Guide to the Human Genome
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Search of human proteins with 224493847

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224493847 t-complex 11 (mouse) like 1 [Homo sapiens]
         (509 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224493895 t-complex 11 (mouse) like 1 [Homo sapiens]               996   0.0  
gi|224493847 t-complex 11 (mouse) like 1 [Homo sapiens]               996   0.0  
gi|22749517 t-complex 11 (mouse) like 2 [Homo sapiens]                404   e-112
gi|148226214 t-complex 11 isoform 1 [Homo sapiens]                    341   8e-94
gi|8924256 t-complex 11 isoform 2 [Homo sapiens]                      315   8e-86
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s...    33   0.80 
gi|109826564 neurofibromin isoform 1 [Homo sapiens]                    32   1.0  
gi|4557793 neurofibromin isoform 2 [Homo sapiens]                      32   1.0  
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s...    31   3.0  
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s...    31   3.0  
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     31   3.0  
gi|29294631 purinergic receptor P2X7 [Homo sapiens]                    30   4.0  
gi|145699133 KPL2 protein isoform 1 [Homo sapiens]                     30   4.0  
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    30   6.8  
gi|109637791 transcription factor-like nuclear regulator [Homo s...    30   6.8  
gi|62988331 hypothetical protein LOC55780 [Homo sapiens]               30   6.8  
gi|38327029 ubiquitination factor E4A [Homo sapiens]                   29   8.9  
gi|7705415 hook homolog 1 [Homo sapiens]                               29   8.9  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     29   8.9  
gi|50083287 LIM homeobox 8 [Homo sapiens]                              29   8.9  

>gi|224493895 t-complex 11 (mouse) like 1 [Homo sapiens]
          Length = 509

 Score =  996 bits (2574), Expect = 0.0
 Identities = 509/509 (100%), Positives = 509/509 (100%)

Query: 1   MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60
           MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF
Sbjct: 1   MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60

Query: 61  VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120
           VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL
Sbjct: 61  VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120

Query: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
           SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA
Sbjct: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180

Query: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240
           EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ
Sbjct: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240

Query: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300
           QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS
Sbjct: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300

Query: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360
           PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG
Sbjct: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360

Query: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420
           ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK
Sbjct: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420

Query: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA 480
           ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA
Sbjct: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA 480

Query: 481 IKFARLVNYNKMVFCPYYDAILSKILVRS 509
           IKFARLVNYNKMVFCPYYDAILSKILVRS
Sbjct: 481 IKFARLVNYNKMVFCPYYDAILSKILVRS 509


>gi|224493847 t-complex 11 (mouse) like 1 [Homo sapiens]
          Length = 509

 Score =  996 bits (2574), Expect = 0.0
 Identities = 509/509 (100%), Positives = 509/509 (100%)

Query: 1   MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60
           MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF
Sbjct: 1   MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60

Query: 61  VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120
           VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL
Sbjct: 61  VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120

Query: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
           SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA
Sbjct: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180

Query: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240
           EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ
Sbjct: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240

Query: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300
           QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS
Sbjct: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300

Query: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360
           PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG
Sbjct: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360

Query: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420
           ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK
Sbjct: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420

Query: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA 480
           ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA
Sbjct: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVA 480

Query: 481 IKFARLVNYNKMVFCPYYDAILSKILVRS 509
           IKFARLVNYNKMVFCPYYDAILSKILVRS
Sbjct: 481 IKFARLVNYNKMVFCPYYDAILSKILVRS 509


>gi|22749517 t-complex 11 (mouse) like 2 [Homo sapiens]
          Length = 519

 Score =  404 bits (1037), Expect = e-112
 Identities = 224/507 (44%), Positives = 316/507 (62%), Gaps = 5/507 (0%)

Query: 1   MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60
           M  N +K  V E   S S+ S      A     E  +++  SDSSS        +SPPR 
Sbjct: 1   MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSS-SPASTSPPRV 59

Query: 61  VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120
           VT +E++ TAR ++N+ LAHEI VN +FQ+K   LPE SL  RVK IVH+AFWD L  +L
Sbjct: 60  VTFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSEL 119

Query: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
           + DPP ++HAIKL  EI+E LLSFL PG  RLRNQI EVLD DLI+Q+AE+ A+DI  LA
Sbjct: 120 NADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLA 179

Query: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240
            ++I  MG LCAP RD ++++LK    IV + R+IF VLDLM++DMANF I S+RPHL +
Sbjct: 180 NYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQR 239

Query: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300
           Q VEYER KFQEILE  P++LD  T+W++E+  + +    + AL  G   A +   P LS
Sbjct: 240 QLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPG---AENTSKPSLS 296

Query: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360
           P  V N +YLKLL+WD+ ++  PET++ D +R  EL  +L QL I+  + L+T +M    
Sbjct: 297 PTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAI 356

Query: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420
                + A +L  I  +LL  M+  +F+LK+VL +IG + C+EV+  L   G      + 
Sbjct: 357 TGGLPELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEI 416

Query: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLA-SGHQKPLPTVPGGLSPVQRELEEV 479
           +  L GQ  ++   D+PI  +++ RI  ++   L     QK +P +PGGL+ +Q+ELE +
Sbjct: 417 QANLIGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEAL 476

Query: 480 AIKFARLVNYNKMVFCPYYDAILSKIL 506
             ++A +VN NK V+ P+Y  IL K+L
Sbjct: 477 GSQYANIVNLNKQVYGPFYANILRKLL 503


>gi|148226214 t-complex 11 isoform 1 [Homo sapiens]
          Length = 516

 Score =  341 bits (875), Expect = 8e-94
 Identities = 199/500 (39%), Positives = 294/500 (58%), Gaps = 17/500 (3%)

Query: 16  SKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSS-PPRFVTVEELLETARGVT 74
           SK  D +E +     G  E   ++ K ++S P +  +  S  PP F++V  L ET   V+
Sbjct: 12  SKMPDVKESVPPKYPGDSEG--RSCKPETSGPPQEDKSGSEDPPPFLSVTGLTETVNEVS 69

Query: 75  NMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLV 134
              L+++I +N D+ ++   LP +SL+ +VKE VH AFWD L  QLS  PP +  A++L+
Sbjct: 70  K--LSNKIGMNCDYYMEEKVLPPSSLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELL 127

Query: 135 GEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPA 194
            EIKE LLS LLP   RLR +I E LD+DL+KQEAE+GAL +  L+++++ MM  LCAP 
Sbjct: 128 KEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEAEHGALKVLYLSKYVLNMMALLCAPV 187

Query: 195 RDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEIL 254
           RDE V+KL++I + V L R IF VL  MK+DM N+ I S++PHL + S++YER KFQE+L
Sbjct: 188 RDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVNYTIQSLQPHLQEHSIQYERAKFQELL 247

Query: 255 ERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPR--------LSPVAVQN 306
            +QP+ L+  T+WL +A+ DL T            ++ +G  P         LSP  V  
Sbjct: 248 NKQPSLLNHTTKWLTQAAGDL-TMSPPTCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLC 306

Query: 307 YAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPGISSQAD 366
             +L LL WD     FPET+LMD++R  EL+ QL QLT++ +VLLV  S +   +     
Sbjct: 307 QGFLNLLLWDLENEEFPETLLMDRTRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQ 366

Query: 367 FAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKG 426
           F +KLK I K LL D H      ++ + T+ E+V  E+   L   G    ++D    L G
Sbjct: 367 FVDKLKRITKSLLEDFH---SRPEEAILTVSEQVSQEIHQSLKNMGLVALSSDNTASLMG 423

Query: 427 QIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARL 486
           Q+Q +A  ++ +  +++ RI  FL+  L  G Q+ L  +PGGL+ ++ EL E+  KF  L
Sbjct: 424 QLQNIAKKENCVCSVIDQRIHLFLKCCLVLGVQRSLLDLPGGLTLIEAELAELGQKFVNL 483

Query: 487 VNYNKMVFCPYYDAILSKIL 506
            ++N+ VF PYY  IL  ++
Sbjct: 484 THHNQQVFGPYYTEILKTLI 503


>gi|8924256 t-complex 11 isoform 2 [Homo sapiens]
          Length = 441

 Score =  315 bits (806), Expect = 8e-86
 Identities = 175/416 (42%), Positives = 251/416 (60%), Gaps = 12/416 (2%)

Query: 99  SLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITE 158
           SL+ +VKE VH AFWD L  QLS  PP +  A++L+ EIKE LLS LLP   RLR +I E
Sbjct: 17  SLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEE 76

Query: 159 VLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSV 218
            LD+DL+KQEAE+GAL +  L+++++ MM  LCAP RDE V+KL++I + V L R IF V
Sbjct: 77  ALDMDLLKQEAEHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQV 136

Query: 219 LDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQ 278
           L  MK+DM N+ I S++PHL + S++YER KFQE+L +QP+ L+  T+WL +A+ DL T 
Sbjct: 137 LGRMKMDMVNYTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGDL-TM 195

Query: 279 KYKHALPVGGMAAGSGDMPR--------LSPVAVQNYAYLKLLKWDHLQRPFPETVLMDQ 330
                      ++ +G  P         LSP  V    +L LL WD     FPET+LMD+
Sbjct: 196 SPPTCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENEEFPETLLMDR 255

Query: 331 SRFHELQLQLEQLTILGAVLLVTFSMAAPGISSQADFAEKLKMIVKILLTDMHLPSFHLK 390
           +R  EL+ QL QLT++ +VLLV  S +   +     F +KLK I K LL D H      +
Sbjct: 256 TRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKRITKSLLEDFH---SRPE 312

Query: 391 DVLTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKGQIQAVASPDDPIRRIMESRILTFL 450
           + + T+ E+V  E+   L   G    ++D    L GQ+Q +A  ++ +  +++ RI  FL
Sbjct: 313 EAILTVSEQVSQEIHQSLKNMGLVALSSDNTASLMGQLQNIAKKENCVCSVIDQRIHLFL 372

Query: 451 ETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARLVNYNKMVFCPYYDAILSKIL 506
           +  L  G Q+ L  +PGGL+ ++ EL E+  KF  L ++N+ VF PYY  IL  ++
Sbjct: 373 KCCLVLGVQRSLLDLPGGLTLIEAELAELGQKFVNLTHHNQQVFGPYYTEILKTLI 428


>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
           sapiens]
          Length = 1719

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 38/203 (18%), Positives = 86/203 (42%), Gaps = 10/203 (4%)

Query: 63  VEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVH--KAFWDCLSVQL 120
           ++E  +T + +    +   +  + D +IK ++     L+K+V E  H  +   +  +V+ 
Sbjct: 462 LQESTQTVQALQYSTVDGPLTASKDLEIKNLKEEIEKLRKQVTESSHLEQQLEEANAVRQ 521

Query: 121 SEDPP-----AYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALD 175
             D       AY+  IK + + +E L   L+    RL+NQ  E+ D    ++ A    ++
Sbjct: 522 ELDDAFRQIKAYEKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFME 581

Query: 176 ISKLAEFIIGMMGTLCAPARDEEVK---KLKDIKEIVPLFREIFSVLDLMKVDMANFAIS 232
           I++    +      L    RD+E +    ++ ++ +    R        ++V     A  
Sbjct: 582 INERLTELHTQKQKLARHVRDKEEEVDLVMQKVESLRQELRRTERAKKELEVHTEALAAE 641

Query: 233 SIRPHLMQQSVEYERKKFQEILE 255
           + +   +++  E+  K+ +  LE
Sbjct: 642 ASKDRKLREQSEHYSKQLENELE 664


>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
          Length = 2839

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 363  SQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKET 422
            SQ  F+E+ K ++++ LT+  LP F+L   ++ +     +   S       SP + ++ET
Sbjct: 2137 SQLHFSEETKQVLRLSLTEFSLPKFYLLFGISKVKSAAVIAFRSSYRDRSFSPGSYERET 2196

Query: 423  VLKGQIQAVASPDDPIRRIMES 444
                 ++ V    + +  IME+
Sbjct: 2197 FALTSLETVT---EALLEIMEA 2215


>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
          Length = 2818

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 363  SQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKET 422
            SQ  F+E+ K ++++ LT+  LP F+L   ++ +     +   S       SP + ++ET
Sbjct: 2116 SQLHFSEETKQVLRLSLTEFSLPKFYLLFGISKVKSAAVIAFRSSYRDRSFSPGSYERET 2175

Query: 423  VLKGQIQAVASPDDPIRRIMES 444
                 ++ V    + +  IME+
Sbjct: 2176 FALTSLETVT---EALLEIMEA 2194


>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
           sapiens]
          Length = 652

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 122 EDPPAYDHAIKLVGEIKETLLSFLLPG-HTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
           ED    +   +L+GE ++ L   LLP    RLR++  + LD D +K+E+E     ++ L 
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLA-LT 479

Query: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVP 210
             +  ++  L      E VKK K  K +VP
Sbjct: 480 STLNKLIKRLEEKQSPELVKKHKK-KRVVP 508


>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
           sapiens]
          Length = 597

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 122 EDPPAYDHAIKLVGEIKETLLSFLLPG-HTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
           ED    +   +L+GE ++ L   LLP    RLR++  + LD D +K+E+E     ++ L 
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLA-LT 479

Query: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVP 210
             +  ++  L      E VKK K  K +VP
Sbjct: 480 STLNKLIKRLEEKQSPELVKKHKK-KRVVP 508


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 31/229 (13%)

Query: 62  TVEELLETARGVTNMALA--HEIVVNGDFQIKPVELPENSLKKRVKEIV--HKAFWDCLS 117
           T+EEL   AR +   AL   HE ++  + Q K +E+ E  LKK ++++   HK   D LS
Sbjct: 742 TIEEL-SNARNLNTSALQLEHEHLIKLN-QKKDMEIAE--LKKNIEQMDTDHKETKDVLS 797

Query: 118 VQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDL----DLIKQEAENGA 173
             L E         +L+ + KE  +  L    ++L+ ++ +        ++++Q  E   
Sbjct: 798 SSLEEQK----QLTQLINK-KEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKD 852

Query: 174 LDISKLAEFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISS 233
             +  + E    +          EE+++L++ +       +  ++  + ++      +++
Sbjct: 853 RSLGSMKEENNHLQ---------EELERLREEQSRTAPVADPKTLDSVTELASEVSQLNT 903

Query: 234 IRPHLMQQSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKH 282
           I+ HL     E E K  Q+I+E Q  S   + Q L+E  +++   +Y+H
Sbjct: 904 IKEHL-----EEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQH 947


>gi|29294631 purinergic receptor P2X7 [Homo sapiens]
          Length = 595

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)

Query: 127 YDHAIKLVGEIKETL--LSFLLPGHTRLRNQITEVLDLDLIK-QEAENGALDISKLAEFI 183
           Y    + + E K TL  +SF+   H R+ NQ      L  +K QE    A+D + L+   
Sbjct: 384 YRKKCESIVEPKPTLKYVSFVDESHIRMVNQQLLGRSLQDVKGQEVPRPAMDFTDLSRLP 443

Query: 184 IGMMGTLCAPARDEEVKKLKDIKEIVPLFRE 214
           + +  T   P + EE++ L+  KE  P  R+
Sbjct: 444 LALHDTPPIPGQPEEIQLLR--KEATPRSRD 472


>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
          Length = 1822

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)

Query: 193  PARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQ-----SVEYE- 246
            P  +E V   + + E +PLF  +    +L++    N  I ++  HL +      +  YE 
Sbjct: 1007 PGSEEWVYVNEPVPEEMPLF--LVPYWELIENSYIN-TIKTVLRHLREDQHTVLAYLYEI 1063

Query: 247  RKKFQEILERQPNSLDFVTQW 267
            R  FQE L+R  +  DFV QW
Sbjct: 1064 RTSFQEFLKRPDHKQDFVAQW 1084


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)

Query: 6   DKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRFVTVEE 65
           DK    + GKS++   E  L +    A+   ++A +     P+ ++    S  +F +   
Sbjct: 156 DKKKRKDEGKSRTTLPERPLTEVK--AETRAEEAPEKKREKPKSLRTTAPSHAKFRSTGL 213

Query: 66  LLETARGVTNMALAHEIVVNGDFQIKPVELPENS 99
            LET   V     A  +VV+  + +KP+ L   S
Sbjct: 214 ELETPSLVPVKKNASTVVVSDKYNLKPIPLKRQS 247


>gi|109637791 transcription factor-like nuclear regulator [Homo
            sapiens]
          Length = 2624

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)

Query: 2    SENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRFV 61
            +E +DK ++ E G+ + +  E G E+ V+  DE     +++D  +  R           +
Sbjct: 1138 TEEIDK-DLEETGRREISPEENGPEE-VKPVDE-----METDLKTTGREGSSREKTREVI 1190

Query: 62   TVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEI 107
               E++ET    T   ++ +   NG  ++KPV   E  LK+  +EI
Sbjct: 1191 DAAEVIETDLEETEREISPQ--ENGPEEVKPVGKMETDLKEIREEI 1234


>gi|62988331 hypothetical protein LOC55780 [Homo sapiens]
          Length = 678

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 80  HEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKE 139
           ++I+ N  FQ++      NS+  +  E+  K   DC+S   SE    Y  +++L+G + E
Sbjct: 18  YDIICNLGFQLRE-NCDINSIVTQNGEVCWKTITDCVSYTESEQGLDYWGSVRLLGPVCE 76

Query: 140 TLLSFLL 146
            + S  L
Sbjct: 77  AVHSHFL 83


>gi|38327029 ubiquitination factor E4A [Homo sapiens]
          Length = 1073

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 15/153 (9%)

Query: 224 VDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSL------------DFVTQWLEEA 271
           V   N  +S+ R  L+   +  ++   +++++    ++            + VT++LEE 
Sbjct: 200 VQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAIQGAREYMNKIYFEDVTEFLEEV 259

Query: 272 SEDLMTQKYKHALPVGGMAAGS---GDMPRLSPVAVQNYAYLKLLKWDHLQRPFPETVLM 328
            E L+  +     P   +       G +  L    +  YAYL +L +   Q+   +  + 
Sbjct: 260 IEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQILLYAYLDILLYFTRQKDMAKVFVE 319

Query: 329 DQSRFHELQLQLEQLTILGAVLLVTFSMAAPGI 361
                     Q+ Q T+LG +L ++  +  PG+
Sbjct: 320 YIQPKDPTNGQMYQKTLLGVILSISCLLKTPGV 352


>gi|7705415 hook homolog 1 [Homo sapiens]
          Length = 728

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 137 IKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPARD 196
           +K+ L   +   H  L  QI+E L  DL +    +  +++ +L + I+G     CA   +
Sbjct: 78  VKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILG-----CAINCE 132

Query: 197 EEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILER 256
              KK + I+ I+ L   +  V+     ++ +  I S  P+     +E + K+  E L+ 
Sbjct: 133 ---KKQEHIQNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAVGELEQQLKRALEELQE 189

Query: 257 QPNSLDFVTQWLEEASEDLMT-QKYKHALPVGGMAAGSGDMPRLSPVAVQNYAYLKLLKW 315
                + + Q  EE    + T Q  K++L              +S   + N       K 
Sbjct: 190 ALAEKEELRQRCEELDMQVTTLQDEKNSL--------------VSENEMMNE------KL 229

Query: 316 DHLQRPFPETVLMDQSRFHELQLQLEQL 343
           D L   F +   +   ++   QLQLEQL
Sbjct: 230 DQLDGSFDDPNTVVAKKYFHAQLQLEQL 257


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 14/189 (7%)

Query: 198  EVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQ 257
            EV   K +KE   L  ++  +  L + D     +S +   L     E++  K     E+ 
Sbjct: 1140 EVDLNKSLKENTFLQEQLVELKMLAEEDKRK--VSELTSKLKTTDEEFQSLKSSH--EKS 1195

Query: 258  PNSLDFVTQWLEEASEDLMTQ-----KYKHALPVGGMAAGSGDMPRLSPVAVQNYAYLKL 312
              SL+  +   ++ SE+L  Q     K   AL    + A + ++  +S  +  N    ++
Sbjct: 1196 NKSLEDKSLEFKKLSEELAIQLDICCKKTEAL----LEAKTNELINISS-SKTNAILSRI 1250

Query: 313  LKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPGISSQADFAEKLK 372
                H      E +L+      EL+ QL QLT     L ++F  A   +  + +  + +K
Sbjct: 1251 SHCQHRTTKVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQLEEKENQIKSMK 1310

Query: 373  MIVKILLTD 381
              ++ L+T+
Sbjct: 1311 ADIESLVTE 1319


>gi|50083287 LIM homeobox 8 [Homo sapiens]
          Length = 356

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 1  MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGA---DEALQKAIKSDSSSPQRVQRPHSSP 57
          MSE   ++    AG+++    EEGL  + EGA   D     A  S SSSP+ +      P
Sbjct: 11 MSEECGRTTALAAGRTRKGAGEEGLV-SPEGAGDEDSCSSSAPLSPSSSPRSMASGSGCP 69

Query: 58 P 58
          P
Sbjct: 70 P 70


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,702,593
Number of Sequences: 37866
Number of extensions: 821669
Number of successful extensions: 2560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2544
Number of HSP's gapped (non-prelim): 24
length of query: 509
length of database: 18,247,518
effective HSP length: 107
effective length of query: 402
effective length of database: 14,195,856
effective search space: 5706734112
effective search space used: 5706734112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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