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Search of human proteins with 224465187
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224465187 secernin 1 isoform a [Homo sapiens]
(414 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224465194 secernin 1 isoform a [Homo sapiens] 848 0.0
gi|224465190 secernin 1 isoform b [Homo sapiens] 848 0.0
gi|224465187 secernin 1 isoform a [Homo sapiens] 848 0.0
gi|224465192 secernin 1 isoform c [Homo sapiens] 710 0.0
gi|222537732 secernin 2 isoform 1 [Homo sapiens] 431 e-121
gi|38504671 secernin 3 [Homo sapiens] 418 e-117
gi|222537730 secernin 2 isoform 2 [Homo sapiens] 408 e-114
gi|21956639 ankyrin repeat and BTB (POZ) domain containing 2 [Ho... 32 0.81
gi|194097341 period 1 [Homo sapiens] 32 1.1
gi|92110019 hypothetical protein LOC55672 [Homo sapiens] 32 1.1
gi|190341074 pyridoxal-dependent decarboxylase domain containing... 32 1.4
gi|110611218 ribosome binding protein 1 [Homo sapiens] 31 1.8
gi|110611220 ribosome binding protein 1 [Homo sapiens] 31 1.8
gi|171906567 peripheral benzodiazepine receptor-associated prote... 31 2.4
gi|171906559 peripheral benzodiazepine receptor-associated prote... 31 2.4
gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens] 30 3.1
gi|31542509 ADP-dependent glucokinase [Homo sapiens] 30 4.0
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 29 6.9
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 29 6.9
gi|22547134 mitochondrial ribosomal protein L37 [Homo sapiens] 29 6.9
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 29 9.0
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 29 9.0
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 29 9.0
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 29 9.0
gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo s... 29 9.0
gi|7657017 hypothetical protein LOC25832 [Homo sapiens] 29 9.0
gi|168823435 hypothetical protein LOC79747 [Homo sapiens] 29 9.0
>gi|224465194 secernin 1 isoform a [Homo sapiens]
Length = 414
Score = 848 bits (2190), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 60
MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID
Sbjct: 1 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 60
Query: 61 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 120
QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG
Sbjct: 61 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 120
Query: 121 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 180
ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV
Sbjct: 121 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 180
Query: 181 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 240
TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD
Sbjct: 181 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 240
Query: 241 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 300
SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP
Sbjct: 241 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 300
Query: 301 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 360
SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES
Sbjct: 301 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 360
Query: 361 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK
Sbjct: 361 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
>gi|224465190 secernin 1 isoform b [Homo sapiens]
Length = 434
Score = 848 bits (2190), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 60
MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID
Sbjct: 21 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 80
Query: 61 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 120
QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG
Sbjct: 81 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 140
Query: 121 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 180
ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV
Sbjct: 141 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 200
Query: 181 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 240
TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD
Sbjct: 201 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 260
Query: 241 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 300
SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP
Sbjct: 261 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 320
Query: 301 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 360
SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES
Sbjct: 321 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 380
Query: 361 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK
Sbjct: 381 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 434
>gi|224465187 secernin 1 isoform a [Homo sapiens]
Length = 414
Score = 848 bits (2190), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 60
MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID
Sbjct: 1 MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISID 60
Query: 61 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 120
QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG
Sbjct: 61 QVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERG 120
Query: 121 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 180
ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV
Sbjct: 121 ETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKV 180
Query: 181 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 240
TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD
Sbjct: 181 TEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKD 240
Query: 241 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 300
SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP
Sbjct: 241 SLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDP 300
Query: 301 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 360
SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES
Sbjct: 301 SRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIES 360
Query: 361 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK
Sbjct: 361 DQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
>gi|224465192 secernin 1 isoform c [Homo sapiens]
Length = 346
Score = 710 bits (1832), Expect = 0.0
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128
MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD
Sbjct: 1 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 60
Query: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188
VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC
Sbjct: 61 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 120
Query: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEES 248
SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEES
Sbjct: 121 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEES 180
Query: 249 ITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPSRSIFKPF 308
ITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPSRSIFKPF
Sbjct: 181 ITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPSRSIFKPF 240
Query: 309 IFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKL 368
IFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKL
Sbjct: 241 IFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKL 300
Query: 369 RSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
RSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK
Sbjct: 301 RSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 346
>gi|222537732 secernin 2 isoform 1 [Homo sapiens]
Length = 425
Score = 431 bits (1108), Expect = e-121
Identities = 211/408 (51%), Positives = 286/408 (70%), Gaps = 8/408 (1%)
Query: 9 CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68
CFV+ PP + V+F KNS RPRDEVQEVV+ A H P S+++CTYI ++QV +T+A+
Sbjct: 14 CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73
Query: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128
++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL
Sbjct: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
Query: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188
VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I
Sbjct: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
Query: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241
+QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + AG++
Sbjct: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
Query: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301
L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
Query: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361
RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D
Sbjct: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
Query: 362 QEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTE 409
Q++G++L+ +LE++GLEA + +L E+G LF V E
Sbjct: 373 QDRGQQLQQKQQDLEQEGLEATQGLLAGEWAPPLWELGSLFQAFVKRE 420
>gi|38504671 secernin 3 [Homo sapiens]
Length = 424
Score = 418 bits (1074), Expect = e-117
Identities = 219/416 (52%), Positives = 289/416 (69%), Gaps = 20/416 (4%)
Query: 10 FVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEP-ESKVECTYISIDQVPRTYAI 68
FVA PP D ++FGKNS R DEVQEVVYF A H+ +++CTYI IDQVP TYA+
Sbjct: 9 FVALPPATVDNRIIFGKNSDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQVPETYAV 68
Query: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128
++SRPAWLWGAEMGANEHGVCI NEA+ RE + EALLGMDLVRLGLER +TA++AL+
Sbjct: 69 VLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALN 128
Query: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188
VIV LLE++GQGGN E S+ +++LI DR+EAW+LET GKYWAAEKV EGVR I
Sbjct: 129 VIVDLLEKYGQGGNCTE-GRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNIS 187
Query: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCG----------AG 238
+QLS+TTK+ EHP++R+YA+ +GWW G+ EF+F+ +S +LD G
Sbjct: 188 NQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYS----YLDTAKMMTSSGRYCEG 243
Query: 239 KDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTP 298
L K + +IT +TMM LRDK SG+ ++ E FLTTAS VS+LPQ+ S PCIH+FTGTP
Sbjct: 244 YKLLNKHKGNITFETMMEILRDKPSGINMEGE-FLTTASMVSILPQDSSLPCIHFFTGTP 302
Query: 299 DPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAII 358
DP RS+FKPFIFV + + T SP F +D KK+ F KPDRRH LY+ H+ A ++
Sbjct: 303 DPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHF--KPDRRHPLYQKHQQALEVV 360
Query: 359 ESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK 414
+++E+ + + M +LEK+ ME IL ++ LD ++ +LF C EI+ ++
Sbjct: 361 NNNEEKAKIMLDNMRKLEKELFREMESIL-QNKHLDVEKIVNLFPQCTKDEIQIYQ 415
>gi|222537730 secernin 2 isoform 2 [Homo sapiens]
Length = 378
Score = 408 bits (1049), Expect = e-114
Identities = 197/366 (53%), Positives = 262/366 (71%), Gaps = 8/366 (2%)
Query: 9 CFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAI 68
CFV+ PP + V+F KNS RPRDEVQEVV+ A H P S+++CTYI ++QV +T+A+
Sbjct: 14 CFVSVPPASAIPAVIFAKNSDRPRDEVQEVVFVPAGTHTPGSRLQCTYIEVEQVSKTHAV 73
Query: 69 MISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALD 128
++SRP+WLWGAEMGANEHGVCI NEA+ T+EP E EALLGMDL+RL LER +A+EAL
Sbjct: 74 ILSRPSWLWGAEMGANEHGVCIGNEAVWTKEPVGEGEALLGMDLLRLALERSSSAQEALH 133
Query: 129 VIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCIC 188
VI LLE +GQGGN EDA + S+ S +L+ DR EAWVLET G+ WAA+++ EG R I
Sbjct: 134 VITGLLEHYGQGGNCLEDA-APFSYHSTFLLADRTEAWVLETAGRLWAAQRIQEGARNIS 192
Query: 189 SQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDC-------GAGKDS 241
+QLS+ T + A+HPELR++AQ++GWW G+G F+F+++FS + + AG++
Sbjct: 193 NQLSIGTDISAQHPELRTHAQAKGWWDGQGAFDFAQIFSLTQQPVRMEAAKARFQAGREL 252
Query: 242 LEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPS 301
L +++ IT + MM LRDK SG+C+DS F TTAS VSVLPQ+ + PC+H+ T TPDPS
Sbjct: 253 LRQRQGGITAEVMMGILRDKESGICMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPS 312
Query: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361
RS+FKPFIF V P+ SP FG DP + PRFQ + DRRH LY+ H+ A ++E D
Sbjct: 313 RSVFKPFIFGMGVAQAPQVLSPTFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERD 372
Query: 362 QEQGRK 367
Q R+
Sbjct: 373 QVSPRE 378
>gi|21956639 ankyrin repeat and BTB (POZ) domain containing 2 [Homo
sapiens]
Length = 839
Score = 32.3 bits (72), Expect = 0.81
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 80 EMGANEHGVCIANEAINTREPAAEIEALLG-MDLVRLGLERGETAKEALDVIVSLLEEHG 138
+ GA+ G + + E ++ + G +LV L L RG D ++S+LE HG
Sbjct: 403 DAGAHVEGSAVNGGEDSYAETPLQLASAAGNYELVSLLLSRGA------DPLLSMLEAHG 456
Query: 139 QGGNYFEDANSCHSFQSAY 157
G + ED N C S +A+
Sbjct: 457 MGSSLHEDMN-CFSHSAAH 474
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 32.0 bits (71), Expect = 1.1
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 16/68 (23%)
Query: 332 KKEPRFQEKPDRRHELYKAHEWAR-----------AIIE---SDQEQGRKLRSTMLELEK 377
K++PRF E D+R EL H W R A ++ S Q+ G EL+
Sbjct: 1168 KQQPRFSE--DQRRELGAVHSWVRKGQLPRALDVMACVDCGSSTQDPGHPDDPLFSELDG 1225
Query: 378 QGLEAMEE 385
GLE MEE
Sbjct: 1226 LGLEPMEE 1233
>gi|92110019 hypothetical protein LOC55672 [Homo sapiens]
Length = 1214
Score = 32.0 bits (71), Expect = 1.1
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 143 YFEDANSCHSFQSAYLIVDRDE-AWVL--ETIGKYWAAEKVTEGVRCICSQLSLTTKMDA 199
Y E +SC ++SA+ I+++ W L + I KY ++V E C +LS +D
Sbjct: 917 YLELTDSCQPYRSAFYILEQQRVGWALDMDEIEKY---QEVEEDQDPSCPRLS-RELLDE 972
Query: 200 EHPEL------RSYAQSQGW--WTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEE 247
+ PE+ R Y+ G+ G+ S V+S E +L D ++K +E
Sbjct: 973 KEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLALDVDRIKKDQE 1028
>gi|190341074 pyridoxal-dependent decarboxylase domain containing 1
[Homo sapiens]
Length = 788
Score = 31.6 bits (70), Expect = 1.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 312 DDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKLRST 371
D V ++ Q+ GD+D + PR Q ++ H H I D+E+ RKL +
Sbjct: 57 DMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTR 116
Query: 372 ML 373
+L
Sbjct: 117 IL 118
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 31.2 bits (69), Expect = 1.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 352 EWARAIIESDQEQGRKLRSTMLELEKQGLEAMEEI--LTSSEPLDPAE 397
EW AI+E +Q Q +KL + E + EE+ L ++ PL+ +E
Sbjct: 862 EWTEAILEDEQTQRQKLTAEFEEAQTSACRLQEELEKLRTAGPLESSE 909
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 31.2 bits (69), Expect = 1.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 352 EWARAIIESDQEQGRKLRSTMLELEKQGLEAMEEI--LTSSEPLDPAE 397
EW AI+E +Q Q +KL + E + EE+ L ++ PL+ +E
Sbjct: 862 EWTEAILEDEQTQRQKLTAEFEEAQTSACRLQEELEKLRTAGPLESSE 909
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 30.8 bits (68), Expect = 2.4
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 338 QEKPDRRHELYKAHEWARAIIESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAE 397
+E RR +L HE AR + QE+ R+L+ E +++ E ++L S+ A
Sbjct: 382 REVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREH-EGAVQLLESTLDSMQAR 440
Query: 398 VGDLFYDC 405
V +L C
Sbjct: 441 VRELEEQC 448
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 30.8 bits (68), Expect = 2.4
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 338 QEKPDRRHELYKAHEWARAIIESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAE 397
+E RR +L HE AR + QE+ R+L+ E +++ E ++L S+ A
Sbjct: 442 REVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREH-EGAVQLLESTLDSMQAR 500
Query: 398 VGDLFYDC 405
V +L C
Sbjct: 501 VRELEEQC 508
>gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 30.4 bits (67), Expect = 3.1
Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 159 IVDRDEAWVLETIGKYWAAEKVTEGVRCICSQLSLTTKMDAE----------HPELRSYA 208
I+DRD+ +V E G+ A E E + T D HP L S
Sbjct: 563 ILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYNNSYYGLMLFGHPLLVSVP 622
Query: 209 QSQGWWTGEGEFNF------SEVFSPVEDHLDCGAGKDSLEKQEESITVQTMMNTLRD-- 260
+ + W EG +N V P D D G K+ E+ ++ + + +LRD
Sbjct: 623 RDRFTW--EGLYNVLMYRLSRYVTKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLRDPE 680
Query: 261 -----KASGVCIDSEFFLTTASGVSVLPQNR 286
+SGV F L G S P R
Sbjct: 681 PEQAGPSSGVTNRCPFLLDNCLGTSQWPPRR 711
>gi|31542509 ADP-dependent glucokinase [Homo sapiens]
Length = 496
Score = 30.0 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 128 DVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAE--KVTEGVR 185
D++ +L+EHG+ + D H Y +L T+ +WA + V G R
Sbjct: 356 DILFWILKEHGRSKSRASDLTRIHFHTLVY--------HILATVDGHWANQLAAVAAGAR 407
Query: 186 CICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSP 228
+Q T +D LR+ Q + T E V +P
Sbjct: 408 VAGTQACATETIDTSRVSLRA---PQEFMTSHSEAGSRIVLNP 447
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 29.3 bits (64), Expect = 6.9
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 338 QEKPDRRHELYKAH---EWARAIIESDQEQGRKLRSTMLELEKQGLE 381
QEK +++H+L E R +I+ QEQ + L+ST EL+ + L+
Sbjct: 691 QEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQ 737
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 29.3 bits (64), Expect = 6.9
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 338 QEKPDRRHELYKAH---EWARAIIESDQEQGRKLRSTMLELEKQGLE 381
QEK +++H+L E R +I+ QEQ + L+ST EL+ + L+
Sbjct: 830 QEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQ 876
>gi|22547134 mitochondrial ribosomal protein L37 [Homo sapiens]
Length = 423
Score = 29.3 bits (64), Expect = 6.9
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 306 KPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPD-RRHELYK 349
+P F + VP P F D K+PRF P H LYK
Sbjct: 56 EPITFAGKMHFVPWLARPIFPPWDRGYKDPRFYRSPPLHEHPLYK 100
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 28.9 bits (63), Expect = 9.0
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 145 EDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCICSQLSLTTKMDAEHPEL 204
E +SC ++SA+ I+++ + + + ++V E C +LS +D + PE+
Sbjct: 3165 ELCDSCQPYRSAFYILEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLS-RELLDEKEPEV 3223
Query: 205 ------RSYAQSQGW--WTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEE 247
R Y+ G+ G+ S V+S E +L D ++K +E
Sbjct: 3224 LQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQE 3274
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 28.9 bits (63), Expect = 9.0
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 185 RCICSQLSLTTKMDAE------HP----ELRSYAQSQGWWTGE 217
RC C Q SL T E HP +LRS Q Q W TGE
Sbjct: 600 RCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGE 642
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 28.9 bits (63), Expect = 9.0
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 185 RCICSQLSLTTKMDAE------HP----ELRSYAQSQGWWTGE 217
RC C Q SL T E HP +LRS Q Q W TGE
Sbjct: 600 RCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGE 642
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 28.9 bits (63), Expect = 9.0
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 185 RCICSQLSLTTKMDAE------HP----ELRSYAQSQGWWTGE 217
RC C Q SL T E HP +LRS Q Q W TGE
Sbjct: 600 RCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGE 642
>gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo
sapiens]
Length = 323
Score = 28.9 bits (63), Expect = 9.0
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 331 AKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKLRSTMLELEKQGLEAMEE 385
AK EPR Q P A ++A+AIIE + + ++ + E EK L+A+ +
Sbjct: 52 AKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVSREVHEFEKDILKAISK 106
>gi|7657017 hypothetical protein LOC25832 [Homo sapiens]
Length = 921
Score = 28.9 bits (63), Expect = 9.0
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 145 EDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCICSQLSLTTKMDAEHPEL 204
E +SC ++SA+ ++++ + + + ++V E C +LS +D + PE+
Sbjct: 308 ELTDSCQPYRSAFYVLEQQRVGLAVNMDEIEKYQEVEEDQDPSCPRLS-RELLDEKEPEV 366
Query: 205 ------RSYAQSQGW--WTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEE 247
R Y+ G+ G+ S V+S E +L D ++K +E
Sbjct: 367 LQDSLGRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQE 417
Score = 28.9 bits (63), Expect = 9.0
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 145 EDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCICSQLSLTTKMDAEHPEL 204
E +SC ++SA+ I+++ + + + ++V E C +LS +D + PE+
Sbjct: 627 ELTDSCQPYRSAFYILEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLS-RELLDEKEPEV 685
Query: 205 ------RSYAQSQGW--WTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEE 247
R Y+ G+ G+ S V+S E +L D ++K +E
Sbjct: 686 LQDSLGRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQE 736
>gi|168823435 hypothetical protein LOC79747 [Homo sapiens]
Length = 1667
Score = 28.9 bits (63), Expect = 9.0
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 302 RSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESD 361
R I K F+D + V KT + D ++ Q K + H+ + +I D
Sbjct: 1529 RLIRKALEFMDLSQYVRKTDTDPLLQTDELNQQQAMQ-KAEEIHQFRQHRTRVLSIRNID 1587
Query: 362 QEQGRKLRSTMLELEKQGLEAMEE 385
QE+ KL+ +L++ K+ ++++E
Sbjct: 1588 QEERLKLKDEVLDMYKEMQDSLDE 1611
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,589,577
Number of Sequences: 37866
Number of extensions: 757388
Number of successful extensions: 1910
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1875
Number of HSP's gapped (non-prelim): 42
length of query: 414
length of database: 18,247,518
effective HSP length: 105
effective length of query: 309
effective length of database: 14,271,588
effective search space: 4409920692
effective search space used: 4409920692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.