Guide to the Human Genome
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Search of human proteins with 223942014

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223942014 jumonji domain containing 5 isoform 2 [Homo
sapiens]
         (416 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]     863   0.0  
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]     863   0.0  
gi|89242134 hypothetical protein LOC129450 [Homo sapiens]             101   1e-21
gi|167860114 jumonji domain containing 7 [Homo sapiens]                94   2e-19
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor...    94   3e-19
gi|21314714 Hspb associated protein 1 [Homo sapiens]                   91   3e-18
gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]                        67   4e-11
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]      50   5e-06
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]      50   5e-06
gi|56090146 jumonji domain containing 8 [Homo sapiens]                 44   4e-04
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]      40   0.005
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]      40   0.005
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]       37   0.043
gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo sapi...    31   1.8  
gi|34787409 hypothetical protein LOC57148 [Homo sapiens]               30   4.0  
gi|39930351 dynamin binding protein [Homo sapiens]                     30   5.3  
gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens]       30   5.3  
gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens]      30   5.3  
gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens]      30   5.3  
gi|55749600 spire homolog 2 [Homo sapiens]                             29   9.0  

>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
          Length = 454

 Score =  863 bits (2231), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 60
           MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR
Sbjct: 39  MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 98

Query: 61  RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 120
           RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL
Sbjct: 99  RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 158

Query: 121 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 180
           RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL
Sbjct: 159 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 218

Query: 181 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 240
           EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG
Sbjct: 219 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 278

Query: 241 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 300
           SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG
Sbjct: 279 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 338

Query: 301 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 360
           EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT
Sbjct: 339 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 398

Query: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416
           SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS
Sbjct: 399 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 454


>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
          Length = 416

 Score =  863 bits (2231), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 60
           MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR
Sbjct: 1   MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 60

Query: 61  RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 120
           RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL
Sbjct: 61  RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 120

Query: 121 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 180
           RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL
Sbjct: 121 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 180

Query: 181 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 240
           EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG
Sbjct: 181 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 240

Query: 241 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 300
           SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG
Sbjct: 241 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 300

Query: 301 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 360
           EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT
Sbjct: 301 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 360

Query: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416
           SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS
Sbjct: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416


>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
          Length = 315

 Score =  101 bits (252), Expect = 1e-21
 Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 39/257 (15%)

Query: 184 VPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS-- 241
           VPRL   S + F +      +P++L+G+ D  PC  KW+++Y+ ++ G + V + V +  
Sbjct: 8   VPRLEGVSREQFMQHLYPQRKPLVLEGI-DLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 66

Query: 242 ---------------------RYTDEEWSQTLMTVNE-FISKYIVNEPR-DVGYLAQHQL 278
                                R  +E+  +  ++ +E +  + +  +PR DV  + +   
Sbjct: 67  QMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRK--- 123

Query: 279 FDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI 338
             Q P LK DI  P++      EE+  +        G     H D   N L+QV G+K +
Sbjct: 124 --QFPLLKGDIKFPEFFK----EEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRV 177

Query: 339 RLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKY 398
            L+SP+++  LY   T     +  ++++NPDL K+P F+KA    C L  G++LFIP  +
Sbjct: 178 VLFSPRDAQYLYLKGT----KSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALW 233

Query: 399 WHYVRALDLSFSVSFWW 415
           +H V + +    V+ +W
Sbjct: 234 FHNVISEEFGVGVNIFW 250


>gi|167860114 jumonji domain containing 7 [Homo sapiens]
          Length = 316

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 34/265 (12%)

Query: 184 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 241
           VP L +P    HF   ++ P RP I++    HWP +QKWSL Y +   G   V V V   
Sbjct: 29  VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88

Query: 242 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 290
            Y D       M   E      F+   +    +  G L  Q Q   L  ++P+L  D+ S
Sbjct: 89  GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148

Query: 291 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI------------ 338
              + S   G+  +  +N W G    ++ LH+D  +N    V G K+             
Sbjct: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIP 207

Query: 339 -RLYSP-----QESGALYPHDTHLLHNTSQVDVE--NPDLEKFPKFAKAPFLSCILSPGE 390
             LY+P      E G     D   +     + ++   PDL ++P +++A  L C +  GE
Sbjct: 208 YELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGE 267

Query: 391 ILFIPVKYWHYVRALDLSFSVSFWW 415
           +L++P  ++H+V+      +V+FW+
Sbjct: 268 MLYLPALWFHHVQQSQGCIAVNFWY 292


>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
           [Homo sapiens]
          Length = 349

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 30/261 (11%)

Query: 182 KTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS 241
           + +PRL +   +   E+ +    PV+L      +P + KW LEY+QE  G     V   S
Sbjct: 40  RPIPRLSQSDPR--AEELIENEEPVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSAS 96

Query: 242 R----YTDEEWSQTL-----------MTVNEFISKY--IVNEPRDVGYLAQHQLFDQIP- 283
                Y DE+                M  +EF+ K   I     +     Q  L D +  
Sbjct: 97  THKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR 156

Query: 284 ELKQDISIPDYCSLGDGEEE----EITINAWF-GPQGTISPLHQDPQQNFLVQVMGRKYI 338
           ++  D    ++  +   + +    ++T N    G +G ++P H D QQNF  Q+ G K  
Sbjct: 157 KIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRC 216

Query: 339 RLYSPQESGALYPHDTHL-LHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVK 397
            L+ P +   LYP+  H      SQVD +NPD E+FP F        ++ PG++L+IP+ 
Sbjct: 217 ILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276

Query: 398 YWHYVRAL---DLSFSVSFWW 415
           +WH++ +L    ++ +V+FW+
Sbjct: 277 WWHHIESLLNGGITITVNFWY 297


>gi|21314714 Hspb associated protein 1 [Homo sapiens]
          Length = 488

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 28/235 (11%)

Query: 204 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG--SRYTDEEWSQTLMTVNEFISK 261
           +P I   +   WP  + W+ +Y+ ++   + +   +G  S  T  ++  T   V   + +
Sbjct: 42  QPAIFCNMVFDWPA-RHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100

Query: 262 YI--------VNEP-RD---------VGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEE 303
           ++        ++ P RD           Y     LF+   +L QD+   D+   G   +E
Sbjct: 101 FLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE 160

Query: 304 EITINAWFGPQGTISPLHQDPQQ-NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT-- 360
                 W G  G  +P H D    N + QV GRK   L+ P+++  LYP       ++  
Sbjct: 161 S---TLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVF 217

Query: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALD-LSFSVSFW 414
           S+++V NPDL++FP+F KA   +  LSPG++LF+P  +WHYV ++D ++ S++ W
Sbjct: 218 SKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272


>gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]
          Length = 1012

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 14/175 (8%)

Query: 184 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 241
           VP L +P    HF   ++ P RP I++    HWP +QKWSL Y +   G   V V V   
Sbjct: 29  VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88

Query: 242 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 290
            Y D       M   E      F+   +    +  G L  Q Q   L  ++P+L  D+ S
Sbjct: 89  GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148

Query: 291 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQE 345
              + S   G+  +  +N W G    ++ LH+D  +N    V G K+   + P +
Sbjct: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSD 202


>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
          Length = 447

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)

Query: 191 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 242
           S   F   FL+P  P +        W   ++W         +++    G   VPV     
Sbjct: 86  SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145

Query: 243 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 296
                  +  MT+ ++I+   +YI    + PR   YL    L    P ++   ++P Y S
Sbjct: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204

Query: 297 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 348
                   D  + +     + GP G+ SP H D  ++F   V V GRK   L+ P +  A
Sbjct: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264

Query: 349 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 404
           L        H     DV +P   D    P+   A P L      GE++F+P  + H V  
Sbjct: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319

Query: 405 LDLSFSVSFWW 415
           LD + S++  W
Sbjct: 320 LDDTISINHNW 330


>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
          Length = 463

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)

Query: 191 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 242
           S   F   FL+P  P +        W   ++W         +++    G   VPV     
Sbjct: 86  SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145

Query: 243 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 296
                  +  MT+ ++I+   +YI    + PR   YL    L    P ++   ++P Y S
Sbjct: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204

Query: 297 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 348
                   D  + +     + GP G+ SP H D  ++F   V V GRK   L+ P +  A
Sbjct: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264

Query: 349 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 404
           L        H     DV +P   D    P+   A P L      GE++F+P  + H V  
Sbjct: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319

Query: 405 LDLSFSVSFWW 415
           LD + S++  W
Sbjct: 320 LDDTISINHNW 330


>gi|56090146 jumonji domain containing 8 [Homo sapiens]
          Length = 285

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 22/214 (10%)

Query: 204 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYI 263
           RPVIL+G+ D+       S + +    G R V +   + Y+   + +  +   E++ + +
Sbjct: 85  RPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLSTANTYS---YHKVDLPFQEYVEQLL 141

Query: 264 -VNEPRDVG----YLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTIS 318
              +P  +G    Y      F +   L +  S P +  LG        I       G+  
Sbjct: 142 HPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLLGTAPAYSFGIAG----AGSGV 197

Query: 319 PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAK 378
           P H      +   + GRK   LY P+++   +P+ T L           P          
Sbjct: 198 PFHWHGP-GYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPPSARP------ 250

Query: 379 APFLSCILSPGEILFIPVKYWHYVRALDLSFSVS 412
              L C +  GE+L+ P ++WH    LD S  +S
Sbjct: 251 ---LECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281


>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
          Length = 414

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 35/244 (14%)

Query: 191 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQ 250
           S++ F E++  P +PV+L    + W   +KW+LE ++     R    + G    D +   
Sbjct: 55  SVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKR--KYRNQKFKCGE---DNDGYS 109

Query: 251 TLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIP---ELKQDISIPDYCS---LGDGEEEE 304
             M +  +I +Y+ +   D         + + P   +L +D  +P + +        E+ 
Sbjct: 110 VKMKMKYYI-EYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKR 168

Query: 305 ITINAWF--GPQGTISPLHQDP----QQNFLVQVMGRKYIRLY---SPQE-------SGA 348
                WF  GP  + + +H DP      N LVQ  G K   L+   +P+E        G 
Sbjct: 169 RPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQ--GHKRWCLFPTSTPRELIKVTRDEGG 226

Query: 349 LYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLS 408
               +     N      + P     P+F     L  +  PGE +F+P  +WH V  LD +
Sbjct: 227 NQQDEAITWFNVIYPRTQLPTWP--PEFKP---LEILQKPGETVFVPGGWWHVVLNLDTT 281

Query: 409 FSVS 412
            +++
Sbjct: 282 IAIT 285


>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
          Length = 403

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 35/244 (14%)

Query: 191 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQ 250
           S++ F E++  P +PV+L    + W   +KW+LE ++     R    + G    D +   
Sbjct: 55  SVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKR--KYRNQKFKCGE---DNDGYS 109

Query: 251 TLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIP---ELKQDISIPDYCS---LGDGEEEE 304
             M +  +I +Y+ +   D         + + P   +L +D  +P + +        E+ 
Sbjct: 110 VKMKMKYYI-EYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKR 168

Query: 305 ITINAWF--GPQGTISPLHQDP----QQNFLVQVMGRKYIRLY---SPQE-------SGA 348
                WF  GP  + + +H DP      N LVQ  G K   L+   +P+E        G 
Sbjct: 169 RPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQ--GHKRWCLFPTSTPRELIKVTRDEGG 226

Query: 349 LYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLS 408
               +     N      + P     P+F     L  +  PGE +F+P  +WH V  LD +
Sbjct: 227 NQQDEAITWFNVIYPRTQLPTWP--PEFKP---LEILQKPGETVFVPGGWWHVVLNLDTT 281

Query: 409 FSVS 412
            +++
Sbjct: 282 IAIT 285


>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
          Length = 641

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 14/86 (16%)

Query: 321 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAP 380
           H D  + F++Q+ GRK  R+Y P+         T  L  TS  +    DL +       P
Sbjct: 340 HYDDIEAFVLQLEGRKLWRVYRPRV-------PTEELALTSSPNFSQDDLGE-------P 385

Query: 381 FLSCILSPGEILFIPVKYWHYVRALD 406
            L  +L PG++L+ P  + H     D
Sbjct: 386 VLQTVLEPGDLLYFPRGFIHQAECQD 411


>gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo
          sapiens]
          Length = 328

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 12 LAREGTLWEALRALL--PHSKEDLKLDLGEKVERSVVTLLQRATE 54
          L  +G LWEA RAL   P S E L+LD+ +   +SV    +R TE
Sbjct: 40 LKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTE 82


>gi|34787409 hypothetical protein LOC57148 [Homo sapiens]
          Length = 1494

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 11/55 (20%)

Query: 261  KYIVNEPR-----DVG--YLAQHQLF----DQIPELKQDISIPDYCSLGDGEEEE 304
            K  V EPR     DVG  Y  +H+ F    D+IP +K D+SIPD   +   E EE
Sbjct: 1003 KLFVPEPRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEE 1057


>gi|39930351 dynamin binding protein [Homo sapiens]
          Length = 1577

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 144 ILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKLEKTVPRLHRPS 191
           I +  LP +R A    P +PCT  + + H L+ D  L+   P + RPS
Sbjct: 596 ITEQELPERRKALRPPPPRPCTPVSTSPH-LLVDQNLKPAPPLVVRPS 642


>gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens]
          Length = 464

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 19/89 (21%)

Query: 308 NAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVE 366
           N +  P G+   P H D  + F++Q+ G K+ RLY          H T  L     V+ E
Sbjct: 165 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY----------HPTVPLAREYSVEAE 214

Query: 367 NPDLEKFPKFAKAPFLSCILSPGEILFIP 395
               E+  +    P    +L PG++L+ P
Sbjct: 215 ----ERIGR----PVHEFMLKPGDLLYFP 235


>gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens]
          Length = 465

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 19/89 (21%)

Query: 308 NAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVE 366
           N +  P G+   P H D  + F++Q+ G K+ RLY          H T  L     V+ E
Sbjct: 165 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY----------HPTVPLAREYSVEAE 214

Query: 367 NPDLEKFPKFAKAPFLSCILSPGEILFIP 395
               E+  +    P    +L PG++L+ P
Sbjct: 215 ----ERIGR----PVHEFMLKPGDLLYFP 235


>gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens]
          Length = 465

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 19/89 (21%)

Query: 308 NAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVE 366
           N +  P G+   P H D  + F++Q+ G K+ RLY          H T  L     V+ E
Sbjct: 165 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY----------HPTVPLAREYSVEAE 214

Query: 367 NPDLEKFPKFAKAPFLSCILSPGEILFIP 395
               E+  +    P    +L PG++L+ P
Sbjct: 215 ----ERIGR----PVHEFMLKPGDLLYFP 235


>gi|55749600 spire homolog 2 [Homo sapiens]
          Length = 714

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 76  WEKLNTGTWQDVDKDWRRVYAIGCLLKALC 105
           ++ L    WQ V++ +  +Y+ GC+LK +C
Sbjct: 640 FQSLQGPQWQSVEEAFPHIYSHGCVLKDVC 669


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,389,776
Number of Sequences: 37866
Number of extensions: 806035
Number of successful extensions: 1810
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1784
Number of HSP's gapped (non-prelim): 24
length of query: 416
length of database: 18,247,518
effective HSP length: 105
effective length of query: 311
effective length of database: 14,271,588
effective search space: 4438463868
effective search space used: 4438463868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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