Guide to the Human Genome
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Search of human proteins with 226371748

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226371748 peptide transporter 2 isoform b [Homo sapiens]
         (698 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226371748 peptide transporter 2 isoform b [Homo sapiens]          1406   0.0  
gi|226371746 peptide transporter 2 isoform a [Homo sapiens]          1390   0.0  
gi|4827008 solute carrier family 15 (oligopeptide transporter), ...   603   e-172
gi|21717816 solute carrier family 15, member 4 [Homo sapiens]          98   2e-20
gi|7706117 solute carrier family 15, member 3 [Homo sapiens]           82   1e-15
gi|91208420 bassoon protein [Homo sapiens]                             33   1.2  
gi|21735483 transient receptor potential cation channel, subfami...    32   2.0  
gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens]     32   2.6  
gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]     32   2.6  
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  31   3.4  
gi|31543806 thrombospondin 4 precursor [Homo sapiens]                  31   4.4  
gi|21361891 SH2 domain containing 4A [Homo sapiens]                    31   4.4  
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    31   4.4  
gi|46409292 dpy-19-like 3 [Homo sapiens]                               30   5.8  
gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [H...    30   5.8  
gi|16751843 toll-like receptor 5 [Homo sapiens]                        30   7.6  
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase...    30   9.9  
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol...    30   9.9  

>gi|226371748 peptide transporter 2 isoform b [Homo sapiens]
          Length = 698

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 698/698 (100%), Positives = 698/698 (100%)

Query: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60
           MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY
Sbjct: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60

Query: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120
           YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS
Sbjct: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120

Query: 121 LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC 180
           LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC
Sbjct: 121 LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC 180

Query: 181 FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS 240
           FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS
Sbjct: 181 FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS 240

Query: 241 GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN 300
           GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN
Sbjct: 241 GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN 300

Query: 301 RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF 360
           RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF
Sbjct: 301 RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF 360

Query: 361 AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH 420
           AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH
Sbjct: 361 AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH 420

Query: 421 YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT 480
           YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT
Sbjct: 421 YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT 480

Query: 481 NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN 540
           NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN
Sbjct: 481 NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN 540

Query: 541 LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE 600
           LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE
Sbjct: 541 LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE 600

Query: 601 FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI 660
           FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI
Sbjct: 601 FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI 660

Query: 661 MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL 698
           MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL
Sbjct: 661 MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL 698


>gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
          Length = 729

 Score = 1390 bits (3597), Expect = 0.0
 Identities = 698/729 (95%), Positives = 698/729 (95%), Gaps = 31/729 (4%)

Query: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60
           MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY
Sbjct: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60

Query: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK-------- 112
           YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK        
Sbjct: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV 120

Query: 113 -----------------------VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 149
                                  VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER
Sbjct: 121 YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 180

Query: 150 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 209
           TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK
Sbjct: 181 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 240

Query: 210 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 269
           IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT
Sbjct: 241 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 300

Query: 270 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 329
           RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD
Sbjct: 301 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 360

Query: 330 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 389
           FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN
Sbjct: 361 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 420

Query: 390 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 449
           LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS
Sbjct: 421 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 480

Query: 450 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 509
           VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG
Sbjct: 481 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 540

Query: 510 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 569
           EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED
Sbjct: 541 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 600

Query: 570 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 629
           IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV
Sbjct: 601 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 660

Query: 630 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 689
           LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI
Sbjct: 661 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 720

Query: 690 KLETKKTKL 698
           KLETKKTKL
Sbjct: 721 KLETKKTKL 729


>gi|4827008 solute carrier family 15 (oligopeptide transporter),
           member 1 [Homo sapiens]
          Length = 708

 Score =  603 bits (1554), Expect = e-172
 Identities = 335/698 (47%), Positives = 443/698 (63%), Gaps = 85/698 (12%)

Query: 42  YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101
           YPLSI FIVVNEFCERFSYYGM+A+LILYF  F+ W+++ ST+IYH F +LCY TPILGA
Sbjct: 12  YPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGA 71

Query: 102 AIADSWLGKFK----------------------------------------VLSLIGLSL 121
            IADSWLGKFK                                        VLSLIGL+L
Sbjct: 72  LIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLAL 131

Query: 122 IALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCF 181
           IALGTGGIKPCV+AFGGDQFEE   ++R R+FS+FYL+INAGSL+ST ITPMLR  VQ  
Sbjct: 132 IALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIFYLAINAGSLLSTIITPMLR--VQQC 189

Query: 182 G----EDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 237
           G    + CY LAFGVP  LM +AL+VF +GS +Y K  P+GNI+ +V KCI FAI NRF+
Sbjct: 190 GIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIKNRFR 249

Query: 238 NRSGDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAI 297
           +RS   PKR+HWLDWA EKY ++LI  +K +TRV+FLYIPLPMFWAL DQQGSRWTLQA 
Sbjct: 250 HRSKAFPKREHWLDWAKEKYDERLISQIKMVTRVMFLYIPLPMFWALFDQQGSRWTLQAT 309

Query: 298 RMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILAC 357
            M+  +G   +QPDQMQ +N +L++I +P+FD V+Y L++KCG NF+SL+KMAVGM+LA 
Sbjct: 310 TMSGKIGALEIQPDQMQTVNAILIVIMVPIFDAVLYPLIAKCGFNFTSLKKMAVGMVLAS 369

Query: 358 LAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVG--------NENNSLLI 409
           +AF VAA V+++I++  P  P   EV ++VLN+ ++ + +++ G        ++ N+ + 
Sbjct: 370 MAFVVAAIVQVEIDKTLPVFPKGNEVQIKVLNIGNNTMNISLPGEMVTLGPMSQTNAFMT 429

Query: 410 ESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISS 469
             +    +    S     T   D     + H L ++        N Y +V  +DG     
Sbjct: 430 FDVNKLTRINISSPGSPVTAVTDDFKQGQRHTLLVWA------PNHYQVV--KDG----- 476

Query: 470 MMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVH 529
                   +   G   +RFVNT ++ + I++S     N+   Y  S Y+    G      
Sbjct: 477 -----LNQKPEKGENGIRFVNTFNELITITMSGKVYANI-SSYNASTYQFFPSGIKGFTI 530

Query: 530 CRTE-----DKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQY 584
             TE       NF  N   L+FG+AY +++    +   +    EDI AN +++A Q+PQY
Sbjct: 531 SSTEIPPQCQPNF--NTFYLEFGSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQY 588

Query: 585 ALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVA---QFSGLVQW 641
            L+T GEV+FSVTGLEFSYSQAPS+MKSVLQA WLLT+AVGNIIVL+VA   QFS   QW
Sbjct: 589 FLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFS--KQW 646

Query: 642 AEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADK 679
           AE+ILF+ LLLV+C+IF+IM  +Y  +   ++    D+
Sbjct: 647 AEYILFAALLLVVCVIFAIMARFYTYINPAEIEAQFDE 684


>gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
          Length = 577

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 88/402 (21%), Positives = 167/402 (41%), Gaps = 92/402 (22%)

Query: 49  IVVNEFCERFSYYGMKAVLILYFLYF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107
           +++ E  ER ++YG+ + L+L+       W    ++     F  L Y     G  +AD+ 
Sbjct: 40  VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99

Query: 108 LGKFKVLSL--------------------------------------------------I 117
           LG+ + + L                                                   
Sbjct: 100 LGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFA 159

Query: 118 GLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGD 177
           GL L+ LG   +K  +  FG DQ +++  E   R+F+ FY SIN G+++S      ++ +
Sbjct: 160 GLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQN 219

Query: 178 VQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 237
           V       +   + +P + + +A VVF  G  ++   PP+G+    +FK + ++  +  +
Sbjct: 220 VS------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCS--Q 271

Query: 238 NRSG---------------------DIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYI 276
            RSG                     D  K  H   +  EK     + DVKAL +++ +++
Sbjct: 272 KRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEK-----VEDVKALVKIVPVFL 326

Query: 277 PLPMFWALLDQQGSRWTLQAIRM------NRNLGFFVLQPDQMQVLNPLLVLIFIPLFDF 330
            L  +W +  Q  + + LQ++ +      N       L    + + + +L+L+ IPL D 
Sbjct: 327 ALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDK 386

Query: 331 VIYRLVSKCGINFSSLRKMAVGM-ILACLAFAVAAAVEIKIN 371
           ++  ++ + G+  SSL+++AVGM  + C AFA       ++N
Sbjct: 387 LVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 572 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 628
           A  +S+ WQ+PQY L+   E+  S+ GLEF+YS AP SM+S +   +     VG+ +
Sbjct: 446 AADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502


>gi|7706117 solute carrier family 15, member 3 [Homo sapiens]
          Length = 581

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 34/277 (12%)

Query: 118 GLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGD 177
           GL L+ L    ++  + +FG DQ  +   +   R+F+ FY SIN G+++S  +   ++ +
Sbjct: 164 GLLLLGLAASSVRSNLTSFGADQVMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQN 223

Query: 178 VQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKC--------IW 229
           +       + L + +P   + +A  +F   + ++   PP G+ V+ + K         +W
Sbjct: 224 IS------FLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLW 277

Query: 230 FAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQG 289
              S R +  +  +   +     A+   P++ I + + L ++L + + L  +W +  Q  
Sbjct: 278 QRHSARDRQCARVLADERSPQPGAS---PQEDIANFQVLVKILPVMVTLVPYWMVYFQMQ 334

Query: 290 SRWTLQAIRMN----------------RNLGFFVLQPDQMQVL-NPLLVLIFIPLFDFVI 332
           S + LQ + ++                R  G     P+   +L N ++VLI +PL D +I
Sbjct: 335 STYVLQGLHLHIPNIFPANPANISVALRAQGSSYTIPEAWLLLANVVVVLILVPLKDRLI 394

Query: 333 YRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIK 369
             L+ +C +  S+L+KMA+GM     +  VA  +E++
Sbjct: 395 DPLLLRCKLLPSALQKMALGMFFGFTSVIVAGVLEME 431



 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 23/57 (40%), Positives = 36/57 (63%)

Query: 572 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 628
           A  +SI WQ+PQY L+   E+  S+ GLEF+YS+AP SM+  +   +     VG+++
Sbjct: 453 AAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLL 509


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 15   SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46
            +P S+ ++PP PP PP  P     G++ PL++
Sbjct: 1598 TPPSVSQLPPEPPGPPGFPRVPSAGADGPLAL 1629


>gi|21735483 transient receptor potential cation channel, subfamily
           V, member 3 [Homo sapiens]
          Length = 790

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 607 PSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYY 664
           PS ++S+L  AW   +     ++++++ F  L  + E++  +CL+L + L ++ M YY
Sbjct: 510 PSDLQSILSDAWFHFVFFIQAVLVILSVFLYLFAYKEYL--ACLVLAMALGWANMLYY 565


>gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens]
          Length = 1165

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 7   NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45
           N+S  TL   V IE  P  PPS    PS  +C  +  LS
Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477


>gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]
          Length = 2002

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 7   NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45
           N+S  TL   V IE  P  PPS    PS  +C  +  LS
Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 5    QKNESKETLF--SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46
            Q  E+ + L+  SP S E  PP PP PP  P+P    S  P+ I
Sbjct: 1939 QYREAYDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKI 1982


>gi|31543806 thrombospondin 4 precursor [Homo sapiens]
          Length = 961

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 15  SPVSIEEVPPRPPSPPKKPSPTICGSN 41
           SP     VPP PP+PP +P P  C SN
Sbjct: 268 SPTPSTVVPPAPPAPPTRP-PRRCDSN 293


>gi|21361891 SH2 domain containing 4A [Homo sapiens]
          Length = 454

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 5   QKNESKETLFSPVSIEEVPPRPPSPPK 31
           QK    E L SP+ + + P RPP PPK
Sbjct: 265 QKGRGGERLQSPLRVPQKPERPPLPPK 291


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 16  PVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNE 53
           P  +  +PP PP PP  P P   G   P S  F  ++E
Sbjct: 403 PDELAGLPPPPPPPPPPPPPPPAGGAKPCSKTFGTMHE 440


>gi|46409292 dpy-19-like 3 [Homo sapiens]
          Length = 716

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 576 SIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQF 635
           S+ WQ  Q+ ++    V+F++  L+         M   ++A WL  I + +++++ + QF
Sbjct: 255 SLTWQFNQFMMLMQALVLFTLDSLD---------MLPAVKATWLYGIQITSLLLVCILQF 305


>gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [Homo
           sapiens]
          Length = 1009

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 13/71 (18%)

Query: 349 MAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLL 408
           +A+G++LACL     AA+E+  N     Q  P+E         D EV +  V    NSL+
Sbjct: 838 LAIGLLLACL----VAALELWWNSNRCHQETPKE---------DKEVNLEQVHRRMNSLM 884

Query: 409 IESIKSFQKTP 419
            E I   Q +P
Sbjct: 885 DEDIAHKQISP 895


>gi|16751843 toll-like receptor 5 [Homo sapiens]
          Length = 858

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 72  LYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120
           +YFLH   D    ++H F    YF  +  A + D +    K L+ + LS
Sbjct: 107 IYFLH--PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 153


>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2
           [Homo sapiens]
          Length = 883

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 13/93 (13%)

Query: 23  PPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNE--- 79
           P RPP PP+ P P       P+ + F+        +S  G + V IL    F +  E   
Sbjct: 65  PARPPVPPRPPRPPETARTEPVVLVFVE-----SAYSQLGQEIVAILESSRFRYSTELAP 119

Query: 80  -----DTSTSIYHAFSSLCYFTPILGAAIADSW 107
                 T T   H    L  +  +L     D+W
Sbjct: 120 GRGDMPTLTDNTHGRYVLVIYENLLKYVNLDAW 152


>gi|47825361 non-specific cytotoxic cell receptor protein 1
          homolog [Homo sapiens]
          Length = 275

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 16 PVSIEEVPPRP--PSPPKKPSP 35
          P S++E+PP P  PSPP  P P
Sbjct: 19 PASLQELPPSPRSPSPPPSPPP 40


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,340,943
Number of Sequences: 37866
Number of extensions: 1160903
Number of successful extensions: 6655
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6577
Number of HSP's gapped (non-prelim): 65
length of query: 698
length of database: 18,247,518
effective HSP length: 109
effective length of query: 589
effective length of database: 14,120,124
effective search space: 8316753036
effective search space used: 8316753036
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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