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Search of human proteins with 224994197
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224994197 prominin 1 isoform 5 [Homo sapiens]
(833 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224994197 prominin 1 isoform 5 [Homo sapiens] 1667 0.0
gi|224994193 prominin 1 isoform 7 [Homo sapiens] 1659 0.0
gi|224994189 prominin 1 isoform 2 [Homo sapiens] 1657 0.0
gi|224994191 prominin 1 isoform 2 [Homo sapiens] 1657 0.0
gi|5174387 prominin 1 isoform 1 [Homo sapiens] 1650 0.0
gi|224994199 prominin 1 isoform 4 [Homo sapiens] 1644 0.0
gi|224994195 prominin 1 isoform 6 [Homo sapiens] 1636 0.0
gi|21389623 prominin 2 [Homo sapiens] 357 3e-98
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 46 2e-04
gi|45269141 multimerin 1 [Homo sapiens] 42 0.003
gi|9910266 kinesin family member 15 [Homo sapiens] 39 0.015
gi|7662160 hypothetical protein LOC9813 [Homo sapiens] 39 0.020
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 39 0.020
gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens] 37 0.099
gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens] 37 0.099
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 36 0.13
gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens] 35 0.22
gi|55770834 centromere protein F [Homo sapiens] 35 0.22
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 35 0.38
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 35 0.38
gi|94538345 keratin 35 [Homo sapiens] 35 0.38
gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens] 34 0.49
gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens] 34 0.49
gi|53988385 tweety 2 isoform 1 [Homo sapiens] 34 0.64
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 34 0.64
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 32 2.4
gi|169218008 PREDICTED: similar to anaphase-promoting complex su... 32 2.4
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 32 2.4
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 32 2.4
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 32 2.4
>gi|224994197 prominin 1 isoform 5 [Homo sapiens]
Length = 833
Score = 1667 bits (4316), Expect = 0.0
Identities = 833/833 (100%), Positives = 833/833 (100%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
Query: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR
Sbjct: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
Query: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI
Sbjct: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
Query: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV
Sbjct: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
Query: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD
Sbjct: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
Query: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE
Sbjct: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
Query: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL
Sbjct: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
Query: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK
Sbjct: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
Query: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL
Sbjct: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
Query: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS
Sbjct: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
Query: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN
Sbjct: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
Query: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID
Sbjct: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
Query: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPSQH 833
PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPSQH
Sbjct: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPSQH 833
>gi|224994193 prominin 1 isoform 7 [Homo sapiens]
Length = 842
Score = 1659 bits (4296), Expect = 0.0
Identities = 833/842 (98%), Positives = 833/842 (98%), Gaps = 9/842 (1%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK IVYYEAGIILCCVLGLLFI
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
Query: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171
ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
Query: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231
HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
Query: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291
ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
Query: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351
SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
Query: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411
YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
Query: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471
HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
Query: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531
VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
Query: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591
YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
Query: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651
LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
Query: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711
LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
Query: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771
DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
Query: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPS 831
VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPS
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPS 840
Query: 832 QH 833
QH
Sbjct: 841 QH 842
>gi|224994189 prominin 1 isoform 2 [Homo sapiens]
Length = 856
Score = 1657 bits (4292), Expect = 0.0
Identities = 829/829 (100%), Positives = 829/829 (100%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
Query: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR
Sbjct: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
Query: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI
Sbjct: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
Query: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV
Sbjct: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
Query: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD
Sbjct: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
Query: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE
Sbjct: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
Query: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL
Sbjct: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
Query: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK
Sbjct: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
Query: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL
Sbjct: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
Query: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS
Sbjct: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
Query: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN
Sbjct: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
Query: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID
Sbjct: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
Query: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829
PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN
Sbjct: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829
>gi|224994191 prominin 1 isoform 2 [Homo sapiens]
Length = 856
Score = 1657 bits (4292), Expect = 0.0
Identities = 829/829 (100%), Positives = 829/829 (100%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
Query: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR
Sbjct: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
Query: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI
Sbjct: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
Query: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV
Sbjct: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
Query: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD
Sbjct: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
Query: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE
Sbjct: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
Query: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL
Sbjct: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
Query: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK
Sbjct: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
Query: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL
Sbjct: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
Query: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS
Sbjct: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
Query: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN
Sbjct: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
Query: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID
Sbjct: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
Query: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829
PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN
Sbjct: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829
>gi|5174387 prominin 1 isoform 1 [Homo sapiens]
Length = 865
Score = 1650 bits (4272), Expect = 0.0
Identities = 829/838 (98%), Positives = 829/838 (98%), Gaps = 9/838 (1%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK IVYYEAGIILCCVLGLLFI
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
Query: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171
ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
Query: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231
HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
Query: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291
ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
Query: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351
SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
Query: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411
YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
Query: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471
HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
Query: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531
VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
Query: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591
YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
Query: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651
LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
Query: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711
LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
Query: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771
DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
Query: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829
VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 838
>gi|224994199 prominin 1 isoform 4 [Homo sapiens]
Length = 825
Score = 1644 bits (4256), Expect = 0.0
Identities = 825/833 (99%), Positives = 825/833 (99%), Gaps = 8/833 (0%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYF 120
Query: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR
Sbjct: 121 FCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKR 180
Query: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI
Sbjct: 181 SRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNI 240
Query: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV
Sbjct: 241 IPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLV 300
Query: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD
Sbjct: 301 HPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
Query: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE
Sbjct: 361 RVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYIHRNLPTLEE 420
Query: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL
Sbjct: 421 YDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGL 480
Query: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK
Sbjct: 481 SFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEYYLSGKLFNK 540
Query: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL
Sbjct: 541 SKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELESLKVNLNIFL 600
Query: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS
Sbjct: 601 LGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNS 660
Query: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN
Sbjct: 661 LKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITN 720
Query: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID
Sbjct: 721 NTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIID 780
Query: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPSQH 833
PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD PSQH
Sbjct: 781 PLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD--------PSQH 825
>gi|224994195 prominin 1 isoform 6 [Homo sapiens]
Length = 834
Score = 1636 bits (4236), Expect = 0.0
Identities = 825/842 (97%), Positives = 825/842 (97%), Gaps = 17/842 (2%)
Query: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1 MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
Query: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111
IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK IVYYEAGIILCCVLGLLFI
Sbjct: 61 IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
Query: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171
ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
Query: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231
HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
Query: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291
ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
Query: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351
SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
Query: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411
YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
Query: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471
HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
Query: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531
VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
Query: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591
YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
Query: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651
LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
Query: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711
LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
Query: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771
DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
Query: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNPS 831
VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD PS
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD--------PS 832
Query: 832 QH 833
QH
Sbjct: 833 QH 834
>gi|21389623 prominin 2 [Homo sapiens]
Length = 834
Score = 357 bits (916), Expect = 3e-98
Identities = 205/763 (26%), Positives = 387/763 (50%), Gaps = 14/763 (1%)
Query: 50 GPIGILFELVHIFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKIVYYEAGIILCCVLGLL 109
G + L+ V FL VVQ FP + ++ L + K++ ++V YEAG ++C V+ L
Sbjct: 58 GLLDSLYGTVRRFLSVVQLNPFPSELVKALLNELASVKVN--EVVRYEAGYVVCAVIAGL 115
Query: 110 FIILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFV 169
+++L+P G FC CRC +CGG + K R + LL+ +++ IG+ FV
Sbjct: 116 YLLLVPTAGLCFCCCRCHRRCGGRVKTEHKALA-CERAALMVFLLLTTLLLLIGVVCAFV 174
Query: 170 ANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLG 229
N + ++ S + L L+++ P++++ + Q++ +++ +L+ + +G
Sbjct: 175 TNQRTHEQMGPSIEAMPETLLSLWGLVSDVPQELQAVAQQFSLPQEQVSEELDGVGVSIG 234
Query: 230 GGILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSL 289
I +LR ++ P+L + S+ ++ + L+ +N+T+ L L ++ + L
Sbjct: 235 SAIHTQLRSSVYPLLAAVGSLGQVLQVSVHHLQTLNATVVELQAGQQDLEPAIREHRDRL 294
Query: 290 RSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQ 349
L + C C L + Q+P VD L + V + +VQ
Sbjct: 295 LELLQEARC-----QGDCAGALSWARTLELGADFSQVPSVDHVLHQLKGVPEANFSSMVQ 349
Query: 350 QGYQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTES 409
+ + N +P QT++VV +K+ + + + + P + S ++ + E
Sbjct: 350 EENSTFNALPALAAMQTSSVVQELKKAVAQQPEGVRTLAEGFPGLEAASRWAQALQEVEE 409
Query: 410 YIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNT 469
L ++ Y++Y W+ G V+CS++ +V+ LGL G+ G P+
Sbjct: 410 SSRPYLQEVQRYETYRWIVGCVLCSVVLFVVLCNLLGLNLGIWGLSARDDPSHPEAKGEA 469
Query: 470 GGVFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDW 529
G FLM GVGLSFLF L+++V TF+ G NV+ L+C + + ELF DTP L
Sbjct: 470 GARFLMAGVGLSFLFAAPLILLVFATFLVGGNVQTLVCRSWENGELFEFADTPGNLPPSM 529
Query: 530 EYYLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSEL 589
+L K ++ Q Y CK+ + L L +S+++ EHL+IN++T + EL
Sbjct: 530 NL---SQLLGLRK-NISIHQAYQQCKEGAALWTVLQLNDSYDLEEHLDINQYTNKLRQEL 585
Query: 590 ESLKVNL-NIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAK 648
+SLKV+ ++ LL +A R++L+ + G+ R++Y +L Q + ++ A +L+
Sbjct: 586 QSLKVDTQSLDLLSSAARRDLEALQSSGLQRIHYPDFLVQIQRPVVKTSMEQLAQELQGL 645
Query: 649 ANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRIL 708
A + L L+ +AQ ++ +HQ++V+P + ++ L SV+ L+ + L + +L
Sbjct: 646 AQAQDNSVLGQRLQEEAQGLRNLHQEKVVPQQSLVAKLNLSVRALESSAPNLQLETSDVL 705
Query: 709 ASLDFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDT 768
A++ + + + + ++ ++ + +GYF Y+ W+ +++++A+C+P++ ALD
Sbjct: 706 ANVTYLKGELPAWAARILRNVSECFLAREMGYFSQYVAWVREEVTQRIATCQPLSGALDN 765
Query: 769 AVDVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYR 811
+ V LC + DP N FWF + T FL+P++IFAVK +KY+R
Sbjct: 766 S-RVILCDMMADPWNAFWFCLAWCTFFLIPSIIFAVKTSKYFR 807
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 45.8 bits (107), Expect = 2e-04
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 246 EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSE 305
E+K+ I K+ E M +++L + TQL + L V+ L+ ++ C + S E
Sbjct: 540 ELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEE 599
Query: 306 TCNSIRLSLSQLN--------SNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLND 357
CN++R + N N L++ +++ NV + L+ ++ Q +
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGE 659
Query: 358 IPDRVQRQ 365
I D Q++
Sbjct: 660 ITDTYQKE 667
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 178 IKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAF--TDLNSINSVLGGGILDR 235
I R KL SNF+ + + NET Q++ + ++K T ++ I +
Sbjct: 809 IPRDEKLNQSNFQKMYQMFNETTSQVRKYQQNMSHLEEKLLLTTKISKNFETRLQDIESK 868
Query: 236 LRPNIIPVLDEIKSMATAIKETKEA--LENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSL 293
+ +IP +K + E +A L+ +NS K+L +S LS + SL +L
Sbjct: 869 VTQTLIPYYISVKKGSVVTNERDQALQLQVLNSRFKALEAKSIHLSINF----FSLNKTL 924
Query: 294 NDPLCLVHPSSETCNSIRLSLSQ--LNSNPELRQL 326
++ L + H +S + + + ++ + +S P+++ L
Sbjct: 925 HEVLTMCHNASTSVSELNATIPKWIKHSLPDIQLL 959
>gi|9910266 kinesin family member 15 [Homo sapiens]
Length = 1388
Score = 39.3 bits (90), Expect = 0.015
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 178 IKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKD--KAFTDLNSINSVLGGGILDR 235
IKR ++ +D N D + L NE E IK LA+ ++ K DL + S L ++
Sbjct: 1225 IKRQKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMEC 1284
Query: 236 LRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 286
LR + DE++ T + + E + S L+ ++++ + S + ++
Sbjct: 1285 LR-----MTDEVERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLR 1330
>gi|7662160 hypothetical protein LOC9813 [Homo sapiens]
Length = 495
Score = 38.9 bits (89), Expect = 0.020
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 34/264 (12%)
Query: 142 GPFLRKC------FAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSN----FKD 191
G +LR C +L C++ +G+ + VA + +K + +SN F++
Sbjct: 63 GDYLRCCKICYPLCGFVILAACVVACVGLVWMQVALKEDLDALKEKFRTMESNQKSSFQE 122
Query: 192 LRTLLNETPEQIKYI--LAQYNTTKDKAFTDLNSINSVLG--GGILDRLRPNIIPVLDEI 247
+ L E + K + + +K + ++ +N + ++ L+ N+ D I
Sbjct: 123 IPKLNEELLSKQKQLEKIESGEMGLNKVWINITEMNKQISLLTSAVNHLKANVKSAADLI 182
Query: 248 KSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTS---LRSSLNDPLCLVHPSS 304
S+ T ++ ++++ ++ +TL S+H L ++ K + L+S +N P S
Sbjct: 183 -SLPTTVEGLQKSVASIGNTLNSVHLAVEALQKTVDEHKKTMELLQSDMNQHFLKETPGS 241
Query: 305 ETCNSIRLSLSQLNSNPELRQLPP----VDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 360
+ S+L++ L + L+ VN+ L GYQ ND+
Sbjct: 242 NQIIPSPSATSELDNKTHSENLKQDILYLHNSLEEVNSAL---------VGYQRQNDLKL 292
Query: 361 RVQRQTTTVVAGIKRVLNSIGSDI 384
+T V+ + + +N I SD+
Sbjct: 293 EGMNET---VSNLTQRVNLIESDV 313
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 38.9 bits (89), Expect = 0.020
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 233 LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQ-----STQLSSSLTSVKT 287
+D LRP +IPVL+E K+ A + + KE ++N+ S L L ++ +L S +++++
Sbjct: 140 MDELRP-LIPVLEEYKADAKLVLQFKEEVQNLTSVLNELQEEIGAYDYDELQSRVSNLEE 198
Query: 288 SLRSSLNDPLC 298
LR+ + C
Sbjct: 199 RLRACMQKLAC 209
>gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens]
Length = 757
Score = 36.6 bits (83), Expect = 0.099
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 133 EMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDL 192
E+ +RQ +G L KC ++L VI I + G FYG + Q++ R + RK+ + D+
Sbjct: 205 ELSKRQFSSG--LNKCVILAL-VIAISMGFGHFYGTI---QIQKRQQLVRKIHEDELNDM 258
Query: 193 RTLLNETPEQ----IKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIK 248
+ L++ ++ I Y + N + T+ ++ + + N+ E +
Sbjct: 259 KDYLSQCQQEQESFIDYKSLKENLARCWTLTEAEKMS-------FETQKTNL---ATENQ 308
Query: 249 SMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 286
+ ++++ ++AL ++ L L +Q L TS +
Sbjct: 309 YLRVSLEKEEKALSSLQEELNKLREQIRILEDKGTSTE 346
>gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens]
Length = 757
Score = 36.6 bits (83), Expect = 0.099
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 133 EMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDL 192
E+ +RQ +G L KC ++L VI I + G FYG + Q++ R + RK+ + D+
Sbjct: 205 ELSKRQFSSG--LNKCVILAL-VIAISMGFGHFYGTI---QIQKRQQLVRKIHEDELNDM 258
Query: 193 RTLLNETPEQ----IKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIK 248
+ L++ ++ I Y + N + T+ ++ + + N+ E +
Sbjct: 259 KDYLSQCQQEQESFIDYKSLKENLARCWTLTEAEKMS-------FETQKTNL---ATENQ 308
Query: 249 SMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 286
+ ++++ ++AL ++ L L +Q L TS +
Sbjct: 309 YLRVSLEKEEKALSSLQEELNKLREQIRILEDKGTSTE 346
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 36.2 bits (82), Expect = 0.13
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 405 NNTESYIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRG 464
+ + YI R PT ++ +Y+ + IC LL L +FY +G C RH P R
Sbjct: 171 HTVDCYISR--PTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRE 228
Query: 465 CVSNT 469
C+ +T
Sbjct: 229 CLPDT 233
>gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens]
Length = 915
Score = 35.4 bits (80), Expect = 0.22
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 14/182 (7%)
Query: 171 NHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGG 230
+H V + + L + R + E +K + +Y K SI VLG
Sbjct: 703 DHLVEEKASLQKSLLYYESQHGRPVTKEERHIVKPLYDRYRLVKQ--MLTRASITPVLGS 760
Query: 231 GILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSL 289
R + P+++ E IKE +E N++S L + + + Q+ SSL + ++ +
Sbjct: 761 PSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSSLENSESDV 820
Query: 290 RSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVLRTDLDGLV 348
+ + L L +RLS S+ S PE L QL AE + LR +
Sbjct: 821 EEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTLREFEEAFY 870
Query: 349 QQ 350
QQ
Sbjct: 871 QQ 872
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.4 bits (80), Expect = 0.22
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 236 LRPNIIPVLDEIKSMATAIKETKEA---LENMNSTLKSLHQQSTQ--------LSSSLTS 284
L +++ + E +++ +++ +E LE +NS+ +++ Q+ Q S+++
Sbjct: 2383 LELDVVTIRSEKENLTNELQKEQERISELEIINSSFENILQEKEQEKVQMKEKSSTAMEM 2442
Query: 285 VKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNN---VLR 341
++T L+ LN+ + +H E C + +LS EL + + LD N VL+
Sbjct: 2443 LQTQLKE-LNERVAALHNDQEACKAKEQNLSSQVECLELEKAQLLQG-LDEAKNNYIVLQ 2500
Query: 342 TDLDGLVQQ---GYQSLNDIPDRVQR 364
+ ++GL+Q+ G Q L + + R
Sbjct: 2501 SSVNGLIQEVEDGKQKLEKKDEEISR 2526
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 34.7 bits (78), Expect = 0.38
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 193 RTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMAT 252
R L+ + EQI+++ + N K + ++ +L + + E++S+
Sbjct: 711 RKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQR------RQQLEEQTVELSTEVQSLYR 764
Query: 253 AIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLND 295
IK+ KE + + +TL+ Q+ +L + + + LND
Sbjct: 765 EIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLND 807
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 34.7 bits (78), Expect = 0.38
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 193 RTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMAT 252
R L+ + EQI+++ + N K + ++ +L + + E++S+
Sbjct: 850 RKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQR------RQQLEEQTVELSTEVQSLYR 903
Query: 253 AIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLND 295
IK+ KE + + +TL+ Q+ +L + + + LND
Sbjct: 904 EIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLND 946
>gi|94538345 keratin 35 [Homo sapiens]
Length = 455
Score = 34.7 bits (78), Expect = 0.38
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 4/130 (3%)
Query: 256 ETKEALENM-NSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSL 314
ET+ +L + S + L + L+ + ++ + S + LCL E NS+R L
Sbjct: 187 ETEVSLRQLVESDINGLRRILDDLTLCKSDLEAQVESLKEELLCLKKNHEEEVNSLRCQL 246
Query: 315 SQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAGIK 374
N E+ PPVD L+ V +R + LV+ + D D + V
Sbjct: 247 GD-RLNVEVDAAPPVD--LNRVLEEMRCQYETLVENNRRDAEDWLDTQSEELNQQVVSSS 303
Query: 375 RVLNSIGSDI 384
L S ++I
Sbjct: 304 EQLQSCQAEI 313
>gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens]
Length = 791
Score = 34.3 bits (77), Expect = 0.49
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 223 SINSVLGGGILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSS 281
SI VLG R + P+++ E IKE +E N++S L + + + Q+ SS
Sbjct: 629 SITPVLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSS 688
Query: 282 LTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVL 340
L + ++ + + + L L +RLS S+ S PE L QL AE + L
Sbjct: 689 LENSESDVEEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTL 738
Query: 341 RTDLDGLVQQ 350
R + QQ
Sbjct: 739 REFEEAFYQQ 748
>gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]
Length = 887
Score = 34.3 bits (77), Expect = 0.49
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 223 SINSVLGGGILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSS 281
SI VLG R + P+++ E IKE +E N++S L + + + Q+ SS
Sbjct: 725 SITPVLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSS 784
Query: 282 LTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVL 340
L + ++ + + + L L +RLS S+ S PE L QL AE + L
Sbjct: 785 LENSESDVEEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTL 834
Query: 341 RTDLDGLVQQ 350
R + QQ
Sbjct: 835 REFEEAFYQQ 844
>gi|53988385 tweety 2 isoform 1 [Homo sapiens]
Length = 534
Score = 33.9 bits (76), Expect = 0.64
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 99 GIILCCVLGLLFIILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICI 158
G++ LGL I L V Y C C C + Q ++ + + ++ L+ C
Sbjct: 49 GLVAAVCLGLNLIFL---VAYLVCACHCRR---DDAVQTKQHHSCCITWTAVVAGLICCA 102
Query: 159 IISIGIFYGFVANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQY 210
+ +G FYG + ++ S A+ F + L++ T +++K L Q+
Sbjct: 103 AVGVG-FYGNSETNDGAYQLMYSLDDANHTFSGIDALVSGTTQKMKVDLEQH 153
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.9 bits (76), Expect = 0.64
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 569 SFNISEHL-NINEHTGSISSELESLKVNLNIFLLGAAGRKNL--QDFAACGIDRMNYDSY 625
SF+++E + +NE S+ E+++LK LN+ +K +D + NYD
Sbjct: 907 SFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRAEEAKKEQVEEDNEVSSGLKQNYDE- 965
Query: 626 LAQTGKSPAG---VNLLSFAYDLEAKANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQS 682
SPAG L +DL K N L+ +L + + QRV +E+
Sbjct: 966 -----MSPAGQISKEELQHEFDLLKKENEQRKRKLQAALINRKELL-----QRVSRLEEE 1015
Query: 683 LSTLYQSVK---ILQRTGNGLLERVTRILASLDFAQNFITNNTSSVIIEETKKYGRTIIG 739
L+ L K L T G +E + ++++ +T+ +E + Y + I
Sbjct: 1016 LANLKDESKKEIPLSETERGEVEEDKE---NKEYSEKCVTSK-----CQEIEIYLKQTIS 1067
Query: 740 YFEHYLQWIEFSISEKVAS 758
E LQ I + EK+A+
Sbjct: 1068 EKEVELQHIRKDLEEKLAA 1086
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 32.0 bits (71), Expect = 2.4
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 243 VLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPL----- 297
+L E S ++E ++++ N +KS H TQ S LTS LR+S D +
Sbjct: 1396 MLQETVSKEAELREKLCSIQSENMMMKSEH---TQTVSQLTSQNEVLRNSFRDQVRHLQE 1452
Query: 298 ---CLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDL 344
V + + + L QL + P R L N+ TDL
Sbjct: 1453 EHRKTVETLQQQLSKMEAQLFQLKNEPTTRSPVSSQQSLKNLRERRNTDL 1502
>gi|169218008 PREDICTED: similar to anaphase-promoting complex
subunit 2 [Homo sapiens]
Length = 430
Score = 32.0 bits (71), Expect = 2.4
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 247 IKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSET 306
I+ + + +++++ A+E++ L +++ Q L S+K +L + L +HP T
Sbjct: 118 IEELFSIVRDSRPAIEDLKYCL----ERTDQRQQLLVSLKAALETRL------LHPGVNT 167
Query: 307 CNSIRLSLSQLNSNPELRQLPP----VDAELDNVNNVLRTDLDGLVQ 349
C+ I L +S + + LR L P ++ + + LRT D + Q
Sbjct: 168 CDIITLYISAIKA---LRVLDPSMVILEVACEPIRRYLRTREDTVRQ 211
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 173 QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 232
Q + ++ +K ++ ++L++ ++ A+ N DK N + SV G +
Sbjct: 1245 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1295
Query: 233 LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 292
L+ I + ++ S+++ +++T+E L+ T + L+ ST+L L + SL+
Sbjct: 1296 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1351
Query: 293 LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 350
L++ + +++ + LS +S +L+ L+ + +++ L QQ
Sbjct: 1352 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1409
Query: 351 ----GYQSLNDIPDRVQRQTTTVVAGI 373
Y L +R+Q++ +V +
Sbjct: 1410 EKAAAYDKLEKTKNRLQQELDDLVVDL 1436
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 173 QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 232
Q + ++ +K ++ ++L++ ++ A+ N DK N + SV G +
Sbjct: 1252 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1302
Query: 233 LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 292
L+ I + ++ S+++ +++T+E L+ T + L+ ST+L L + SL+
Sbjct: 1303 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1358
Query: 293 LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 350
L++ + +++ + LS +S +L+ L+ + +++ L QQ
Sbjct: 1359 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1416
Query: 351 ----GYQSLNDIPDRVQRQTTTVVAGI 373
Y L +R+Q++ +V +
Sbjct: 1417 EKAAAYDKLEKTKNRLQQELDDLVVDL 1443
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 32.0 bits (71), Expect = 2.4
Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 173 QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 232
Q + ++ +K ++ ++L++ ++ A+ N DK N + SV G +
Sbjct: 1252 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1302
Query: 233 LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 292
L+ I + ++ S+++ +++T+E L+ T + L+ ST+L L + SL+
Sbjct: 1303 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1358
Query: 293 LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 350
L++ + +++ + LS +S +L+ L+ + +++ L QQ
Sbjct: 1359 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1416
Query: 351 ----GYQSLNDIPDRVQRQTTTVVAGI 373
Y L +R+Q++ +V +
Sbjct: 1417 EKAAAYDKLEKTKNRLQQELDDLVVDL 1443
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,343,011
Number of Sequences: 37866
Number of extensions: 1239464
Number of successful extensions: 3933
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3870
Number of HSP's gapped (non-prelim): 80
length of query: 833
length of database: 18,247,518
effective HSP length: 111
effective length of query: 722
effective length of database: 14,044,392
effective search space: 10140051024
effective search space used: 10140051024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.