BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|226371748 peptide transporter 2 isoform b [Homo sapiens] (698 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|226371748 peptide transporter 2 isoform b [Homo sapiens] 1406 0.0 gi|226371746 peptide transporter 2 isoform a [Homo sapiens] 1390 0.0 gi|4827008 solute carrier family 15 (oligopeptide transporter), ... 603 e-172 gi|21717816 solute carrier family 15, member 4 [Homo sapiens] 98 2e-20 gi|7706117 solute carrier family 15, member 3 [Homo sapiens] 82 1e-15 gi|91208420 bassoon protein [Homo sapiens] 33 1.2 gi|21735483 transient receptor potential cation channel, subfami... 32 2.0 gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens] 32 2.6 gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens] 32 2.6 gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 31 3.4 gi|31543806 thrombospondin 4 precursor [Homo sapiens] 31 4.4 gi|21361891 SH2 domain containing 4A [Homo sapiens] 31 4.4 gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 31 4.4 gi|46409292 dpy-19-like 3 [Homo sapiens] 30 5.8 gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [H... 30 5.8 gi|16751843 toll-like receptor 5 [Homo sapiens] 30 7.6 gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase... 30 9.9 gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 30 9.9 >gi|226371748 peptide transporter 2 isoform b [Homo sapiens] Length = 698 Score = 1406 bits (3639), Expect = 0.0 Identities = 698/698 (100%), Positives = 698/698 (100%) Query: 1 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY Sbjct: 1 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60 Query: 61 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS Sbjct: 61 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120 Query: 121 LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC 180 LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC Sbjct: 121 LIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQC 180 Query: 181 FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS 240 FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS Sbjct: 181 FGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRS 240 Query: 241 GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN 300 GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN Sbjct: 241 GDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN 300 Query: 301 RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF 360 RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF Sbjct: 301 RNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAF 360 Query: 361 AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH 420 AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH Sbjct: 361 AVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPH 420 Query: 421 YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT 480 YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT Sbjct: 421 YSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISSMMVKDTESRTT 480 Query: 481 NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN 540 NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN Sbjct: 481 NGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLN 540 Query: 541 LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE 600 LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE Sbjct: 541 LGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLE 600 Query: 601 FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI 660 FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI Sbjct: 601 FSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSI 660 Query: 661 MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL 698 MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL Sbjct: 661 MGYYYVPVKTEDMRGPADKHIPHIQGNMIKLETKKTKL 698 >gi|226371746 peptide transporter 2 isoform a [Homo sapiens] Length = 729 Score = 1390 bits (3597), Expect = 0.0 Identities = 698/729 (95%), Positives = 698/729 (95%), Gaps = 31/729 (4%) Query: 1 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY Sbjct: 1 MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60 Query: 61 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK-------- 112 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK Sbjct: 61 YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV 120 Query: 113 -----------------------VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 149 VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER Sbjct: 121 YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 180 Query: 150 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 209 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK Sbjct: 181 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 240 Query: 210 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 269 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT Sbjct: 241 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 300 Query: 270 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 329 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD Sbjct: 301 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 360 Query: 330 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 389 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN Sbjct: 361 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 420 Query: 390 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 449 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS Sbjct: 421 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 480 Query: 450 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 509 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG Sbjct: 481 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 540 Query: 510 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 569 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED Sbjct: 541 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 600 Query: 570 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 629 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV Sbjct: 601 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 660 Query: 630 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 689 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI Sbjct: 661 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 720 Query: 690 KLETKKTKL 698 KLETKKTKL Sbjct: 721 KLETKKTKL 729 >gi|4827008 solute carrier family 15 (oligopeptide transporter), member 1 [Homo sapiens] Length = 708 Score = 603 bits (1554), Expect = e-172 Identities = 335/698 (47%), Positives = 443/698 (63%), Gaps = 85/698 (12%) Query: 42 YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101 YPLSI FIVVNEFCERFSYYGM+A+LILYF F+ W+++ ST+IYH F +LCY TPILGA Sbjct: 12 YPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGA 71 Query: 102 AIADSWLGKFK----------------------------------------VLSLIGLSL 121 IADSWLGKFK VLSLIGL+L Sbjct: 72 LIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLAL 131 Query: 122 IALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCF 181 IALGTGGIKPCV+AFGGDQFEE ++R R+FS+FYL+INAGSL+ST ITPMLR VQ Sbjct: 132 IALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIFYLAINAGSLLSTIITPMLR--VQQC 189 Query: 182 G----EDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 237 G + CY LAFGVP LM +AL+VF +GS +Y K P+GNI+ +V KCI FAI NRF+ Sbjct: 190 GIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIKNRFR 249 Query: 238 NRSGDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAI 297 +RS PKR+HWLDWA EKY ++LI +K +TRV+FLYIPLPMFWAL DQQGSRWTLQA Sbjct: 250 HRSKAFPKREHWLDWAKEKYDERLISQIKMVTRVMFLYIPLPMFWALFDQQGSRWTLQAT 309 Query: 298 RMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILAC 357 M+ +G +QPDQMQ +N +L++I +P+FD V+Y L++KCG NF+SL+KMAVGM+LA Sbjct: 310 TMSGKIGALEIQPDQMQTVNAILIVIMVPIFDAVLYPLIAKCGFNFTSLKKMAVGMVLAS 369 Query: 358 LAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVG--------NENNSLLI 409 +AF VAA V+++I++ P P EV ++VLN+ ++ + +++ G ++ N+ + Sbjct: 370 MAFVVAAIVQVEIDKTLPVFPKGNEVQIKVLNIGNNTMNISLPGEMVTLGPMSQTNAFMT 429 Query: 410 ESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISS 469 + + S T D + H L ++ N Y +V +DG Sbjct: 430 FDVNKLTRINISSPGSPVTAVTDDFKQGQRHTLLVWA------PNHYQVV--KDG----- 476 Query: 470 MMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVH 529 + G +RFVNT ++ + I++S N+ Y S Y+ G Sbjct: 477 -----LNQKPEKGENGIRFVNTFNELITITMSGKVYANI-SSYNASTYQFFPSGIKGFTI 530 Query: 530 CRTE-----DKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQY 584 TE NF N L+FG+AY +++ + + EDI AN +++A Q+PQY Sbjct: 531 SSTEIPPQCQPNF--NTFYLEFGSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQY 588 Query: 585 ALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVA---QFSGLVQW 641 L+T GEV+FSVTGLEFSYSQAPS+MKSVLQA WLLT+AVGNIIVL+VA QFS QW Sbjct: 589 FLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFS--KQW 646 Query: 642 AEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADK 679 AE+ILF+ LLLV+C+IF+IM +Y + ++ D+ Sbjct: 647 AEYILFAALLLVVCVIFAIMARFYTYINPAEIEAQFDE 684 >gi|21717816 solute carrier family 15, member 4 [Homo sapiens] Length = 577 Score = 98.2 bits (243), Expect = 2e-20 Identities = 88/402 (21%), Positives = 167/402 (41%), Gaps = 92/402 (22%) Query: 49 IVVNEFCERFSYYGMKAVLILYFLYF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107 +++ E ER ++YG+ + L+L+ W ++ F L Y G +AD+ Sbjct: 40 VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99 Query: 108 LGKFKVLSL--------------------------------------------------I 117 LG+ + + L Sbjct: 100 LGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFA 159 Query: 118 GLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGD 177 GL L+ LG +K + FG DQ +++ E R+F+ FY SIN G+++S ++ + Sbjct: 160 GLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQN 219 Query: 178 VQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 237 V + + +P + + +A VVF G ++ PP+G+ +FK + ++ + + Sbjct: 220 VS------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCS--Q 271 Query: 238 NRSG---------------------DIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYI 276 RSG D K H + EK + DVKAL +++ +++ Sbjct: 272 KRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEK-----VEDVKALVKIVPVFL 326 Query: 277 PLPMFWALLDQQGSRWTLQAIRM------NRNLGFFVLQPDQMQVLNPLLVLIFIPLFDF 330 L +W + Q + + LQ++ + N L + + + +L+L+ IPL D Sbjct: 327 ALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDK 386 Query: 331 VIYRLVSKCGINFSSLRKMAVGM-ILACLAFAVAAAVEIKIN 371 ++ ++ + G+ SSL+++AVGM + C AFA ++N Sbjct: 387 LVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428 Score = 53.5 bits (127), Expect = 6e-07 Identities = 23/57 (40%), Positives = 35/57 (61%) Query: 572 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 628 A +S+ WQ+PQY L+ E+ S+ GLEF+YS AP SM+S + + VG+ + Sbjct: 446 AADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502 >gi|7706117 solute carrier family 15, member 3 [Homo sapiens] Length = 581 Score = 82.4 bits (202), Expect = 1e-15 Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 34/277 (12%) Query: 118 GLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGD 177 GL L+ L ++ + +FG DQ + + R+F+ FY SIN G+++S + ++ + Sbjct: 164 GLLLLGLAASSVRSNLTSFGADQVMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQN 223 Query: 178 VQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKC--------IW 229 + + L + +P + +A +F + ++ PP G+ V+ + K +W Sbjct: 224 IS------FLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLW 277 Query: 230 FAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQG 289 S R + + + + A+ P++ I + + L ++L + + L +W + Q Sbjct: 278 QRHSARDRQCARVLADERSPQPGAS---PQEDIANFQVLVKILPVMVTLVPYWMVYFQMQ 334 Query: 290 SRWTLQAIRMN----------------RNLGFFVLQPDQMQVL-NPLLVLIFIPLFDFVI 332 S + LQ + ++ R G P+ +L N ++VLI +PL D +I Sbjct: 335 STYVLQGLHLHIPNIFPANPANISVALRAQGSSYTIPEAWLLLANVVVVLILVPLKDRLI 394 Query: 333 YRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIK 369 L+ +C + S+L+KMA+GM + VA +E++ Sbjct: 395 DPLLLRCKLLPSALQKMALGMFFGFTSVIVAGVLEME 431 Score = 53.9 bits (128), Expect = 5e-07 Identities = 23/57 (40%), Positives = 36/57 (63%) Query: 572 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 628 A +SI WQ+PQY L+ E+ S+ GLEF+YS+AP SM+ + + VG+++ Sbjct: 453 AAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLL 509 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 32.7 bits (73), Expect = 1.2 Identities = 12/32 (37%), Positives = 20/32 (62%) Query: 15 SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46 +P S+ ++PP PP PP P G++ PL++ Sbjct: 1598 TPPSVSQLPPEPPGPPGFPRVPSAGADGPLAL 1629 >gi|21735483 transient receptor potential cation channel, subfamily V, member 3 [Homo sapiens] Length = 790 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 607 PSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYY 664 PS ++S+L AW + ++++++ F L + E++ +CL+L + L ++ M YY Sbjct: 510 PSDLQSILSDAWFHFVFFIQAVLVILSVFLYLFAYKEYL--ACLVLAMALGWANMLYY 565 >gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens] Length = 1165 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 19/39 (48%) Query: 7 NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45 N+S TL V IE P PPS PS +C + LS Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477 >gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens] Length = 2002 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 19/39 (48%) Query: 7 NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45 N+S TL V IE P PPS PS +C + LS Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477 >gi|126090663 zinc finger homeodomain 4 [Homo sapiens] Length = 3571 Score = 31.2 bits (69), Expect = 3.4 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 5 QKNESKETLF--SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46 Q E+ + L+ SP S E PP PP PP P+P S P+ I Sbjct: 1939 QYREAYDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKI 1982 >gi|31543806 thrombospondin 4 precursor [Homo sapiens] Length = 961 Score = 30.8 bits (68), Expect = 4.4 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 15 SPVSIEEVPPRPPSPPKKPSPTICGSN 41 SP VPP PP+PP +P P C SN Sbjct: 268 SPTPSTVVPPAPPAPPTRP-PRRCDSN 293 >gi|21361891 SH2 domain containing 4A [Homo sapiens] Length = 454 Score = 30.8 bits (68), Expect = 4.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Query: 5 QKNESKETLFSPVSIEEVPPRPPSPPK 31 QK E L SP+ + + P RPP PPK Sbjct: 265 QKGRGGERLQSPLRVPQKPERPPLPPK 291 >gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] Length = 663 Score = 30.8 bits (68), Expect = 4.4 Identities = 14/38 (36%), Positives = 18/38 (47%) Query: 16 PVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNE 53 P + +PP PP PP P P G P S F ++E Sbjct: 403 PDELAGLPPPPPPPPPPPPPPPAGGAKPCSKTFGTMHE 440 >gi|46409292 dpy-19-like 3 [Homo sapiens] Length = 716 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 9/60 (15%) Query: 576 SIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQF 635 S+ WQ Q+ ++ V+F++ L+ M ++A WL I + +++++ + QF Sbjct: 255 SLTWQFNQFMMLMQALVLFTLDSLD---------MLPAVKATWLYGIQITSLLLVCILQF 305 >gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [Homo sapiens] Length = 1009 Score = 30.4 bits (67), Expect = 5.8 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 13/71 (18%) Query: 349 MAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLL 408 +A+G++LACL AA+E+ N Q P+E D EV + V NSL+ Sbjct: 838 LAIGLLLACL----VAALELWWNSNRCHQETPKE---------DKEVNLEQVHRRMNSLM 884 Query: 409 IESIKSFQKTP 419 E I Q +P Sbjct: 885 DEDIAHKQISP 895 >gi|16751843 toll-like receptor 5 [Homo sapiens] Length = 858 Score = 30.0 bits (66), Expect = 7.6 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 72 LYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKVLSLIGLS 120 +YFLH D ++H F YF + A + D + K L+ + LS Sbjct: 107 IYFLH--PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 153 >gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2 [Homo sapiens] Length = 883 Score = 29.6 bits (65), Expect = 9.9 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Query: 23 PPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNE--- 79 P RPP PP+ P P P+ + F+ +S G + V IL F + E Sbjct: 65 PARPPVPPRPPRPPETARTEPVVLVFVE-----SAYSQLGQEIVAILESSRFRYSTELAP 119 Query: 80 -----DTSTSIYHAFSSLCYFTPILGAAIADSW 107 T T H L + +L D+W Sbjct: 120 GRGDMPTLTDNTHGRYVLVIYENLLKYVNLDAW 152 >gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog [Homo sapiens] Length = 275 Score = 29.6 bits (65), Expect = 9.9 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%) Query: 16 PVSIEEVPPRP--PSPPKKPSP 35 P S++E+PP P PSPP P P Sbjct: 19 PASLQELPPSPRSPSPPPSPPP 40 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.138 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,340,943 Number of Sequences: 37866 Number of extensions: 1160903 Number of successful extensions: 6655 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 6577 Number of HSP's gapped (non-prelim): 65 length of query: 698 length of database: 18,247,518 effective HSP length: 109 effective length of query: 589 effective length of database: 14,120,124 effective search space: 8316753036 effective search space used: 8316753036 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.