q L PPS TP + + + KS + R KK K+ KPKVKKL
Sbjct: 178 EQPPLPPPPLLPPSLTNGTTIPTAKSTPTLIKQS-QPKSASEKSQRSKKAKELKPKVKKL 236
Query: 168 KYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQL 227
KYHQYIPPDQK ++ PPMDS+YA++LQQQQLFLQLQIL+QQQQQ + +QA L
Sbjct: 237 KYHQYIPPDQKQDRGAPPMDSSYAKILQQQQLFLQLQILNQQQQQHHN-------YQAIL 289
Query: 228 KEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSF----------KPGPLPPNLDD 277
P + SS TP + + +S SG G KPG LP NLDD
Sbjct: 290 PAPPKSAGEALGSSGTPPVRSLSTTNSSSSSGAPGPCGLARQNSTSLTGKPGALPANLDD 349
Query: 278 LKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVP-------------NFGDITT 324
+KV+EL+Q+L++R LPVSGTKT L++RLR +QD +PVP G++
Sbjct: 350 MKVAELKQELKLRSLPVSGTKTELIERLRAYQD-QISPVPGAPKAPAATSILHKAGEV-V 407
Query: 325 VTFPVTP-NTLPNYQSSSSTSA-------LSNGFYHFGSTSSSPPISPASSDLSV----- 371
V FP +T P ++ A S+G FGST S+PP+SP S+ S+
Sbjct: 408 VAFPAARLSTGPALVAAGLAPAEVVVATVASSGVVKFGSTGSTPPVSPTPSERSLLSTGD 467
Query: 372 AGSLP-DTFND--ASP--SFGLHPSPVHVCTEES---LMSSLNGGSVPSELDGLDSEKDK 423
S P DTF + SP L SP+ + +E S +EL+G D KD+
Sbjct: 468 ENSTPGDTFGEMVTSPLTQLTLQASPLQILVKEEGPRAGSCCLSPGGRAELEGRD--KDQ 525
Query: 424 MLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSC 483
ML EK K I LT L+Q+Q+ VE L++QL+++KR P P L +KQE + SSC
Sbjct: 526 MLQEKDKQIEALTRMLRQKQQLVERLKLQLEQEKRAQQPAPAPAP-LGTPVKQENSFSSC 584
Query: 484 PFASQVPVKRQSSSSECHP--PACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQH 541
SQ P+ HP P+ A + + V + V+ L P+ P
Sbjct: 585 QL-SQQPL------GPAHPFNPSLAAPATNHI-DPCAVAPGPPSVVVKQEALQPEPEPVP 636
Query: 542 SPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPS 601
+P + PQ SL P + S+G + V T N A S
Sbjct: 637 AP-QLLLGPQGPSLIKGVAPPTLITDSTG------------THLVLTVTNKNADSPGLSS 683
Query: 602 FSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFSK 661
SP S P G+P P +P Q + + P F P+ K
Sbjct: 684 GSPQQPSSQP--------------GSPAP-APSAQMDL-----EHPLQPLFGTPTSLLKK 723
Query: 662 SSSAISEVTQPPSYEDAVKQ 681
+PP YE+A+ Q
Sbjct: 724 ---------EPPGYEEAMSQ 734
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 63.2 bits (152), Expect = 8e-10
Identities = 71/275 (25%), Positives = 99/275 (36%), Gaps = 75/275 (27%)
Query: 155 KKPKDPKPKVKK----------LKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 204
+ PK PK+ + L YHQY+PP+ + P
Sbjct: 76 RSPKKESPKISQRWRESKPRGNLTYHQYMPPEPRQGSRADP------------------- 116
Query: 205 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 264
Q S LG L E + +P +PL TP P GV
Sbjct: 117 ---------QAEGSALGPPGPSLWEGTDSQQPHPRMKPSPL--TPCPP---------GV- 155
Query: 265 SFKPGPLPP---------NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNP 315
P P PP L++L VSELRQQLR+RGLPVSGTK+ L++R+R P
Sbjct: 156 ---PSPSPPPHKLELQTLKLEELTVSELRQQLRLRGLPVSGTKSMLLERMRGGAPPRERP 212
Query: 316 VPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPI-----SPASSDLS 370
P D P + + +A G + S PP+ +P ++
Sbjct: 213 KPRREDSPAGA------PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAP 266
Query: 371 VAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSL 405
P +PS G P + EE L ++
Sbjct: 267 TPTPAPAAAPALTPSSG--PGSAALTLEEELQEAI 299
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 56.6 bits (135), Expect = 7e-08
Identities = 58/202 (28%), Positives = 80/202 (39%), Gaps = 37/202 (18%)
Query: 218 SYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPP---- 273
S LG L E + +P +PL TP P GV P P PP
Sbjct: 18 SALGPPGPSLWEGTDSQQPHPRMKPSPL--TPCPP---------GV----PSPSPPPHKL 62
Query: 274 -----NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFP 328
L++L VSELRQQLR+RGLPVSGTK+ L++R+R P P D
Sbjct: 63 ELQTLKLEELTVSELRQQLRLRGLPVSGTKSMLLERMRGGAPPRERPKPRREDSPAGA-- 120
Query: 329 VTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPI-----SPASSDLSVAGSLPDTFNDAS 383
P + + +A G + S PP+ +P ++ P +
Sbjct: 121 ----PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALT 176
Query: 384 PSFGLHPSPVHVCTEESLMSSL 405
PS G P + EE L ++
Sbjct: 177 PSSG--PGSAALTLEEELQEAI 196
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 50.1 bits (118), Expect = 7e-06
Identities = 119/606 (19%), Positives = 224/606 (36%), Gaps = 89/606 (14%)
Query: 35 SAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAG-SPPDAKASDTPS 93
S + + G Q T A ++ G P ++ P + +PP++ P
Sbjct: 1834 SMQRTGVVGQQQGLPSPTPA----TPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPR 1889
Query: 94 TGSLG-TNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKN 152
T + G +Q A+G + P+ A GPP P AV A++ + +++
Sbjct: 1890 TQAAGPVSQGKAAGQ-------VTPPTPPQTAQPPLPGPP--PAAVEMAMQIQRAAETQR 1940
Query: 153 RHKKPKDPKPKVKKLKYHQYIP--PDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQ 210
+ + + ++ HQ P P +PPPM + L+ +
Sbjct: 1941 QMAHVQIFQRPIQ----HQMPPMTPMAPMGMNPPPMTRGPSGHLEPG--------MGPTG 1988
Query: 211 QQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGP 270
QQQ +S G+ Q Q + + P S PL+ GQ G+S KPG
Sbjct: 1989 MQQQPPWSQGGLPQPQQLQSG---MPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGT 2045
Query: 271 LPPN-LDDL------KVSELRQQLRIRGLPVSGTKTA--LMDRLRPFQDCSGNPVPNFGD 321
+ L +L S L+QQ + L + A + R + + + P+P
Sbjct: 2046 VSQQALQNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIPGQPG 2105
Query: 322 ITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFND 381
+ + P T+P Q S A+ N ++P + + AG LP
Sbjct: 2106 MPQGQPGLQPPTMPGQQGVHSNPAMQN-------------MNPMQAGVQRAG-LP----Q 2147
Query: 382 ASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQK---------VI 432
P L P P+ + ++ ++N ++PS+ + + M ++Q+ +
Sbjct: 2148 QQPQQQLQP-PMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMA 2206
Query: 433 NELTWKLQQ----EQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQ 488
N ++ Q +Q + ++ +Q+ ++ N + LP ++ E S + +
Sbjct: 2207 NHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLP---QALGAEAGASLQAYQQR 2263
Query: 489 VPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSP----- 543
+ ++ S + +P + + L + ++ N LS+ SPQ P P
Sbjct: 2264 LLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPP 2323
Query: 544 -------LGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVC-TAQNSGAH 595
+ SP H+S S +P + + + +GH S +S + A N G
Sbjct: 2324 HSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQGHFASPDQNSMLSQLASNPGMA 2383
Query: 596 DGHPPS 601
+ H S
Sbjct: 2384 NLHGAS 2389
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 455 KQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP-PACEAAQLQP- 512
+++R + P P L +++ E ++ SCP +S V P P QP
Sbjct: 1124 REERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPE 1183
Query: 513 --LGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSG 570
LG + + +VL + L P P++ G +P L P P+ P L +G
Sbjct: 1184 PVLGLGSVEQPHEVPSVLGTPLLQP---PENLAKGQPSTPVDRPLGPDPSAPGTL---AG 1237
Query: 571 AQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQ------ADSSHGA 624
A +P Q Q D PP S L PP +G Q + ++
Sbjct: 1238 AALPPLEPPAPCLCQ--DPQEDSVEDEEPPG----SLGLPPPQAGVQPAAAAVSGTTQPL 1291
Query: 625 GGNP----CPKSPCVQQKMAGLHSSD---KVGPKFSIPSPTFSKSSSAISEVTQPPSYED 677
G P P SP + K+A + + D ++ P +P P+ +S + ++ P ED
Sbjct: 1292 GTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGLSAPEQQED 1351
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 455 KQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP-PACEAAQLQP- 512
+++R + P P L +++ E ++ SCP +S V P P QP
Sbjct: 1084 REERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPE 1143
Query: 513 --LGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSG 570
LG + + +VL + L P P++ G +P L P P+ P L +G
Sbjct: 1144 PVLGLGSVEQPHEVPSVLGTPLLQP---PENLAKGQPSTPVDRPLGPDPSAPGTL---AG 1197
Query: 571 AQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQ------ADSSHGA 624
A +P Q Q D PP S L PP +G Q + ++
Sbjct: 1198 AALPPLEPPAPCLCQ--DPQEDSVEDEEPPG----SLGLPPPQAGVQPAAAAVSGTTQPL 1251
Query: 625 GGNP----CPKSPCVQQKMAGLHSSD---KVGPKFSIPSPTFSKSSSAISEVTQPPSYED 677
G P P SP + K+A + + D ++ P +P P+ +S + ++ P ED
Sbjct: 1252 GTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGLSAPEQQED 1311
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 455 KQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP-PACEAAQLQP- 512
+++R + P P L +++ E ++ SCP +S V P P QP
Sbjct: 1084 REERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPE 1143
Query: 513 --LGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSG 570
LG + + +VL + L P P++ G +P L P P+ P L +G
Sbjct: 1144 PVLGLGSVEQPHEVPSVLGTPLLQP---PENLAKGQPSTPVDRPLGPDPSAPGTL---AG 1197
Query: 571 AQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQ------ADSSHGA 624
A +P Q Q D PP S L PP +G Q + ++
Sbjct: 1198 AALPPLEPPAPCLCQ--DPQEDSVEDEEPPG----SLGLPPPQAGVQPAAAAVSGTTQPL 1251
Query: 625 GGNP----CPKSPCVQQKMAGLHSSD---KVGPKFSIPSPTFSKSSSAISEVTQPPSYED 677
G P P SP + K+A + + D ++ P +P P+ +S + ++ P ED
Sbjct: 1252 GTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGLSAPEQQED 1311
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 455 KQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP-PACEAAQLQP- 512
+++R + P P L +++ E ++ SCP +S V P P QP
Sbjct: 1124 REERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPE 1183
Query: 513 --LGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSG 570
LG + + +VL + L P P++ G +P L P P+ P L +G
Sbjct: 1184 PVLGLGSVEQPHEVPSVLGTPLLQP---PENLAKGQPSTPVDRPLGPDPSAPGTL---AG 1237
Query: 571 AQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQ------ADSSHGA 624
A +P Q Q D PP S L PP +G Q + ++
Sbjct: 1238 AALPPLEPPAPCLCQ--DPQEDSVEDEEPPG----SLGLPPPQAGVQPAAAAVSGTTQPL 1291
Query: 625 GGNP----CPKSPCVQQKMAGLHSSD---KVGPKFSIPSPTFSKSSSAISEVTQPPSYED 677
G P P SP + K+A + + D ++ P +P P+ +S + ++ P ED
Sbjct: 1292 GTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGLSAPEQQED 1351
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 48.1 bits (113), Expect = 3e-05
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 455 KQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP-PACEAAQLQP- 512
+++R + P P L +++ E ++ SCP +S V P P QP
Sbjct: 1084 REERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPE 1143
Query: 513 --LGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSG 570
LG + + +VL + L P P++ G +P L P P+ P L +G
Sbjct: 1144 PVLGLGSVEQPHEVPSVLGTPLLQP---PENLAKGQPSTPVDRPLGPDPSAPGTL---AG 1197
Query: 571 AQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQ------ADSSHGA 624
A +P Q Q D PP S L PP +G Q + ++
Sbjct: 1198 AALPPLEPPAPCLCQ--DPQEDSVEDEEPPG----SLGLPPPQAGVQPAAAAVSGTTQPL 1251
Query: 625 GGNP----CPKSPCVQQKMAGLHSSD---KVGPKFSIPSPTFSKSSSAISEVTQPPSYED 677
G P P SP + K+A + + D ++ P +P P+ +S + ++ P ED
Sbjct: 1252 GTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPPSGPQSPAGPQGLSAPEQQED 1311
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 47.0 bits (110), Expect = 6e-05
Identities = 76/336 (22%), Positives = 118/336 (35%), Gaps = 58/336 (17%)
Query: 93 STGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPST-PIAVHAAVKSKSLGDS- 150
S G G N + N +P + +Q L P T P + A + G+
Sbjct: 896 SAGHFGVNNK--QNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQG 953
Query: 151 -----------KNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPM---DSAYARLLQQ 196
+ ++ P P V++ Q +PP +PPP +L QQ
Sbjct: 954 INLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQ-MPPQLMQHVAPPPQPPQQQPQPQLPQQ 1012
Query: 197 QQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLS-NTPLSPVKN 255
QQ Q SQQQQQQQ + + M Q K + +N + PL+ ++ P++
Sbjct: 1013 QQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQ 1072
Query: 256 SFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNP 315
S S VS P +PP+ D ++ +PV+ T R +Q+ NP
Sbjct: 1073 SGSVPVMVSLQGPASVPPSPDKQRMP----------MPVN-TPLGSNSRKMVYQESPQNP 1121
Query: 316 ----------VPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNG--------FYHFGSTS 357
+P + P PN +P++ + G G+T
Sbjct: 1122 SSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATP 1181
Query: 358 SSPPISPASSD---------LSVAGSLPDTFNDASP 384
PP++ S S P T N ASP
Sbjct: 1182 QQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASP 1217
Score = 35.8 bits (81), Expect = 0.13
Identities = 64/299 (21%), Positives = 109/299 (36%), Gaps = 35/299 (11%)
Query: 355 STSSSPPISPASSDLSVAGSLPD----TFNDASPSFGLHP--SPVHVCTEESLMSSLNGG 408
+T PP SS + G P+ T AS S + P S +H+ + SL
Sbjct: 180 ATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPP 239
Query: 409 SVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLP 468
P + ++ + + +L + QQ+Q+Q ++ + Q Q+Q++ + P
Sbjct: 240 HHPMQPVSVNRQMNPANFP------QLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQ 293
Query: 469 FLAASIKQEEAVSSCPFASQVPVK---RQSSSSECHPPACEAA----------QLQPLGN 515
+ + P +QVPV Q S PP + + + PL
Sbjct: 294 HQQQQPQGIRPQFTAP--TQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPG 351
Query: 516 AHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQ-HISLPPSPNNPHF-LPSSSGAQG 573
++ Q +T +P P P G+ ++ Q H + P N F P QG
Sbjct: 352 P--MQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQG 409
Query: 574 EGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQAD-SSHGAGGNPCPK 631
RV +P+ T ++ + P SF S + P + Q NP P+
Sbjct: 410 GPSRVPTPLQQPHLTNKSPAS---SPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQ 465
Score = 33.9 bits (76), Expect = 0.51
Identities = 59/239 (24%), Positives = 76/239 (31%), Gaps = 38/239 (15%)
Query: 169 YHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLK 228
+H P + +P + QQQQ Q Q QQQQQQQ + HQ Q
Sbjct: 240 HHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQP 299
Query: 229 E-------PNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVS 281
+ Q+ P + P P + S T +K PLP
Sbjct: 300 QGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLP--------G 351
Query: 282 ELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVP-NFGDITT----VTFPVTPN---- 332
++QQL+ R L Q S P P FG FP N
Sbjct: 352 PMQQQLQAR------------PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQF 399
Query: 333 TLPNYQS-SSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHP 390
T P +S S + T+ SP SP+S S P T N G P
Sbjct: 400 TAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSP-TVNQTQQQMGPRP 457
Score = 32.3 bits (72), Expect = 1.5
Identities = 38/165 (23%), Positives = 56/165 (33%), Gaps = 27/165 (16%)
Query: 131 PPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKK---------LKYHQYIPPDQKAEK 181
P + I V S + N +P+ P+P + L Q P
Sbjct: 179 PATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAP 238
Query: 182 SPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSS 241
PM F QLQ QQQQQQQ + Q Q ++ +Q+ P
Sbjct: 239 PHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQ-----QQQQQQQQQQQQLQARP--- 290
Query: 242 STPLSNTPLSP--VKNSFSGQTGVSSFKPGPLPPNLDDLKVSELR 284
P + P ++ F+ T V P+PP + L L+
Sbjct: 291 --PQQHQQQQPQGIRPQFTAPTQV------PVPPGWNQLPSGALQ 327
Score = 30.8 bits (68), Expect = 4.3
Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 38/245 (15%)
Query: 384 PSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQ 443
PS L PSP + + ++S G + + + + + ++L+++ +I ++ Q
Sbjct: 666 PSQNLGPSPQRMTPPKQMLSQ-QGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGN 724
Query: 444 RQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPP 503
+Q + Q + P P + ++ Q F Q+ S + P
Sbjct: 725 KQQFNTQNQSNVMPGPAQIMRGPTPNMQGNMVQ--------FTGQM-------SGQMLP- 768
Query: 504 ACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPH 563
Q P+ N+ Q VL SP + QH A + +SL
Sbjct: 769 -----QQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGD-PATTANNDVSLS------Q 816
Query: 564 FLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHG 623
+P S Q ++ + V Q + A H FS H S + PFSGA +
Sbjct: 817 MMPDVSIQQ------TNMVPPHVQAMQGNSASGNH---FSGHGMSFNAPFSGAPNGNQMS 867
Query: 624 AGGNP 628
G NP
Sbjct: 868 CGQNP 872
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 46.2 bits (108), Expect = 1e-04
Identities = 121/581 (20%), Positives = 213/581 (36%), Gaps = 98/581 (16%)
Query: 34 DSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPPDAK-ASDTP 92
D + E + G + + S + + SSD SPD + +E+ ++ S K +
Sbjct: 310 DDSYDEILNGYEENSVVSYGQGSIQSMVSSDSTSPDSSLTEESRSETASSLSQKICNGGL 369
Query: 93 STGSLGTNQDLASGSENDRNDSA-SQPSHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSK 151
S G+ G ++D+ N + S+ +Q S A K + P T H AV + L
Sbjct: 370 SPGNPGDSKDMKEIEPNYESPSSNNQDKDSSQASKSSIKVPET----HKAVLALRL---- 421
Query: 152 NRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQ 211
+ KD K V+ K D + + L+ ++ ++++ +Q
Sbjct: 422 ----EEKDGKIAVQTEKEESKASTDVAGQ-------AVTINLVPTEEQAKPYRVVNLEQP 470
Query: 212 QQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPL 271
+ ++ + + A E E V +P + S+ S+TP SPV + SS PG +
Sbjct: 471 LCK-PYTVVDVSAAMASEHLEGPVNSPKTKSS--SSTPNSPVTS--------SSLTPGQI 519
Query: 272 PPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTP 331
+ K S +R Q S +P + +T P
Sbjct: 520 SAHFQ--KSSAIRYQ--------------------EVWTSSTSPRQKIPKVELITSGTGP 557
Query: 332 NTLP--NYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLH 389
N P N S+ TS + S+ + P SP S++ +++N+A G+
Sbjct: 558 NVPPRKNCHKSAPTSPTATNI----SSKTIPVKSPNLSEIKF-----NSYNNA----GMP 604
Query: 390 PSPVHVCTEES-LMSSLNGGSV-----PSELDGLDSEKDKMLVEKQKVINELTWKL---Q 440
P P+ + E + SS N V P+ D L K + + + E T +
Sbjct: 605 PFPIIIHDEPTYARSSKNAIKVPIVINPNAYDNLAIYKSFLGTSGELSVKEKTTSVISHT 664
Query: 441 QEQRQVEELRMQLQKQKRNNCSEKK----PLPFLAASIKQE-EAVSSCPFASQVPVKRQS 495
E+ + E K +C + K S+ Q+ + ++C Q +R
Sbjct: 665 YEEIETESKVPDNTTSKTTDCLQTKGFSNSTEHKRGSVAQKVQEFNNCLNRGQSSPQRSY 724
Query: 496 SSSECHPPACEAAQLQPLGNAHCVE-----SSDQTNVLSSTFLS-------PQCSPQHSP 543
SSS P + A +P+ + S T +ST LS P SP +P
Sbjct: 725 SSSHSSPAKIQRATQEPVAKIEGTQESQMVGSSSTREKASTVLSQIVASIQPPQSPPETP 784
Query: 544 LGAVKS---PQHISLPPSPNNPHFLPSSSGAQGEGHRVSSP 581
K+ + ++PP + P S+ + + S P
Sbjct: 785 QSGPKACSVEELYAIPPDADVAKSTPKSTPVRPKSLFTSQP 825
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 45.1 bits (105), Expect = 2e-04
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 47/213 (22%)
Query: 71 TRSEDPQNSAGSPPDAKASDTPSTGSL-------GTNQDLASGSENDRNDSASQPSHQSD 123
T +P+ A +PP A+++ TP + G+ +SGS PS +
Sbjct: 541 TPETEPEEPAQAPP-AQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGP 599
Query: 124 AGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSP 183
+ + PP+TP K +G ++ +P + L Y +Y +KS
Sbjct: 600 EPPEEVPPPTTPPVPKVEPKGDGIGPTR---------QPPSQGLGYPKY-------QKSL 643
Query: 184 PPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS--- 240
PP Q+QQ Q Q+L QQQQ Q + HQ P P
Sbjct: 644 PPR-------FQRQQ---QEQLLKQQQQHQWQQ------HQQGSAPPTPVPPSPPQPVTL 687
Query: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPP 273
+ P P P K + G G +P P+PP
Sbjct: 688 GAVPAPQAPPPPPKALYPGALG----RPPPMPP 716
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 530 STFLSPQCSPQ-HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCT 588
S +P SP H P A P H S SP +PH LP++ A P+++
Sbjct: 129 SDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAP 188
Query: 589 AQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGAGGN 627
H PS S + PPFSG S GG+
Sbjct: 189 HTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGH 227
Score = 33.1 bits (74), Expect = 0.87
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 573 GEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGAGGNPCPKS 632
G H V+ +S C +Q+ G D H S S SS S + + S G G+ P S
Sbjct: 32 GREHAVAISLSHTSCKSQSCG-DDSHSSSSSSSSS------SSSSSSSCPGNSGDWDPSS 84
Query: 633 PCVQQKMAGL----HSS-----DKVGPKFSIPSPTFSKSS-SAISEVTQPPS 674
K++GL HSS +G +IP F S S++T PP+
Sbjct: 85 FLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPN 136
>gi|5803117 paired box 8 isoform PAX8A [Homo sapiens]
Length = 450
Score = 44.3 bits (103), Expect = 4e-04
Identities = 83/355 (23%), Positives = 129/355 (36%), Gaps = 74/355 (20%)
Query: 301 LMDRLRPFQDCSGNPVPNFGDITTV--TFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSS 358
+ DRL C + VP+ I + T P LP S +T +LS G S++
Sbjct: 107 IRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLP-MDSCVATKSLSPGHTLIPSSAV 165
Query: 359 SPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLD 418
+PP SP S L S+ A P GS ++D D
Sbjct: 166 TPPESPQSDSLGSTYSINGLLGIAQP-----------------------GSDKRKMDDSD 202
Query: 419 SEKDKMLVEKQKVINELTWKLQQE---QRQVEELRMQLQKQKRNNC----SEKK------ 465
+ ++ ++ Q + L+ + Q +E L ++Q S K
Sbjct: 203 QDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLY 262
Query: 466 PLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP----PACEAAQLQPLGNAHCVES 521
PLP L +++ +A + S P+ R S+ + +P P A Q S
Sbjct: 263 PLPLLNSTLDDGKATLT---PSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSS-SS 318
Query: 522 SDQTNVLSSTFLSPQCSPQHSPL----------------GAVKSPQHISLPPSPNNPHFL 565
S +++ SS FL Q P A+ S + + P P P +
Sbjct: 319 STPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHI 378
Query: 566 PSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFS-------PHSSSLHPPF 613
P+S G+G SS I+ V ++ SG GH P S P+SS L P+
Sbjct: 379 PTS----GQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPY 429
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 43.9 bits (102), Expect = 5e-04
Identities = 117/603 (19%), Positives = 200/603 (33%), Gaps = 117/603 (19%)
Query: 59 EDSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQP 118
EDS S + S+D Q S P D + + G + D+ SA +
Sbjct: 610 EDSEKSDSSDSEYISDDEQKSKNEPEDTEDKE---------------GCQMDKEPSAVKK 654
Query: 119 SHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQK 178
+ P+ P+ + +KS S K DP K +K
Sbjct: 655 KPK----------PTNPVEIKEELKSTSPASEK------ADPGAVKDKASPEPEKDFSEK 698
Query: 179 AEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQ------QQHRFSYLGMHQAQLKEPN- 231
A+ SP P+ + + L + S + + + H ++ + KEP+
Sbjct: 699 AKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSP 758
Query: 232 --EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRI 289
+ + + P S++ + P +PV S QT + G V+
Sbjct: 759 KQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAA----GATATTSTSSTVTVTAPAPAA 814
Query: 290 RGLPVSGTKTALMDRLRP--------FQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSS 341
G PV + L P + +T+T + + P SS
Sbjct: 815 TGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSG 874
Query: 342 STSALSNGFYHFGSTSSSPPISPASSDL-------------SVAGSLPDTFNDASPSFGL 388
S S L S ++ PI+ AS+D+ ++ G++ + +ND
Sbjct: 875 SMSTL------VSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYND------- 921
Query: 389 HPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKL--------- 439
+S GS +E+ L E +K+ Q+ ++E+ L
Sbjct: 922 -------------LSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQ 968
Query: 440 ---QQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSS 496
Q+ R + E++ QL+ +K+ E K + A+ K+E C S Q +
Sbjct: 969 SLEQERDRLIAEVKKQLELEKQQAVDETKKKQW-CANCKKEAIFYCCWNTSYCDYPCQQA 1027
Query: 497 SSECHPPACEAAQLQPLGNAHCVESSDQTNVLS-STFLSPQCSPQHSPLGAVKSPQHISL 555
H +C + P A +++ N S + S Q +P S + + S
Sbjct: 1028 HWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAP--SETASASKEKETSA 1085
Query: 556 PPSPNNPHFL--------PSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHP--PSFSPH 605
S + L PSS VS Q A + H HP P+ H
Sbjct: 1086 EKSKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQPHPNYPAQKYH 1145
Query: 606 SSS 608
S S
Sbjct: 1146 SRS 1148
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 6e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 6e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 6e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 6e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 8e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 8e-04
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 21 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 80
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 81 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 139
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 140 -----AAVKSK-SLGDSKNRHKKPKDPKP 162
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 43.1 bits (100), Expect = 8e-04
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 432 INELTWKLQQEQRQVEELRMQLQ-KQKRNNCSEKKPLPFLAASIKQEEAV--SSCPFASQ 488
+ L +++ EQ+ +L ++++ K+ + +P P + S+K E S P +
Sbjct: 1770 VKALQKRVEDEQKGRSKLPIRVKGKEDVPKKTTHRPHPAASPSLKSERHAPGSPSPKTER 1829
Query: 489 VPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSP--------Q 540
S+ +E HPP +++ + +++ + SS+ + + SP +
Sbjct: 1830 HSTLSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSSSKTEKHSPVSPSTKTER 1889
Query: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSP-ISSQVCTAQNSGAHDGHP 599
HSP+ + K+ +H + PS P S + E H SP + + SG D H
Sbjct: 1890 HSPVSSTKTERHPPVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQ 1949
Query: 600 PSFSPHSSSLHPPFS 614
P + + H P S
Sbjct: 1950 PVSTAGKTEKHLPVS 1964
Score = 36.2 bits (82), Expect = 0.10
Identities = 42/185 (22%), Positives = 68/185 (36%), Gaps = 22/185 (11%)
Query: 442 EQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECH 501
E+ + ++ +++ ++ E+K L +K +E V P S SE H
Sbjct: 1759 EETPIGSIKDKVKALQKRVEDEQKGRSKLPIRVKGKEDVPKKTTHRPHPAASPSLKSERH 1818
Query: 502 PPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNN 561
P + P H SS + T P SP K+ +H + PS
Sbjct: 1819 APGSPS----PKTERHSTLSSS-----AKTERHPPVSPSS------KTEKHSPVSPSAKT 1863
Query: 562 PHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAH----DGHPPSFSPHSSSLHPPFSGAQ 617
P+SS ++ E H SP+S T ++S + HPP + PP S +
Sbjct: 1864 ERHSPASSSSKTEKH---SPVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKRPPVSPSG 1920
Query: 618 ADSSH 622
H
Sbjct: 1921 RTEKH 1925
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 43.1 bits (100), Expect = 8e-04
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 491 VKRQSSSSECHPPACEAAQLQPLGNAHCVESSD-QTNVLSSTFLSPQCSPQHSPLGAVK- 548
+K SS S HPP+ LQ + + + SS Q L+ + P H P G +
Sbjct: 415 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 474
Query: 549 SPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSS 608
+PQ PP +P F+P PI+ C + ++ P P +S+
Sbjct: 475 APQ----PPFAQHP-FVPGGP----------PPITPPTCPSTST-------PPAGPGTSA 512
Query: 609 LHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFSKSSSAISE 668
PP SGA A AGG+ CP P VQ K L +++ P+ P P +S S
Sbjct: 513 -QPPCSGAAASGGSIAGGSSCP-LPTVQIKEEALDDAEE--PESPPPPP---RSPSPEPT 565
Query: 669 VTQPPSY 675
V PS+
Sbjct: 566 VVDTPSH 572
Score = 32.3 bits (72), Expect = 1.5
Identities = 63/277 (22%), Positives = 90/277 (32%), Gaps = 30/277 (10%)
Query: 399 ESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKR 458
E + SS + DS+ + + +KV E + L+ +RQ E++ ++ R
Sbjct: 50 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADR 109
Query: 459 NNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHC 518
+ + K + E S S SS+ + P +
Sbjct: 110 TSSKKTKTQEISRPNSPSEGEGESSDSRS----VNDEGSSDPKDIDQDNRSTSPSIPSPQ 165
Query: 519 VESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPP-SPNNPHFLPSSSGA----QG 573
SD + L Q +P G +P S PP +P P P+ S QG
Sbjct: 166 DNESDSDSSAQQQMLQAQPPALQAPTGVTPAPS--SAPPGTPQLPTPGPTPSATAVPPQG 223
Query: 574 EGHRVSSPISSQVCTA--------QNSGAHDGHPPS-FSPHSSSLHPPFSGAQADSSHGA 624
+P Q TA Q H PPS P S HPP G+
Sbjct: 224 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-----GS 278
Query: 625 GGNPCPKS----PCVQQKMAGLHSSDKVGPKFSIPSP 657
G P S P Q G HS + GP P P
Sbjct: 279 AGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGP 314
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 43.1 bits (100), Expect = 8e-04
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 491 VKRQSSSSECHPPACEAAQLQPLGNAHCVESSD-QTNVLSSTFLSPQCSPQHSPLGAVK- 548
+K SS S HPP+ LQ + + + SS Q L+ + P H P G +
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 549 SPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSS 608
+PQ PP +P F+P PI+ C + ++ P P +S+
Sbjct: 1029 APQ----PPFAQHP-FVPGGP----------PPITPPTCPSTST-------PPAGPGTSA 1066
Query: 609 LHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFSKSSSAISE 668
PP SGA A AGG+ CP P VQ K L +++ P+ P P +S S
Sbjct: 1067 -QPPCSGAAASGGSIAGGSSCP-LPTVQIKEEALDDAEE--PESPPPPP---RSPSPEPT 1119
Query: 669 VTQPPSY 675
V PS+
Sbjct: 1120 VVDTPSH 1126
Score = 32.3 bits (72), Expect = 1.5
Identities = 63/277 (22%), Positives = 90/277 (32%), Gaps = 30/277 (10%)
Query: 399 ESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKR 458
E + SS + DS+ + + +KV E + L+ +RQ E++ ++ R
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADR 663
Query: 459 NNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHC 518
+ + K + E S S SS+ + P +
Sbjct: 664 TSSKKTKTQEISRPNSPSEGEGESSDSRS----VNDEGSSDPKDIDQDNRSTSPSIPSPQ 719
Query: 519 VESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPP-SPNNPHFLPSSSGA----QG 573
SD + L Q +P G +P S PP +P P P+ S QG
Sbjct: 720 DNESDSDSSAQQQMLQAQPPALQAPTGVTPAPS--SAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 574 EGHRVSSPISSQVCTA--------QNSGAHDGHPPS-FSPHSSSLHPPFSGAQADSSHGA 624
+P Q TA Q H PPS P S HPP G+
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-----GS 832
Query: 625 GGNPCPKS----PCVQQKMAGLHSSDKVGPKFSIPSP 657
G P S P Q G HS + GP P P
Sbjct: 833 AGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGP 868
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 43.1 bits (100), Expect = 8e-04
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 491 VKRQSSSSECHPPACEAAQLQPLGNAHCVESSD-QTNVLSSTFLSPQCSPQHSPLGAVK- 548
+K SS S HPP+ LQ + + + SS Q L+ + P H P G +
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 549 SPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSS 608
+PQ PP +P F+P PI+ C + ++ P P +S+
Sbjct: 1029 APQ----PPFAQHP-FVPGGP----------PPITPPTCPSTST-------PPAGPGTSA 1066
Query: 609 LHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFSKSSSAISE 668
PP SGA A AGG+ CP P VQ K L +++ P+ P P +S S
Sbjct: 1067 -QPPCSGAAASGGSIAGGSSCP-LPTVQIKEEALDDAEE--PESPPPPP---RSPSPEPT 1119
Query: 669 VTQPPSY 675
V PS+
Sbjct: 1120 VVDTPSH 1126
Score = 32.3 bits (72), Expect = 1.5
Identities = 63/277 (22%), Positives = 90/277 (32%), Gaps = 30/277 (10%)
Query: 399 ESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKR 458
E + SS + DS+ + + +KV E + L+ +RQ E++ ++ R
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADR 663
Query: 459 NNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHC 518
+ + K + E S S SS+ + P +
Sbjct: 664 TSSKKTKTQEISRPNSPSEGEGESSDSRS----VNDEGSSDPKDIDQDNRSTSPSIPSPQ 719
Query: 519 VESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPP-SPNNPHFLPSSSGA----QG 573
SD + L Q +P G +P S PP +P P P+ S QG
Sbjct: 720 DNESDSDSSAQQQMLQAQPPALQAPTGVTPAPS--SAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 574 EGHRVSSPISSQVCTA--------QNSGAHDGHPPS-FSPHSSSLHPPFSGAQADSSHGA 624
+P Q TA Q H PPS P S HPP G+
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-----GS 832
Query: 625 GGNPCPKS----PCVQQKMAGLHSSDKVGPKFSIPSP 657
G P S P Q G HS + GP P P
Sbjct: 833 AGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGP 868
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 43.1 bits (100), Expect = 8e-04
Identities = 56/200 (28%), Positives = 72/200 (36%), Gaps = 36/200 (18%)
Query: 150 SKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQ 209
S N+H +P P + + Q PP Q PPP Q QLQ Q
Sbjct: 200 STNQHPQPAPQAPSQSQQQPLQPTPPQQ-----PPPASQ------QPPAPTSQLQQAPQP 248
Query: 210 QQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPG 269
QQ Q H S +N N S P + P K S S G+ P
Sbjct: 249 QQHQPHSHS-----------------QNQNQPS-PTQQSSSPPQKPSQSPGHGL----PS 286
Query: 270 PL-PPNLDDLKVSELRQQLRIRGLPVSG--TKTALMDRLRPFQDCSGNPVPNFGDITTVT 326
PL PPN L + L Q +S + A + L Q +G V N T
Sbjct: 287 PLTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGT 346
Query: 327 FPVTPNTLPNYQSSSSTSAL 346
P+ PN P+ Q++S T L
Sbjct: 347 IPLMPNPGPSSQAASGTQGL 366
Score = 33.9 bits (76), Expect = 0.51
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 426 VEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPF 485
++ + + L +LQQ Q Q+++ + Q Q+Q + ++ A S Q++ + P
Sbjct: 166 LQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPP 225
Query: 486 ASQVPVKRQSSSSECHPPACEAAQLQ--PLGNAHCVESSDQT-NVLSST--FLSPQCSPQ 540
P +Q PPA +QLQ P H S Q N S T SP P
Sbjct: 226 QQPPPASQQ-------PPA-PTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPS 277
Query: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQ 585
SP + SP PP+P P +S A +SS SSQ
Sbjct: 278 QSPGHGLPSP---LTPPNPLQLVNNPLASQAAAAAAAMSSIASSQ 319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.124 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,261,292
Number of Sequences: 37866
Number of extensions: 1714524
Number of successful extensions: 12666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 9654
Number of HSP's gapped (non-prelim): 2630
length of query: 684
length of database: 18,247,518
effective HSP length: 109
effective length of query: 575
effective length of database: 14,120,124
effective search space: 8119071300
effective search space used: 8119071300
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.