BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|226371643 leprecan 1 isoform 2 [Homo sapiens] (697 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|226371643 leprecan 1 isoform 2 [Homo sapiens] 1415 0.0 gi|186928835 leprecan 1 isoform 1 [Homo sapiens] 1393 0.0 gi|27764882 leprecan-like 1 isoform a [Homo sapiens] 655 0.0 gi|28466983 leprecan-like 2 [Homo sapiens] 550 e-156 gi|197313662 leprecan-like 1 isoform b [Homo sapiens] 531 e-151 gi|5453601 cartilage associated protein precursor [Homo sapiens] 214 2e-55 gi|5454038 synaptonemal complex protein SC65 [Homo sapiens] 187 2e-47 gi|239753578 PREDICTED: similar to cartilage associated protein ... 75 3e-13 gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] 57 6e-08 gi|33589818 prolyl 4-hydroxylase, alpha III subunit precursor [H... 37 0.062 gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 35 0.24 gi|13489073 egl nine homolog 1 [Homo sapiens] 35 0.31 gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 33 1.2 gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 33 1.2 gi|47519562 reticulon 4 isoform E [Homo sapiens] 32 2.6 gi|24431935 reticulon 4 isoform A [Homo sapiens] 32 2.6 gi|56549696 E1A binding protein p400 [Homo sapiens] 32 2.6 gi|83921609 hypothetical protein LOC127254 [Homo sapiens] 32 2.6 gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 31 3.4 gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 31 3.4 gi|63252886 prolyl 4-hydroxylase, alpha I subunit isoform 1 prec... 31 4.4 gi|217272851 prolyl 4-hydroxylase, alpha I subunit isoform 3 pre... 31 4.4 gi|217272849 prolyl 4-hydroxylase, alpha I subunit isoform 2 pre... 31 4.4 gi|63252888 prolyl 4-hydroxylase, alpha I subunit isoform 2 prec... 31 4.4 gi|11545787 egl nine homolog 3 [Homo sapiens] 30 5.8 gi|9789865 eukaryotic translation initiation factor 4E nuclear i... 30 5.8 gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens] 30 7.6 gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] 30 7.6 gi|5729734 activator of S phase kinase [Homo sapiens] 30 9.9 gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens] 30 9.9 >gi|226371643 leprecan 1 isoform 2 [Homo sapiens] Length = 697 Score = 1415 bits (3662), Expect = 0.0 Identities = 697/697 (100%), Positives = 697/697 (100%) Query: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER Sbjct: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60 Query: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL Sbjct: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120 Query: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ Sbjct: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180 Query: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE Sbjct: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240 Query: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL Sbjct: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300 Query: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE Sbjct: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360 Query: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE Sbjct: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420 Query: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD Sbjct: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480 Query: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN Sbjct: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540 Query: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC Sbjct: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600 Query: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG Sbjct: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660 Query: 661 VKAVTRGQRCAIALWFTLDPRHSERVRAARAGQGAGR 697 VKAVTRGQRCAIALWFTLDPRHSERVRAARAGQGAGR Sbjct: 661 VKAVTRGQRCAIALWFTLDPRHSERVRAARAGQGAGR 697 >gi|186928835 leprecan 1 isoform 1 [Homo sapiens] Length = 736 Score = 1393 bits (3606), Expect = 0.0 Identities = 686/687 (99%), Positives = 686/687 (99%) Query: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER Sbjct: 1 MAVRALKLLTTLLAVVAAASQAEVESEAGWGMVTPDLLFAEGTAAYARGDWPGVVLSMER 60 Query: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL Sbjct: 61 ALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACL 120 Query: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ Sbjct: 121 RRCLGPPAAHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQ 180 Query: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE Sbjct: 181 QNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYE 240 Query: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL Sbjct: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFL 300 Query: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE Sbjct: 301 PSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRE 360 Query: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE Sbjct: 361 SAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQE 420 Query: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD Sbjct: 421 IGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISD 480 Query: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN Sbjct: 481 HECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYN 540 Query: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC Sbjct: 541 VTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVC 600 Query: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG Sbjct: 601 VKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHG 660 Query: 661 VKAVTRGQRCAIALWFTLDPRHSERVR 687 VKAVTRGQRCAIALWFTLDPRHSER R Sbjct: 661 VKAVTRGQRCAIALWFTLDPRHSERDR 687 >gi|27764882 leprecan-like 1 isoform a [Homo sapiens] Length = 708 Score = 655 bits (1691), Expect = 0.0 Identities = 336/661 (50%), Positives = 435/661 (65%), Gaps = 30/661 (4%) Query: 36 DLLFAEGTAAYARGDWPGVVLSMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSP 95 DLL+A G AAY GD+ V +E ALRS LR +R RC CAA P L P P P Sbjct: 45 DLLYASGAAAYYSGDYERAVRDLEAALRSHRRLREIRTRCARHCAARHP--LPP---PPP 99 Query: 96 AQASGAAALRDLSFFGGLLRRAACLRRCL-----GPPAAHSLSEEMELEFRKRSPYNYLQ 150 + GA +L F LL RA C R C GP + H +SE++ +F++R PYNYLQ Sbjct: 100 GEGPGA----ELPLFRSLLGRARCYRSCETQRLGGPASRHRVSEDVRSDFQRRVPYNYLQ 155 Query: 151 VAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFR 210 AY K+N+LEKAV AAHTFFV NPEHMEMQQN++ Y+ +GV+ D E +PHM+ + Sbjct: 156 RAYIKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDREAKPHMESYN 215 Query: 211 LGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITD 270 GV+ Y + + A+ H E AL+EYFV ECR LCEGP ++ Y YL Y A L++AI D Sbjct: 216 AGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIAD 275 Query: 271 HYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLF 330 HY+QVL C+ CV ELA+ P R P E+FLP HY+YLQFAYY +G Y +A+ECAK YLL Sbjct: 276 HYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLC 335 Query: 331 FPNDEVMNQNLAYYAAMLGEE-HTRSIGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVD 389 P+DE + N+ YY ++L + SI RE + +R LE EL+ A + G + + Sbjct: 336 HPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFSYTE 395 Query: 390 PDSWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449 P+ W + R+ R+ + E+ K K S + R REG Sbjct: 396 PNYWI------------RYGGRQDENRVPSGVNVEGAEVHGFSMGK-KLSPKIDRDLREG 442 Query: 450 GPLLYEGISLTMNSKLLNGSQRVVMDGVISDHECQELQRLTNVAATSGDGYRGQTSPHTP 509 GPLLYE I+ NS+ LNG+QRV++D V+S+ +C+EL + + GDGYRG+TSPHTP Sbjct: 443 GPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTP 502 Query: 510 NEKFYGVTVFKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCR 569 NEKF G TV KALK G EG+VPL+SA L+Y+++EK RRI+ESYF L++ LYFSY+H+VCR Sbjct: 503 NEKFEGATVLKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCR 562 Query: 570 TAIEEVQAERKDDSHPVHVDNCILNAETLVCVKEPPAYTFRDYSAILYLNGDFDGGNFYF 629 TA+ Q R D SHP+H DNC+L+ E C KEPPAYTFRDYSA+LY+N DF+GG F F Sbjct: 563 TALSGQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIF 622 Query: 630 TELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTRGQRCAIALWFTLDP--RHSERVR 687 TE+DAKTVTA ++P+CGR + FSSG ENPHGVKAVT+G+RCA+ALWFTLDP R ER++ Sbjct: 623 TEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKGKRCAVALWFTLDPLYRELERIQ 682 Query: 688 A 688 A Sbjct: 683 A 683 >gi|28466983 leprecan-like 2 [Homo sapiens] Length = 736 Score = 550 bits (1418), Expect = e-156 Identities = 306/671 (45%), Positives = 401/671 (59%), Gaps = 45/671 (6%) Query: 35 PDLLFAEGTAAYARGDWPGVVLSMERALRSRAALRALRLRCRTQCAAD----FPWEL--- 87 PDLL+A+G AYA G W V + ALRS+AAL +RL C CAAD P L Sbjct: 37 PDLLYADGLRAYAAGAWAPAVALLREALRSQAALGRVRLDCGASCAADPGAALPAVLLGA 96 Query: 88 -DPDWSPSPAQASGAAALRDLSFFGGLLRRAACLRRC----LGPPAAHSLSEEMELE--F 140 +PD P P Q S L LRRA CL +C LGP A L L F Sbjct: 97 PEPDSGPGPTQGSWERQL-----LRAALRRADCLTQCAARRLGPGGAARLRVGSALRDAF 151 Query: 141 RKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDL 200 R+R PYNYLQ AY+++ KL+ A AAAHTFFV NP H++M++++ Y+ MSGV+ F+DL Sbjct: 152 RRREPYNYLQRAYYQLKKLDLAAAAAHTFFVANPMHLQMREDMAKYRRMSGVRPQSFRDL 211 Query: 201 ETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEY 260 ET PH + G+ L ++ A+P LE ALQ E CRA CEGP + G E Sbjct: 212 ETPPHWAAYDTGLELLGRQEAGLALPRLEEALQGSLAQMESCRADCEGPEEQQGAEEEED 271 Query: 261 NA----DLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIGN 316 A L++AI H+IQVL C+Q CV E A+ P R P DFLP+ L A+ +GN Sbjct: 272 GAASQGGLYEAIAGHWIQVLQCRQRCVGETATRPGRSFPVPDFLPNQLRRLHEAHAQVGN 331 Query: 317 YTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTRSIGPRESAKEYRQRSLLEKELL 376 +QA+E + LLF+P DE + L Y A LGE +GPRE + + RSL EK L Sbjct: 332 LSQAIENVLSVLLFYPEDEAAKRALNQYQAQLGEPRP-GLGPREDIQRFILRSLGEKRQL 390 Query: 377 FFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKT 436 ++A + G F DPD WTP +IP+ L+EK + ++E Sbjct: 391 YYAMEHLGTSFKDPDPWTPAALIPEALREKLREDQEK-------------------RPWD 431 Query: 437 KESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMDGVISDHECQELQRLTNVAATS 496 E + LT LL EG++LT +S+ LNGS+R V+DG+++ EC L +L AA + Sbjct: 432 HEPVKPKPLTYWKDVLLLEGVTLTQDSRQLNGSERAVLDGLLTPAECGVLLQLAKDAAGA 491 Query: 497 G--DGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFR 554 G GYRG+ SPHTP+E+F G+TV KA +L + G V Q A L V+E+VR + ++YF Sbjct: 492 GARSGYRGRRSPHTPHERFEGLTVLKAAQLARAGTVGSQGAKLLLEVSERVRTLTQAYFS 551 Query: 555 LDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNAETLVCVKEPPAYTFRDYSA 614 + PL+ S++HLVCR+AIE Q +R D SHPVH DNC+L+ +T C +EPPAYT+RDYS Sbjct: 552 PERPLHLSFTHLVCRSAIEGEQEQRMDLSHPVHADNCVLDPDTGECWREPPAYTYRDYSG 611 Query: 615 ILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTRGQRCAIAL 674 +LYLN DF GG+ +FTE +A TVTA V+P+CGR V FSSG ENPHGV AVTRG+RCA+AL Sbjct: 612 LLYLNDDFQGGDLFFTEPNALTVTARVRPRCGRLVAFSSGVENPHGVWAVTRGRRCALAL 671 Query: 675 WFTLDPRHSER 685 W T P H E+ Sbjct: 672 WHTWAPEHREQ 682 >gi|197313662 leprecan-like 1 isoform b [Homo sapiens] Length = 527 Score = 531 bits (1368), Expect = e-151 Identities = 263/515 (51%), Positives = 347/515 (67%), Gaps = 16/515 (3%) Query: 177 MEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYF 236 MEMQQN++ Y+ +GV+ D E +PHM+ + GV+ Y + + A+ H E AL+EYF Sbjct: 1 MEMQQNIENYRATAGVEALQLVDREAKPHMESYNAGVKHYEADDFEMAIRHFEQALREYF 60 Query: 237 VAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPF 296 V ECR LCEGP ++ Y YL Y A L++AI DHY+QVL C+ CV ELA+ P R P Sbjct: 61 VEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPGRLSPI 120 Query: 297 EDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGEE-HTRS 355 E+FLP HY+YLQFAYY +G Y +A+ECAK YLL P+DE + N+ YY ++L + S Sbjct: 121 ENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDDSIDPAS 180 Query: 356 IGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRLQEKQKSERETAV 415 I RE + +R LE EL+ A + G + +P+ W + R+ Sbjct: 181 IEAREDLTMFVKRHKLESELIKSAAEGLGFSYTEPNYWI------------RYGGRQDEN 228 Query: 416 RISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNSKLLNGSQRVVMD 475 R+ + E+ K K S + R REGGPLLYE I+ NS+ LNG+QRV++D Sbjct: 229 RVPSGVNVEGAEVHGFSMGK-KLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLD 287 Query: 476 GVISDHECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSA 535 V+S+ +C+EL + + GDGYRG+TSPHTPNEKF G TV KALK G EG+VPL+SA Sbjct: 288 NVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSA 347 Query: 536 HLYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHPVHVDNCILNA 595 L+Y+++EK RRI+ESYF L++ LYFSY+H+VCRTA+ Q R D SHP+H DNC+L+ Sbjct: 348 RLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRNDLSHPIHADNCLLDP 407 Query: 596 ETLVCVKEPPAYTFRDYSAILYLNGDFDGGNFYFTELDAKTVTAEVQPQCGRAVGFSSGT 655 E C KEPPAYTFRDYSA+LY+N DF+GG F FTE+DAKTVTA ++P+CGR + FSSG Sbjct: 408 EANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGG 467 Query: 656 ENPHGVKAVTRGQRCAIALWFTLDP--RHSERVRA 688 ENPHGVKAVT+G+RCA+ALWFTLDP R ER++A Sbjct: 468 ENPHGVKAVTKGKRCAVALWFTLDPLYRELERIQA 502 Score = 40.4 bits (93), Expect = 0.006 Identities = 14/44 (31%), Positives = 30/44 (68%) Query: 146 YNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTM 189 Y+YLQ AY+++ + KA+ A + + +P+ ++ N+DYY+++ Sbjct: 128 YDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESL 171 >gi|5453601 cartilage associated protein precursor [Homo sapiens] Length = 401 Score = 214 bits (545), Expect = 2e-55 Identities = 141/391 (36%), Positives = 203/391 (51%), Gaps = 36/391 (9%) Query: 4 RALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVL 56 R L LL V A A +A+ E + +L+ + Y+ W V Sbjct: 6 RGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVG 65 Query: 57 SMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRR 116 +E +LR LR C C+A +P P A+G A+ +L FGGLLRR Sbjct: 66 YLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFGGLLRR 115 Query: 117 AACLRRCL-GPPAAHSL--SEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGN 173 A CL+RC G PA S E+ +F++R PY +LQ AYFK N L KA+AAAHTF + + Sbjct: 116 AHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKH 175 Query: 174 PEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQ 233 P+ M++N+ YY+++ G ++ KDLET+ + F VR Y+ E + ++ +E AL Sbjct: 176 PDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDMELALP 234 Query: 234 EYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSRE 293 ++F A+ EC A CEG + + D + +I DHY++VL CK C L + Sbjct: 235 DFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENL-TPVIGG 287 Query: 294 KPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAM-----L 348 P E F+ + Y+YLQFAYY + + A CA +YLLF ND+VM QNL YY L Sbjct: 288 YPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGL 347 Query: 349 GEEHTRSIGPRESAKEYRQRSLLEKELLFFA 379 +EH + PR A ++ + L+KEL FA Sbjct: 348 SDEHFQ---PRPEAVQFFNVTTLQKELYDFA 375 >gi|5454038 synaptonemal complex protein SC65 [Homo sapiens] Length = 437 Score = 187 bits (476), Expect = 2e-47 Identities = 131/382 (34%), Positives = 182/382 (47%), Gaps = 28/382 (7%) Query: 12 LLAVVAAASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVLSMERALRSRA 66 LL ++ ++ A+ E + G DL+ + Y W +E ALR Sbjct: 8 LLWLLLGSAGAQYEKYSFRGFPPEDLMPLAAAYGHALEQYEGESWRESARYLEAALRLHR 67 Query: 67 ALRALRLRCRTQCAADFPW-ELDPDWSPSPAQASGAAALRDLSFFGGLLRRAACLRRCLG 125 LR C C+ P + DPD + A +L FG +L RAACLRRC Sbjct: 68 LLRDSEAFCHANCSGPAPAAKPDPDGGRADEWAC------ELRLFGRVLERAACLRRCKR 121 Query: 126 PPAAHSLS---EEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQN 182 A + ++ +F+ R PY YL A FK N+LEKAVAAA+TF NP+H + Sbjct: 122 TLPAFQVPYPPRQLLRDFQSRLPYQYLHYALFKANRLEKAVAAAYTFLQRNPKHELTAKY 181 Query: 183 LDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEEC 242 L+YYQ M V + DLE QP+ F V+LY+ + + +E AL EY + C Sbjct: 182 LNYYQGMLDVADESLTDLEAQPYEAVFLRAVKLYNSGDFRSSTEDMERALSEYLAVFARC 241 Query: 243 RALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFED-FLP 301 A CEG ++ + D + AI D + + L CK +C L P+ F D F+ Sbjct: 242 LAGCEGAHEQVDFK------DFYPAIADLFAESLQCKVDCEANLT--PNVGGYFVDKFVA 293 Query: 302 SHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYY---AAMLGEEHTRSIGP 358 + Y+YLQFAYY + + QA A +Y+LF P D VM QNL YY A G E P Sbjct: 294 TMYHYLQFAYYKLNDVRQAARSAASYMLFDPKDSVMQQNLVYYRFHRARWGLEE-EDFQP 352 Query: 359 RESAKEYRQRSLLEKELLFFAY 380 RE A Y ++ +ELL F + Sbjct: 353 REEAMLYHNQTAELRELLEFTH 374 >gi|239753578 PREDICTED: similar to cartilage associated protein [Homo sapiens] Length = 241 Score = 74.7 bits (182), Expect = 3e-13 Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 20/168 (11%) Query: 4 RALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLL-----FAEGTAAYARGDWPGVVL 56 R L LL V A A +A+ E + +L+ + Y+ W V Sbjct: 6 RGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVG 65 Query: 57 SMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFGGLLRR 116 +E +LR LR C C+A +P P A+G A+ +L FGGLLRR Sbjct: 66 YLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFGGLLRR 115 Query: 117 AACLRRC-LGPPAAHSL--SEEMELEFRKRSPYNYLQVAYFKINKLEK 161 A CL+RC G PA S E+ +F++R PY +LQ AYFK N L K Sbjct: 116 AHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPK 163 Score = 33.1 bits (74), Expect = 0.89 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 5/121 (4%) Query: 201 ETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEE---CRALCEG-PYDYDGYN 256 E P +R + YS E E+V +LE +L+ + + + C C P Sbjct: 40 ELMPLESAYRHALDKYSGEHWAESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAG 99 Query: 257 YLEY-NADLFQAITDHYIQVLNCKQNCVTELASHPSREKPFEDFLPSHYNYLQFAYYNIG 315 Y LF + + CKQ S PSRE + Y +LQFAY+ Sbjct: 100 LASYPELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKAN 159 Query: 316 N 316 N Sbjct: 160 N 160 >gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] Length = 319 Score = 57.0 bits (136), Expect = 6e-08 Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 28/153 (18%) Query: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592 LY V +KV+ + F + S HL T + + +H HVD Sbjct: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234 Query: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649 Y DY+++LYL+ DF GG F F E A V+P+ GR Sbjct: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278 Query: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRH 682 F+SG+EN H V+ V G R AI + F+ +P H Sbjct: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDH 311 >gi|33589818 prolyl 4-hydroxylase, alpha III subunit precursor [Homo sapiens] Length = 544 Score = 37.0 bits (84), Expect = 0.062 Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 297 EDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAMLGE 350 E L ++L FAY+ GN + A+ ++ +LL+ P+++ M +N+ Y +L E Sbjct: 223 EASLEDALDHLAFAYFRAGNVSCALSLSREFLLYSPDNKRMARNVLKYERLLAE 276 >gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] Length = 857 Score = 35.0 bits (79), Expect = 0.24 Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%) Query: 396 EEVIPKRLQEKQK--SERETAVRISQEIGNLMKEIETLVEEKTKES 439 EE+I K QEK++ ++RE A+ +++++ KEI+TL+ KT +S Sbjct: 194 EELIAKSKQEKRERQAQREDALELTEKLDQDWKEIQTLLSHKTPKS 239 >gi|13489073 egl nine homolog 1 [Homo sapiens] Length = 426 Score = 34.7 bits (78), Expect = 0.31 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Query: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 R + I YLN D+D G + K A+++P+ R + F S NPH V+ Sbjct: 322 RCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQP-AY 380 Query: 667 GQRCAIALW-FTLDPRHSERVRAARAGQG 694 R AI +W F D R +V+ +G Sbjct: 381 ATRYAITVWYFDADERARAKVKYLTGEKG 409 >gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens] Length = 1758 Score = 32.7 bits (73), Expect = 1.2 Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 409 SERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449 SE +V+ + GN+ K+++ + EK KESLD + + + G Sbjct: 1612 SESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVG 1652 >gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens] Length = 1792 Score = 32.7 bits (73), Expect = 1.2 Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 409 SERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREG 449 SE +V+ + GN+ K+++ + EK KESLD + + + G Sbjct: 1646 SESNVSVKEEESSGNISKDLKDKIVEKAKESLDTAAVVQVG 1686 >gi|47519562 reticulon 4 isoform E [Homo sapiens] Length = 986 Score = 31.6 bits (70), Expect = 2.6 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 18/129 (13%) Query: 338 NQNLAYYAAMLGEEHTRSIGPRESAKEYRQRS---LLEKELLFFA---YDVFGIPF-VDP 390 ++ L + +L E T E++KE +++ L++++L F+ Y G F V P Sbjct: 43 HEYLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSP 102 Query: 391 DSWTP-------EEVIPKRLQEKQKSERETAVRISQEIGN----LMKEIETLVEEKTKES 439 + + EE+I K E++K + QE+ L+KE E + EK K+S Sbjct: 103 KAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAKDS 162 Query: 440 LDVSRLTRE 448 + R+ E Sbjct: 163 FNEKRVAVE 171 >gi|24431935 reticulon 4 isoform A [Homo sapiens] Length = 1192 Score = 31.6 bits (70), Expect = 2.6 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 18/129 (13%) Query: 338 NQNLAYYAAMLGEEHTRSIGPRESAKEYRQRS---LLEKELLFFA---YDVFGIPF-VDP 390 ++ L + +L E T E++KE +++ L++++L F+ Y G F V P Sbjct: 249 HEYLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSP 308 Query: 391 DSWTP-------EEVIPKRLQEKQKSERETAVRISQEIGN----LMKEIETLVEEKTKES 439 + + EE+I K E++K + QE+ L+KE E + EK K+S Sbjct: 309 KAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAKDS 368 Query: 440 LDVSRLTRE 448 + R+ E Sbjct: 369 FNEKRVAVE 377 >gi|56549696 E1A binding protein p400 [Homo sapiens] Length = 3122 Score = 31.6 bits (70), Expect = 2.6 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 11/105 (10%) Query: 404 QEKQKSERETAVRISQEIGNLMKEIETLVE--------EKTKESLDVSRLTREGGPLLYE 455 +E+Q R A ++EI IE +VE EK K++L++ +++R G L + Sbjct: 823 KEEQSRLRRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPK 882 Query: 456 GISLTMNSKL---LNGSQRVVMDGVISDHECQELQRLTNVAATSG 497 G S L ++G +R + D E + + A G Sbjct: 883 GFDALQESSLDSGMSGRKRKASISLTDDEVDDEEETIEEEEANEG 927 >gi|83921609 hypothetical protein LOC127254 [Homo sapiens] Length = 1530 Score = 31.6 bits (70), Expect = 2.6 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 396 EEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKE 438 E VIPKR + K+ +A +QEI +KE+ T VEE T + Sbjct: 436 EYVIPKRNEIKENKTSVSAKFSAQEIKTGLKEVVTAVEEMTSK 478 >gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] Length = 407 Score = 31.2 bits (69), Expect = 3.4 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Query: 610 RDYSAILYLNGDFD---GGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 R + I YLN ++D G + + V A ++P R + F S NPH VK Sbjct: 306 RCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKP-AY 364 Query: 667 GQRCAIALWF 676 R AI +W+ Sbjct: 365 ATRYAITVWY 374 >gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] Length = 407 Score = 31.2 bits (69), Expect = 3.4 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Query: 610 RDYSAILYLNGDFD---GGNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 R + I YLN ++D G + + V A ++P R + F S NPH VK Sbjct: 306 RCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKP-AY 364 Query: 667 GQRCAIALWF 676 R AI +W+ Sbjct: 365 ATRYAITVWY 374 >gi|63252886 prolyl 4-hydroxylase, alpha I subunit isoform 1 precursor [Homo sapiens] Length = 534 Score = 30.8 bits (68), Expect = 4.4 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%) Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201 K S +YL A ++ L+KA+ +PEH NL Y++ + KE D Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262 Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248 + ++ Q+ P + +Y ++ LC G Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295 >gi|217272851 prolyl 4-hydroxylase, alpha I subunit isoform 3 precursor [Homo sapiens] Length = 516 Score = 30.8 bits (68), Expect = 4.4 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%) Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201 K S +YL A ++ L+KA+ +PEH NL Y++ + KE D Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262 Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248 + ++ Q+ P + +Y ++ LC G Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295 >gi|217272849 prolyl 4-hydroxylase, alpha I subunit isoform 2 precursor [Homo sapiens] Length = 534 Score = 30.8 bits (68), Expect = 4.4 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%) Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201 K S +YL A ++ L+KA+ +PEH NL Y++ + KE D Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262 Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248 + ++ Q+ P + +Y ++ LC G Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295 >gi|63252888 prolyl 4-hydroxylase, alpha I subunit isoform 2 precursor [Homo sapiens] Length = 534 Score = 30.8 bits (68), Expect = 4.4 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%) Query: 142 KRSPYNYLQVAYFKINKLEKAVAAAHTFFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLE 201 K S +YL A ++ L+KA+ +PEH NL Y++ + KE D Sbjct: 204 KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM-AKEKDVNKSA 262 Query: 202 TQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQEYFVAYEECRALCEG 248 + ++ Q+ P + +Y ++ LC G Sbjct: 263 S--------------DDQSDQKTTPKKKGVAVDYLPERQKYEMLCRG 295 >gi|11545787 egl nine homolog 3 [Homo sapiens] Length = 239 Score = 30.4 bits (67), Expect = 5.8 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 R + I YLN ++D G + K+ A+V+P R + F S NPH V+ + Sbjct: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202 Query: 667 GQRCAIALWF 676 R A+ +W+ Sbjct: 203 ATRYAMTVWY 212 >gi|9789865 eukaryotic translation initiation factor 4E nuclear import factor 1 [Homo sapiens] Length = 985 Score = 30.4 bits (67), Expect = 5.8 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 392 SWTPEEVIPKRLQEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGP 451 S+TP VI K + K+KS+ E A +G+ ++ + EE S V R+ P Sbjct: 695 SFTPTSVIRKMYESKEKSKEEPASG-KAALGDSKEDTQKASEENLLSSSSVPSADRDSSP 753 Query: 452 LLYEGISLTMNSKL 465 T NSKL Sbjct: 754 --------TTNSKL 759 >gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens] Length = 783 Score = 30.0 bits (66), Expect = 7.6 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%) Query: 171 VGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQ-------- 222 VGNP + Q Y+ ++ ++ F + +TQPH E+ + E+PQ Sbjct: 492 VGNPGSVLTQ----YWSLLNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIEN 547 Query: 223 --EAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQV 275 AVP ++ +E + +E C + + +LE N D I D+Y +V Sbjct: 548 KKAAVPQIKNENKEIHCSDDE-NTPCHIKQIFT-HPHLELNPDFHPKIKDYYCEV 600 >gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] Length = 1026 Score = 30.0 bits (66), Expect = 7.6 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%) Query: 171 VGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQ-------- 222 VGNP + Q Y+ ++ ++ F + +TQPH E+ + E+PQ Sbjct: 492 VGNPGSVLTQ----YWSLLNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIEN 547 Query: 223 --EAVPHLEAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQV 275 AVP ++ +E + +E C + + +LE N D I D+Y +V Sbjct: 548 KKAAVPQIKNENKEIHCSDDE-NTPCHIKQIFT-HPHLELNPDFHPKIKDYYCEV 600 >gi|5729734 activator of S phase kinase [Homo sapiens] Length = 674 Score = 29.6 bits (65), Expect = 9.9 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 175 EHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHLEAALQE 234 EH+ +Q ++ E DFK++++ P + R + + + P+ E + Sbjct: 541 EHLTVQAKAPFHTPPEEPNECDFKNMDSLPSGKIHRKVKIILGRNRKENLEPNAEFDKRT 600 Query: 235 YFVAYEECRALCEGP 249 F+ EE R +C P Sbjct: 601 EFITQEENR-ICSSP 614 >gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens] Length = 356 Score = 29.6 bits (65), Expect = 9.9 Identities = 13/23 (56%), Positives = 17/23 (73%) Query: 480 DHECQELQRLTNVAATSGDGYRG 502 +H+ Q ++RLT AATSG G RG Sbjct: 233 EHKNQTIERLTKTAATSGRGGRG 255 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,384,987 Number of Sequences: 37866 Number of extensions: 1187149 Number of successful extensions: 3533 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 3478 Number of HSP's gapped (non-prelim): 43 length of query: 697 length of database: 18,247,518 effective HSP length: 109 effective length of query: 588 effective length of database: 14,120,124 effective search space: 8302632912 effective search space used: 8302632912 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.