Guide to the Human Genome
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Search of human proteins with 223468681

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog
A isoform 2 [Homo sapiens]
         (548 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog ...  1119   0.0  
gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog ...  1113   0.0  
gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [H...   375   e-104
gi|35493878 reticuloendotheliosis viral oncogene homolog B [Homo...   320   3e-87
gi|117320531 nuclear factor of kappa light polypeptide gene enha...   246   5e-65
gi|117320540 nuclear factor of kappa light polypeptide gene enha...   246   5e-65
gi|117320527 nuclear factor of kappa light polypeptide gene enha...   246   5e-65
gi|34577122 nuclear factor kappa-B, subunit 1 [Homo sapiens]          234   1e-61
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    68   2e-11
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    68   2e-11
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    68   2e-11
gi|27502386 nuclear factor of activated T-cells, cytosolic compo...    62   2e-09
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca...    62   2e-09
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca...    62   2e-09
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca...    62   2e-09
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal...    62   2e-09
gi|19923350 nuclear factor of activated T-cells, cytosolic compo...    61   2e-09
gi|27502391 nuclear factor of activated T-cells, cytosolic compo...    61   2e-09
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     59   1e-08
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             59   1e-08
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    57   6e-08
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         55   1e-07
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               55   1e-07
gi|153792074 proline rich 12 [Homo sapiens]                            55   1e-07
gi|27502393 nuclear factor of activated T-cells, cytosolic compo...    55   2e-07
gi|24307909 ral guanine nucleotide dissociation stimulator isofo...    55   2e-07
gi|108796058 ral guanine nucleotide dissociation stimulator isof...    55   2e-07
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 54   4e-07
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...    52   1e-06
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...    52   1e-06

>gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog A
           isoform 2 [Homo sapiens]
          Length = 548

 Score = 1119 bits (2894), Expect = 0.0
 Identities = 548/548 (100%), Positives = 548/548 (100%)

Query: 1   MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT 60
           MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
Sbjct: 1   MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT 60

Query: 61  IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC 120
           IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
Sbjct: 61  IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC 120

Query: 121 VKKRDLEQAISQRIQTNNNPFQEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLSHPI 180
           VKKRDLEQAISQRIQTNNNPFQEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLSHPI
Sbjct: 121 VKKRDLEQAISQRIQTNNNPFQEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLSHPI 180

Query: 181 FDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQAD 240
           FDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQAD
Sbjct: 181 FDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQAD 240

Query: 241 VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK 300
           VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK
Sbjct: 241 VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK 300

Query: 301 RTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEF 360
           RTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEF
Sbjct: 301 RTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEF 360

Query: 361 PTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAP 420
           PTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAP
Sbjct: 361 PTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAP 420

Query: 421 PAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIP 480
           PAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIP
Sbjct: 421 PAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIP 480

Query: 481 VAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADMDFS 540
           VAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADMDFS
Sbjct: 481 VAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADMDFS 540

Query: 541 ALLSQISS 548
           ALLSQISS
Sbjct: 541 ALLSQISS 548


>gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog A
           isoform 1 [Homo sapiens]
          Length = 551

 Score = 1113 bits (2880), Expect = 0.0
 Identities = 548/551 (99%), Positives = 548/551 (99%), Gaps = 3/551 (0%)

Query: 1   MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT 60
           MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT
Sbjct: 1   MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPT 60

Query: 61  IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC 120
           IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC
Sbjct: 61  IKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQC 120

Query: 121 VKKRDLEQAISQRIQTNNNPFQ---EEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS 177
           VKKRDLEQAISQRIQTNNNPFQ   EEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS
Sbjct: 121 VKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLS 180

Query: 178 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS 237
           HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS
Sbjct: 181 HPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFS 240

Query: 238 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE 297
           QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE
Sbjct: 241 QADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEE 300

Query: 298 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY 357
           KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY
Sbjct: 301 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINY 360

Query: 358 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA 417
           DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA
Sbjct: 361 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA 420

Query: 418 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ 477
           VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ
Sbjct: 421 VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQ 480

Query: 478 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM 537
           GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM
Sbjct: 481 GIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPNGLLSGDEDFSSIADM 540

Query: 538 DFSALLSQISS 548
           DFSALLSQISS
Sbjct: 541 DFSALLSQISS 551


>gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [Homo
           sapiens]
          Length = 619

 Score =  375 bits (963), Expect = e-104
 Identities = 211/427 (49%), Positives = 273/427 (63%), Gaps = 28/427 (6%)

Query: 16  ASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS 75
           A  PY+EIIEQP+QRGMRFRYKCEGRSAGSIPGE STD  +T+P+I+I  Y G G VRI+
Sbjct: 5   AYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRIT 64

Query: 76  LVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQAISQRIQ 135
           LVTK+ P++PHPH+LVGKDCRDG+YEAE   +R    FQNLGI+CVKK+++++AI  RI+
Sbjct: 65  LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIK 124

Query: 136 TNNNPFQEEQR-----GDYDLNAVRLCFQVTVRDPSGR-PLRLPPVLSHPIFDNRAPNTA 189
              NPF   ++      D DLN VRLCFQV + D  G     LPPV+S+PI+DNRAPNTA
Sbjct: 125 AGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDNRAPNTA 184

Query: 190 ELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVF 249
           EL+ICRVN+N GS  GGDEIFLLCDKVQK+DIEV F    WEA+G FSQADVHRQVAIVF
Sbjct: 185 ELRICRVNKNCGSVRGGDEIFLLCDKVQKDDIEVRFVLNDWEAKGIFSQADVHRQVAIVF 244

Query: 250 RTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSI 309
           +TPPY   ++  PV V MQLRRPSD+E+SE M+F+YLPD  D +  + K+++T   F+ +
Sbjct: 245 KTPPYC-KAITEPVTVKMQLRRPSDQEVSESMDFRYLPDEKDTYGNKAKKQKTTLLFQKL 303

Query: 310 MKKSPFSG-----------PTDPRPPPRRIAVPSRSSASVPKPAPQPYP-FTSSLSTINY 357
            +    +G            T   PP     + S+S+        +P P    S+    Y
Sbjct: 304 CQDHVETGFRHVDQDGLELLTSGDPP----TLASQSAGITVNFPERPRPGLLGSIGEGRY 359

Query: 358 DEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQA 417
            +    +F     S  + +   P  V  QA +  P+P  +S+     A +  L      +
Sbjct: 360 FKKEPNLF-----SHDAVVREMPTGVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSS 414

Query: 418 VAPPAPK 424
           VA P P+
Sbjct: 415 VAHPTPR 421


>gi|35493878 reticuloendotheliosis viral oncogene homolog B [Homo
           sapiens]
          Length = 579

 Score =  320 bits (819), Expect = 3e-87
 Identities = 186/422 (44%), Positives = 245/422 (58%), Gaps = 30/422 (7%)

Query: 7   LIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGY 66
           L+ PA P     P++ I EQPKQRGMRFRY+CEGRSAGSI GE ST+ +KT P I++   
Sbjct: 114 LVSPA-PGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDC 172

Query: 67  TGPGTVRIS--LVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCI-HSFQNLGIQCVKK 123
            G   V ++  LV KD PHR HPH LVGKDC DG     L P     HSF NLGIQCV+K
Sbjct: 173 GGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRK 232

Query: 124 RDLEQAISQRIQTNNNPFQE---EQRGDYDLNAVRLCFQVTVRDPSGRPLRLPPVLSHPI 180
           +++E AI ++IQ   +P+     +   + D+N VR+CFQ + RD  G+  R+ PVLS P+
Sbjct: 233 KEIEAAIERKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPV 292

Query: 181 FDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQAD 240
           +D ++ NT+EL+ICR+N+ SG C GG+E++LLCDKVQKEDI V F+   WE R  FSQAD
Sbjct: 293 YDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQAD 352

Query: 241 VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK 300
           VHRQ+AIVF+TPPY D  +  PV V++ L+R +D   SEP+ F YLP   D + +++KRK
Sbjct: 353 VHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRK 412

Query: 301 RTYETFKSIMKKSPFSGPTDPR--PPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYD 358
           R        +  S      DP      RR   P+     +P     P+   S+L      
Sbjct: 413 RGMPDVLGELNSS------DPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSAL------ 460

Query: 359 EFPTMVFPSGQISQASALAPAPPQVLPQAPAPAP-APAMVSALAQAPAPVPVLAPGPPQA 417
             P   F SG +S      P  P +L    A  P AP + + L        +L P PP A
Sbjct: 461 -LPDPDFFSGTVSLPGLEPPGGPDLLDDGFAYDPTAPTLFTML-------DLLPPAPPHA 512

Query: 418 VA 419
            A
Sbjct: 513 SA 514


>gi|117320531 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform a [Homo sapiens]
          Length = 900

 Score =  246 bits (627), Expect = 5e-65
 Identities = 139/334 (41%), Positives = 188/334 (56%), Gaps = 28/334 (8%)

Query: 7   LIFPAEPAQ--ASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKIN 64
           ++ P EPA   A GPY+ I+EQPKQRG RFRY CEG S G +PG  S    KT+PT+KI 
Sbjct: 24  IVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKIC 83

Query: 65  GYTGPGTVRISLVTKDPPHRPHPHELVGKDCRD-GFYEAELCPDRCIHSFQNLGIQCVKK 123
            Y GP  + + LVT   P R H H LVGK C + G     + P      F NLG+  V K
Sbjct: 84  NYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTK 143

Query: 124 RDLEQAISQRIQ-----------TNNNPFQEEQRGD-----YDLNAVRLCFQVTVRDPSG 167
           +++   + Q++Q           T     + EQ         DL+ VRL F   +R   G
Sbjct: 144 KNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDG 203

Query: 168 R-PLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYF- 225
              L L PV+S PI D+++P  + LKI R+++ +GS  GGDE++LLCDKVQK+DIEV F 
Sbjct: 204 SFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFY 263

Query: 226 --TGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEF 283
                GW+A G FS  DVH+Q AIVFRTPPY    ++ PV V +QL+R    ++S+  +F
Sbjct: 264 EDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQF 323

Query: 284 QYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSG 317
            Y P  +D+  ++ KR++   TF       PF G
Sbjct: 324 TYYPLVEDKEEVQRKRRKALPTF-----SQPFGG 352


>gi|117320540 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform b [Homo sapiens]
          Length = 899

 Score =  246 bits (627), Expect = 5e-65
 Identities = 139/334 (41%), Positives = 188/334 (56%), Gaps = 28/334 (8%)

Query: 7   LIFPAEPAQ--ASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKIN 64
           ++ P EPA   A GPY+ I+EQPKQRG RFRY CEG S G +PG  S    KT+PT+KI 
Sbjct: 24  IVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKIC 83

Query: 65  GYTGPGTVRISLVTKDPPHRPHPHELVGKDCRD-GFYEAELCPDRCIHSFQNLGIQCVKK 123
            Y GP  + + LVT   P R H H LVGK C + G     + P      F NLG+  V K
Sbjct: 84  NYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTK 143

Query: 124 RDLEQAISQRIQ-----------TNNNPFQEEQRGD-----YDLNAVRLCFQVTVRDPSG 167
           +++   + Q++Q           T     + EQ         DL+ VRL F   +R   G
Sbjct: 144 KNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDG 203

Query: 168 R-PLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYF- 225
              L L PV+S PI D+++P  + LKI R+++ +GS  GGDE++LLCDKVQK+DIEV F 
Sbjct: 204 SFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFY 263

Query: 226 --TGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEF 283
                GW+A G FS  DVH+Q AIVFRTPPY    ++ PV V +QL+R    ++S+  +F
Sbjct: 264 EDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQF 323

Query: 284 QYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSG 317
            Y P  +D+  ++ KR++   TF       PF G
Sbjct: 324 TYYPLVEDKEEVQRKRRKALPTF-----SQPFGG 352


>gi|117320527 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform b [Homo sapiens]
          Length = 899

 Score =  246 bits (627), Expect = 5e-65
 Identities = 139/334 (41%), Positives = 188/334 (56%), Gaps = 28/334 (8%)

Query: 7   LIFPAEPAQ--ASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKIN 64
           ++ P EPA   A GPY+ I+EQPKQRG RFRY CEG S G +PG  S    KT+PT+KI 
Sbjct: 24  IVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKIC 83

Query: 65  GYTGPGTVRISLVTKDPPHRPHPHELVGKDCRD-GFYEAELCPDRCIHSFQNLGIQCVKK 123
            Y GP  + + LVT   P R H H LVGK C + G     + P      F NLG+  V K
Sbjct: 84  NYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTK 143

Query: 124 RDLEQAISQRIQ-----------TNNNPFQEEQRGD-----YDLNAVRLCFQVTVRDPSG 167
           +++   + Q++Q           T     + EQ         DL+ VRL F   +R   G
Sbjct: 144 KNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDG 203

Query: 168 R-PLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYF- 225
              L L PV+S PI D+++P  + LKI R+++ +GS  GGDE++LLCDKVQK+DIEV F 
Sbjct: 204 SFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFY 263

Query: 226 --TGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEF 283
                GW+A G FS  DVH+Q AIVFRTPPY    ++ PV V +QL+R    ++S+  +F
Sbjct: 264 EDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQF 323

Query: 284 QYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSG 317
            Y P  +D+  ++ KR++   TF       PF G
Sbjct: 324 TYYPLVEDKEEVQRKRRKALPTF-----SQPFGG 352


>gi|34577122 nuclear factor kappa-B, subunit 1 [Homo sapiens]
          Length = 969

 Score =  234 bits (598), Expect = 1e-61
 Identities = 139/344 (40%), Positives = 181/344 (52%), Gaps = 43/344 (12%)

Query: 6   PLIFPAEPA--QASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKI 63
           P +F  + A   A GPY++I+EQPKQRG RFRY CEG S G +PG  S    K++P +KI
Sbjct: 28  PEVFQPQMALPTADGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKI 87

Query: 64  NGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKK 123
             Y GP  V + LVT       H H LVGK C DG       P   +  F NLGI  V K
Sbjct: 88  CNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGICTVTAGPKDMVVGFANLGILHVTK 147

Query: 124 RDLEQAISQRIQT----NNNP----------FQEEQRGD--------------------- 148
           + + + +  R+        NP           Q E  GD                     
Sbjct: 148 KKVFETLEARMTEACIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAALQQTKE 207

Query: 149 YDLNAVRLCFQVTVRDPSGR-PLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGD 207
            DL+ VRL F   + D +G    RL PV+S  I+D++APN + LKI R++R +G   GG+
Sbjct: 208 MDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGE 267

Query: 208 EIFLLCDKVQKEDIEVYF-----TGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAP 262
           EI+LLCDKVQK+DI++ F      G  WE  G FS  DVHRQ AIVF+TP Y D ++  P
Sbjct: 268 EIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDINITKP 327

Query: 263 VRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETF 306
             V +QLRR SD E SEP  F Y P+  D+  ++ KR++    F
Sbjct: 328 ASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQKLMPNF 371


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 65/213 (30%), Positives = 81/213 (38%), Gaps = 39/213 (18%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQ 369
           ++++P   P+ P P P     P    A  P PAP P                        
Sbjct: 118 LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPV----------------------- 154

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAG 429
              A   AP    VL  APAPAPAPA   A   APAP P  AP P  A   PAP P  A 
Sbjct: 155 --AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA---PAPAPDAAP 209

Query: 430 EGTLSEALLQLQFDDEDLGALL--GNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTE 487
           + +  +   Q Q   E L   L  G S  PA  T  AS + +  ++L     P+      
Sbjct: 210 QESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG---PLISDFFA 266

Query: 488 PMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGL 520
                 PE  +  V      P P P+P  APG+
Sbjct: 267 KRKRSAPEKSSGDV------PAPCPSPSAAPGV 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 308 SIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYP 347
           +++  +P   P  P P P  +A P+ + A  P PAP P P
Sbjct: 165 AVLAPAPAPAPA-PAPAPAPVAAPAPAPAPAPAPAPAPAP 203


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 65/213 (30%), Positives = 81/213 (38%), Gaps = 39/213 (18%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQ 369
           ++++P   P+ P P P     P    A  P PAP P                        
Sbjct: 118 LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPV----------------------- 154

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAG 429
              A   AP    VL  APAPAPAPA   A   APAP P  AP P  A   PAP P  A 
Sbjct: 155 --AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA---PAPAPDAAP 209

Query: 430 EGTLSEALLQLQFDDEDLGALL--GNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTE 487
           + +  +   Q Q   E L   L  G S  PA  T  AS + +  ++L     P+      
Sbjct: 210 QESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG---PLISDFFA 266

Query: 488 PMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGL 520
                 PE  +  V      P P P+P  APG+
Sbjct: 267 KRKRSAPEKSSGDV------PAPCPSPSAAPGV 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 308 SIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYP 347
           +++  +P   P  P P P  +A P+ + A  P PAP P P
Sbjct: 165 AVLAPAPAPAPA-PAPAPAPVAAPAPAPAPAPAPAPAPAP 203


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 65/213 (30%), Positives = 81/213 (38%), Gaps = 39/213 (18%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQ 369
           ++++P   P+ P P P     P    A  P PAP P                        
Sbjct: 129 LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPV----------------------- 165

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAG 429
              A   AP    VL  APAPAPAPA   A   APAP P  AP P  A   PAP P  A 
Sbjct: 166 --AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA---PAPAPDAAP 220

Query: 430 EGTLSEALLQLQFDDEDLGALL--GNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTE 487
           + +  +   Q Q   E L   L  G S  PA  T  AS + +  ++L     P+      
Sbjct: 221 QESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG---PLISDFFA 277

Query: 488 PMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGL 520
                 PE  +  V      P P P+P  APG+
Sbjct: 278 KRKRSAPEKSSGDV------PAPCPSPSAAPGV 304



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 308 SIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYP 347
           +++  +P   P  P P P  +A P+ + A  P PAP P P
Sbjct: 176 AVLAPAPAPAPA-PAPAPAPVAAPAPAPAPAPAPAPAPAP 214


>gi|27502386 nuclear factor of activated T-cells, cytosolic
           component 1 isoform C [Homo sapiens]
          Length = 930

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 78/497 (15%)

Query: 17  SGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISL 76
           SGPY   IE   +   R  Y+ EG S G++           HP ++++GY     + + L
Sbjct: 410 SGPYELRIEVQPKSHHRAHYETEG-SRGAVKASAGG-----HPIVQLHGYLENEPLMLQL 463

Query: 77  ---VTKDPPHRPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQA 129
                 D   RPH     H + GK      +EA L   + +       I  + +  +   
Sbjct: 464 FIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLE------IPLLPENSMRAV 517

Query: 130 IS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPPVLSHPIFDNR 184
           I    I    N   E ++G+ D+      VRL F+V V  PSGR L L  V S+PI  ++
Sbjct: 518 IDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQ-VASNPIECSQ 576

Query: 185 APNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG------WEARGSFSQ 238
             +  EL +          + G +  +L      +D +V F          WE     + 
Sbjct: 577 R-SAQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAK-TD 634

Query: 239 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEK 298
            D+ +  ++V   PP+ +  + +PV VS  +     R+ S+   F YLP      + E  
Sbjct: 635 RDLCKPNSLVVEIPPFRNQRITSPVHVSFYVCN-GKRKRSQYQRFTYLPANVPIIKTE-- 691

Query: 299 RKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYD 358
                              PTD   P       S+  +      P P P+ S    +  D
Sbjct: 692 -------------------PTDDYEPAPTCGPVSQGLS------PLPRPYYSQQLAMPPD 726

Query: 359 EFPTMVFPSGQISQASALAPAPPQVLPQAP--APAPAPAMVSALAQAPAPVPVLAPGPPQ 416
               +V       Q S L PA P V P+    +PA     V++       +P  A   P 
Sbjct: 727 PSSCLVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPA 786

Query: 417 AVAPPAPKPTQAGE-GTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLL 475
               P P  T  G  G    ALL  Q     + A   +S  P +   L     S      
Sbjct: 787 VQDVPRPVATHPGSPGQPPPALLPQQ-----VSAPPSSSCPPGLEHSLCPSSPSP----- 836

Query: 476 NQGIPVAPHTTEPMLME 492
               P+ P T EP  ++
Sbjct: 837 ----PLPPATQEPTCLQ 849


>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 1 [Homo sapiens]
          Length = 1075

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 102/428 (23%), Positives = 166/428 (38%), Gaps = 47/428 (10%)

Query: 6   PLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKING 65
           PL +P  PA      ++I  QPK    R  Y+ EG S G++       +T  HP +K+ G
Sbjct: 419 PLDWPL-PAHFGQCELKIEVQPKTHH-RAHYETEG-SRGAVKA-----STGGHPVVKLLG 470

Query: 66  YTG-PGTVRISLVTKDPPH-RPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQ 119
           Y   P  +++ + T D  + RPH     H + GK       E        I S + L I 
Sbjct: 471 YNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEI------IIASTKVLEIP 524

Query: 120 CVKKRDLEQAIS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPP 174
            + + ++  +I    I    N   E ++G+ D+      VRL F+V +  PSG+ L L  
Sbjct: 525 LLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSL-Q 583

Query: 175 VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFT-----GPG 229
           + S P+  ++        I + + NS S  GG E+ +       E   ++        P 
Sbjct: 584 IASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQ 643

Query: 230 WEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDT 289
           WE  G   + +  +   IV   PPY +P++ A V+V   L     R+ S+   F Y P  
Sbjct: 644 WEVEGKIIR-EKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCN-GKRKKSQSQRFTYTP-- 699

Query: 290 DDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFT 349
                +  K++   E   S +   P   P   + P         S  S  +      P T
Sbjct: 700 -----VLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQT 754

Query: 350 SSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAP------APAMVSALAQA 403
            + S +     P +      +S+   + P+P    P    P P       P   + +   
Sbjct: 755 YA-SMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG 813

Query: 404 PAPVPVLA 411
           P  +P+ A
Sbjct: 814 PTCLPINA 821



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPA 342
           +  SP SGP  P+  P     PS  +AS P PA
Sbjct: 934 LASSPLSGPPSPQLQPMPYQSPSSGTASSPSPA 966


>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 4 [Homo sapiens]
          Length = 1045

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 102/428 (23%), Positives = 166/428 (38%), Gaps = 47/428 (10%)

Query: 6   PLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKING 65
           PL +P  PA      ++I  QPK    R  Y+ EG S G++       +T  HP +K+ G
Sbjct: 419 PLDWPL-PAHFGQCELKIEVQPKTHH-RAHYETEG-SRGAVKA-----STGGHPVVKLLG 470

Query: 66  YTG-PGTVRISLVTKDPPH-RPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQ 119
           Y   P  +++ + T D  + RPH     H + GK       E        I S + L I 
Sbjct: 471 YNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEI------IIASTKVLEIP 524

Query: 120 CVKKRDLEQAIS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPP 174
            + + ++  +I    I    N   E ++G+ D+      VRL F+V +  PSG+ L L  
Sbjct: 525 LLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSL-Q 583

Query: 175 VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFT-----GPG 229
           + S P+  ++        I + + NS S  GG E+ +       E   ++        P 
Sbjct: 584 IASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQ 643

Query: 230 WEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDT 289
           WE  G   + +  +   IV   PPY +P++ A V+V   L     R+ S+   F Y P  
Sbjct: 644 WEVEGKIIR-EKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCN-GKRKKSQSQRFTYTP-- 699

Query: 290 DDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFT 349
                +  K++   E   S +   P   P   + P         S  S  +      P T
Sbjct: 700 -----VLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQT 754

Query: 350 SSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAP------APAMVSALAQA 403
            + S +     P +      +S+   + P+P    P    P P       P   + +   
Sbjct: 755 YA-SMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG 813

Query: 404 PAPVPVLA 411
           P  +P+ A
Sbjct: 814 PTCLPINA 821



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPA 342
           +  SP SGP  P+  P     PS  +AS P PA
Sbjct: 934 LASSPLSGPPSPQLQPMPYQSPSSGTASSPSPA 966


>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 3 [Homo sapiens]
          Length = 1065

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 102/428 (23%), Positives = 166/428 (38%), Gaps = 47/428 (10%)

Query: 6   PLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKING 65
           PL +P  PA      ++I  QPK    R  Y+ EG S G++       +T  HP +K+ G
Sbjct: 419 PLDWPL-PAHFGQCELKIEVQPKTHH-RAHYETEG-SRGAVKA-----STGGHPVVKLLG 470

Query: 66  YTG-PGTVRISLVTKDPPH-RPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQ 119
           Y   P  +++ + T D  + RPH     H + GK       E        I S + L I 
Sbjct: 471 YNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEI------IIASTKVLEIP 524

Query: 120 CVKKRDLEQAIS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPP 174
            + + ++  +I    I    N   E ++G+ D+      VRL F+V +  PSG+ L L  
Sbjct: 525 LLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSL-Q 583

Query: 175 VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFT-----GPG 229
           + S P+  ++        I + + NS S  GG E+ +       E   ++        P 
Sbjct: 584 IASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQ 643

Query: 230 WEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDT 289
           WE  G   + +  +   IV   PPY +P++ A V+V   L     R+ S+   F Y P  
Sbjct: 644 WEVEGKIIR-EKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCN-GKRKKSQSQRFTYTP-- 699

Query: 290 DDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFT 349
                +  K++   E   S +   P   P   + P         S  S  +      P T
Sbjct: 700 -----VLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQT 754

Query: 350 SSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAP------APAMVSALAQA 403
            + S +     P +      +S+   + P+P    P    P P       P   + +   
Sbjct: 755 YA-SMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG 813

Query: 404 PAPVPVLA 411
           P  +P+ A
Sbjct: 814 PTCLPINA 821



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPA 342
           +  SP SGP  P+  P     PS  +AS P PA
Sbjct: 934 LASSPLSGPPSPQLQPMPYQSPSSGTASSPSPA 966


>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 2 [Homo sapiens]
          Length = 1068

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 102/428 (23%), Positives = 166/428 (38%), Gaps = 47/428 (10%)

Query: 6   PLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKING 65
           PL +P  PA      ++I  QPK    R  Y+ EG S G++       +T  HP +K+ G
Sbjct: 419 PLDWPL-PAHFGQCELKIEVQPKTHH-RAHYETEG-SRGAVKA-----STGGHPVVKLLG 470

Query: 66  YTG-PGTVRISLVTKDPPH-RPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQ 119
           Y   P  +++ + T D  + RPH     H + GK       E        I S + L I 
Sbjct: 471 YNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEI------IIASTKVLEIP 524

Query: 120 CVKKRDLEQAIS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPP 174
            + + ++  +I    I    N   E ++G+ D+      VRL F+V +  PSG+ L L  
Sbjct: 525 LLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSL-Q 583

Query: 175 VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFT-----GPG 229
           + S P+  ++        I + + NS S  GG E+ +       E   ++        P 
Sbjct: 584 IASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQ 643

Query: 230 WEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDT 289
           WE  G   + +  +   IV   PPY +P++ A V+V   L     R+ S+   F Y P  
Sbjct: 644 WEVEGKIIR-EKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCN-GKRKKSQSQRFTYTP-- 699

Query: 290 DDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFT 349
                +  K++   E   S +   P   P   + P         S  S  +      P T
Sbjct: 700 -----VLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQT 754

Query: 350 SSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAP------APAMVSALAQA 403
            + S +     P +      +S+   + P+P    P    P P       P   + +   
Sbjct: 755 YA-SMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG 813

Query: 404 PAPVPVLA 411
           P  +P+ A
Sbjct: 814 PTCLPINA 821



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 310 MKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPA 342
           +  SP SGP  P+  P     PS  +AS P PA
Sbjct: 934 LASSPLSGPPSPQLQPMPYQSPSSGTASSPSPA 966


>gi|19923350 nuclear factor of activated T-cells, cytosolic
           component 1 isoform B [Homo sapiens]
          Length = 825

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 108/446 (24%), Positives = 163/446 (36%), Gaps = 64/446 (14%)

Query: 17  SGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISL 76
           SGPY   IE   +   R  Y+ EG S G++           HP ++++GY     + + L
Sbjct: 423 SGPYELRIEVQPKSHHRAHYETEG-SRGAVKASAGG-----HPIVQLHGYLENEPLMLQL 476

Query: 77  ---VTKDPPHRPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQA 129
                 D   RPH     H + GK      +EA L   + +       I  + +  +   
Sbjct: 477 FIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLE------IPLLPENSMRAV 530

Query: 130 IS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPPVLSHPIFDNR 184
           I    I    N   E ++G+ D+      VRL F+V V  PSGR L L  V S+PI  ++
Sbjct: 531 IDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQ-VASNPIECSQ 589

Query: 185 APNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG------WEARGSFSQ 238
             +  EL +          + G +  +L      +D +V F          WE     + 
Sbjct: 590 R-SAQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAK-TD 647

Query: 239 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEK 298
            D+ +  ++V   PP+ +  + +PV VS  +     R+ S+   F YLP      + E  
Sbjct: 648 RDLCKPNSLVVEIPPFRNQRITSPVHVSFYVCN-GKRKRSQYQRFTYLPANVPIIKTE-- 704

Query: 299 RKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYD 358
                              PTD   P       S+  +      P P P+ S    +  D
Sbjct: 705 -------------------PTDDYEPAPTCGPVSQGLS------PLPRPYYSQQLAMPPD 739

Query: 359 EFPTMVFPSGQISQASALAPAPPQVLPQAP--APAPAPAMVSALAQAPAPVPVLAPGPPQ 416
               +V       Q S L PA P V P+    +PA     V++       +P  A   P 
Sbjct: 740 PSSCLVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPA 799

Query: 417 AVAPPAPKPTQAGE-GTLSEALLQLQ 441
               P P  T  G  G    ALL  Q
Sbjct: 800 VQDVPRPVATHPGSPGQPPPALLPQQ 825


>gi|27502391 nuclear factor of activated T-cells, cytosolic
           component 1 isoform E [Homo sapiens]
          Length = 812

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 108/446 (24%), Positives = 163/446 (36%), Gaps = 64/446 (14%)

Query: 17  SGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISL 76
           SGPY   IE   +   R  Y+ EG S G++           HP ++++GY     + + L
Sbjct: 410 SGPYELRIEVQPKSHHRAHYETEG-SRGAVKASAGG-----HPIVQLHGYLENEPLMLQL 463

Query: 77  ---VTKDPPHRPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQA 129
                 D   RPH     H + GK      +EA L   + +       I  + +  +   
Sbjct: 464 FIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLE------IPLLPENSMRAV 517

Query: 130 IS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPPVLSHPIFDNR 184
           I    I    N   E ++G+ D+      VRL F+V V  PSGR L L  V S+PI  ++
Sbjct: 518 IDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQ-VASNPIECSQ 576

Query: 185 APNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG------WEARGSFSQ 238
             +  EL +          + G +  +L      +D +V F          WE     + 
Sbjct: 577 R-SAQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAK-TD 634

Query: 239 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEK 298
            D+ +  ++V   PP+ +  + +PV VS  +     R+ S+   F YLP      + E  
Sbjct: 635 RDLCKPNSLVVEIPPFRNQRITSPVHVSFYVCN-GKRKRSQYQRFTYLPANVPIIKTE-- 691

Query: 299 RKRTYETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYD 358
                              PTD   P       S+  +      P P P+ S    +  D
Sbjct: 692 -------------------PTDDYEPAPTCGPVSQGLS------PLPRPYYSQQLAMPPD 726

Query: 359 EFPTMVFPSGQISQASALAPAPPQVLPQAP--APAPAPAMVSALAQAPAPVPVLAPGPPQ 416
               +V       Q S L PA P V P+    +PA     V++       +P  A   P 
Sbjct: 727 PSSCLVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEAPA 786

Query: 417 AVAPPAPKPTQAGE-GTLSEALLQLQ 441
               P P  T  G  G    ALL  Q
Sbjct: 787 VQDVPRPVATHPGSPGQPPPALLPQQ 812


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 44/138 (31%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 314 PFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYP---------------FTSSLSTINYD 358
           P  G T P PP      P+ ++A+ P P P P P                 ++ +T    
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPS 161

Query: 359 EFPTMVFPSGQISQASALAP----APPQVLPQA-PAPAPAPAMVSALAQAPAPVPVLAPG 413
             P    P  Q +   A  P    APP V P A P  AP PA+  A  + P P P   P 
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAV--AAREPPLPPPPQPPA 219

Query: 414 PPQAVAPPAPKPTQAGEG 431
           PPQ   PP P+P    EG
Sbjct: 220 PPQQQQPPPPQPQPPPEG 237



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 343 PQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQ 402
           P+P    + L  +        V   G IS  +A    PP+     PAP  AP    A A 
Sbjct: 64  PEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAA 123

Query: 403 APAPVPVLAPGPP------------------QAVAPPAPKPTQAG 429
           A AP P  AP PP                   A APP+P P Q G
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPG 168


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 44/119 (36%), Positives = 56/119 (47%), Gaps = 19/119 (15%)

Query: 325  PRRIAVPSRSSASVPKPAPQPYPFTSSLST---INYDEFPTMVFPSGQISQASALAPAPP 381
            P   +  + +S+S P  AP P P  +S+ST   +      ++   +  ++  SA  PAP 
Sbjct: 1820 PASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPA 1879

Query: 382  QVLPQAPA------PAPAP------AMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQA 428
               P AP       PA AP      A  SA A APAP PV AP P    APPAP  TQA
Sbjct: 1880 ASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNP----APPAPAQTQA 1934



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 69/248 (27%), Positives = 88/248 (35%), Gaps = 46/248 (18%)

Query: 296  EEKRKRTYETFKSIMKKSPFS-GPTDPRPPPRRIAVP-------SRSSASVPKPAPQPYP 347
            EE+RK+  +  +   KK+    G +     P R A         ++SSASVP  A  P P
Sbjct: 1696 EERRKKEEQVIQVWNKKNANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLP 1755

Query: 348  FTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLP---QAPAPAPAPAMVSALAQAP 404
             ++S S                   AS  AP P  + P      AP PA  +   LA   
Sbjct: 1756 PSTSASV-----------------PASTSAPLPATLTPVPASTSAPVPASTLAPVLASTS 1798

Query: 405  APVPVLAPGPPQA---VAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFT 461
            APVP     P  A   V+   P  T A   T S A             +L + + PA  T
Sbjct: 1799 APVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPT----PILASVSTPASVT 1854

Query: 462  DLASVDNSEFQQLLNQ----------GIPVAPHTTEPML-MEYPEAITRLVTGAQRPPDP 510
             LAS         L              P AP  T P +    P A   L   +   P P
Sbjct: 1855 ILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAP 1914

Query: 511  APAPLGAP 518
            AP P+ AP
Sbjct: 1915 APTPVSAP 1922



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 53/220 (24%), Positives = 79/220 (35%), Gaps = 43/220 (19%)

Query: 313  SPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQ 372
            +P S P +P PP      P+++ A   KP   P   TS  S       P++  PS Q   
Sbjct: 1917 TPVSAP-NPAPP-----APAQTQAQTHKPVQNPLQTTSQSSK---QPPPSIRLPSAQTPN 1967

Query: 373  ASALAPAPPQV-LPQAPAPAPA---------PAMVSALAQAPAPVPVLAPGPPQAVAPPA 422
             +    +   +  PQ+     A         PA+++ +++   P+    P PP   A   
Sbjct: 1968 GTDYVASGKSIQTPQSHGTLTAELWDNKVAPPAVLNDISKKLGPIS--PPQPPSVSAWNK 2025

Query: 423  PKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVA 482
            P  T  G    SE     Q    ++G      TD   F   AS  N       N+ +PV 
Sbjct: 2026 PL-TSFGSAPSSEGAKNGQESGLEIG------TDTIQFGAPASNGNE------NEVVPVL 2072

Query: 483  PHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPGLPN 522
               +   + E  E         QR   P   P+ A  LP+
Sbjct: 2073 SEKSADKIPEPKE---------QRQKQPRAGPIKAQKLPD 2103


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 51/136 (37%), Positives = 60/136 (44%), Gaps = 34/136 (25%)

Query: 321 PRPPPRRIAVPSRSSASVPKPAPQPYPFTS------SLSTINYDEFPTMVF--------- 365
           P P P    VP + + SVP P+P   P  +      S+ T+  D  P  V          
Sbjct: 228 PAPVPHSGLVPVQVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPA 287

Query: 366 ---PSGQIS-QASALAP------APPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAP--- 412
              PSG +   A A AP      APP  L QAP P  AP +V     AP P PVLAP   
Sbjct: 288 SAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLV----LAPVPTPVLAPMPA 343

Query: 413 -GPPQAVAPPA-PKPT 426
             PP A APP+ P PT
Sbjct: 344 STPPAAPAPPSVPMPT 359



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 61/213 (28%), Positives = 73/213 (34%), Gaps = 27/213 (12%)

Query: 319 TDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQIS-QASALA 377
           T+  P P  I  P+  SASVP   P  +    S+        P  V  SG +  Q +   
Sbjct: 194 TNFSPLPAPICPPAPGSASVPHSVPDAFQVPLSV--------PAPVPHSGLVPVQVATSV 245

Query: 378 PAPPQVLPQAPAPAPAPAMVSALAQAPAP--------VPVLAPGPPQAVAP---PAPKPT 426
           PAP   L   PA APAP  V  L     P        VPV A  PP    P   PAP P 
Sbjct: 246 PAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL 305

Query: 427 QAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTT 486
                    AL+Q          +L     P +    AS   +          P  P  T
Sbjct: 306 SVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAA------PAPPSVPMPT 359

Query: 487 EPMLMEYPEAITRLVTGAQRP-PDPAPAPLGAP 518
                  P   T +   A  P P P PAP+  P
Sbjct: 360 PTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTP 392



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 41/119 (34%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 313 SPFSGPTD---PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQ 369
           +P SGP     P P P  + V +   A +  P P   P      T+     PT V     
Sbjct: 289 APPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAP------TLVLAPVPTPVLAPMP 342

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQA 428
            S   A APAPP V    P P+  P     L  A AP PV AP  P  +  PAP P  A
Sbjct: 343 ASTPPA-APAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAP-TPAPIFTPAPTPMPA 399



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 71/273 (26%), Positives = 97/273 (35%), Gaps = 52/273 (19%)

Query: 323 PPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQ 382
           P P  +  P  +S     PAP   P  +   +      PT++ P+   +   A  PAP  
Sbjct: 332 PVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLI-PAFAPTPVPAPTPAPIF 390

Query: 383 VLPQAPAPAPAPAMVSA----------------LAQAPA---------PVPVLAPGPPQA 417
                P PA  PA +                   AQAPA         P  VL P  P  
Sbjct: 391 TPAPTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLV 450

Query: 418 VAPP---------APKPTQAG-EGTLSEALLQLQFDDEDLGALLGN---STDPAVFTDLA 464
             PP         A  PT  G   TL+  +L     D  L  +L +    + P  F+   
Sbjct: 451 YIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLASPELRSYPYAFSVAR 510

Query: 465 SV-DNSEFQQL----LNQGIPVAPHTTEPML--MEYPEAITRLVTGAQR------PPDPA 511
            +  +S+   L    L    P    TT+P    +  P A T LVT + +      P  PA
Sbjct: 511 PLTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSLVTASAKVLPTPQPLLPA 570

Query: 512 PAPLGAPGLPNGLLSGDEDFSSIADMDFSALLS 544
           P+   AP  P  + SG E  +    + FS L S
Sbjct: 571 PSGSSAPPHPAKMPSGTEQQTEGTSVTFSPLKS 603



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 5/114 (4%)

Query: 313 SPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQ 372
           +P S P    PP   I  P   SA     AP P P  + +        P           
Sbjct: 303 APLSVPVSA-PPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPT 361

Query: 373 ASALAPAPPQVLPQ-APAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKP 425
            S+  P+ P ++P  AP P PAP        AP P+P   P    A+   AP P
Sbjct: 362 PSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPA---AIPTSAPIP 412


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 61/216 (28%), Positives = 83/216 (38%), Gaps = 22/216 (10%)

Query: 328  IAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQIS--QASALAPAPPQVLP 385
            + VP+ + AS    AP P P  +SL          +  P   ++  Q + LAP+P   L 
Sbjct: 1548 VLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLA 1607

Query: 386  QAPAPAPAPAMVSALAQAPAPVPVLA----PGPPQAVAPPAPKPTQAGEGTLSEALLQLQ 441
              P  AP+P     LA +  PVPV+A    PG   A A P P PT     + ++ +L   
Sbjct: 1608 PLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAP 1667

Query: 442  FDDEDLGALLGNST---DPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPM-------LM 491
                 L +     T    PA+   L     S+    L  G P  P  T+ +       L+
Sbjct: 1668 V-PSPLPSPASTQTLALAPALAPTLGGSSPSQTLS-LGTGNPQGPFPTQTLSLTPASSLV 1725

Query: 492  EYPEAITRLVTGAQRPPDP----APAPLGAPGLPNG 523
              P     L  G    P      APAP  AP  P G
Sbjct: 1726 PTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVG 1761



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 59/230 (25%), Positives = 84/230 (36%), Gaps = 38/230 (16%)

Query: 321  PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEF-------------------- 360
            P P P  +  PS +   +P P P P P  +S  T+                         
Sbjct: 1647 PVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGN 1706

Query: 361  PTMVFPSGQIS--QASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAV 418
            P   FP+  +S   AS+L P P Q L  AP P   P    +L    AP P LAP  P   
Sbjct: 1707 PQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSL----APAPPLAPASPVGP 1762

Query: 419  APP---APKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDN--SEFQQ 473
            AP       P  +    L+ A +Q           LG +    +    AS  +  S+   
Sbjct: 1763 APAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASS 1822

Query: 474  LLNQG-----IPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAP 518
            L+        +PV   +  P+  + P+ +T L +G   PP  A +  G P
Sbjct: 1823 LVVSASGAAPLPVTMVSRLPVSKDEPDTLT-LRSGPPSPPSTATS-FGGP 1870



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 15/130 (11%)

Query: 307  KSIMKKSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFP 366
            K +   SP    + P   P  I+ P    +S+P PA  P P  +S          + V  
Sbjct: 1376 KLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNS------SPLASPVSS 1429

Query: 367  SGQISQASALAPAPPQVLPQAPAPAP------APAMVSALAQA--PAPVPVLAPGPPQAV 418
            +  +  +S+L  + P  LP APA AP      AP  VSA   A   +  P LAP  P A 
Sbjct: 1430 TVSVPLSSSLPISVPTTLP-APASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAP 1488

Query: 419  APPAPKPTQA 428
             PP+  P+ A
Sbjct: 1489 GPPSLAPSGA 1498



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 67/263 (25%), Positives = 97/263 (36%), Gaps = 44/263 (16%)

Query: 321  PRPPPRRIAV-PSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQI--------- 370
            P P P  ++V PS + ++ P P     P  ++         PTMV  +G +         
Sbjct: 1265 PTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVP------PTMVNNTGVVKIVVRQAPR 1318

Query: 371  ---SQASALAPAP-------PQVLPQAPAPAPA--PAMVSALAQAPAPVPVLAPGPPQAV 418
               +    LAPAP       P VL   P   P   P      A+AP P P L     + V
Sbjct: 1319 DGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLV 1378

Query: 419  APPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNSTDPAVF---TDLASVDNSEFQQLL 475
              P+P+ + +  G    A L +        +L G ++ P      + LAS  +S     L
Sbjct: 1379 HSPSPEVSASAPGA---APLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPL 1435

Query: 476  NQGIPVAPHTTEPMLMEYPEAI---TRLVTGAQRP-------PDPAPAPLGAPGLPNGLL 525
            +  +P++  TT P     P  I     L   A  P       P  AP    APG P+   
Sbjct: 1436 SSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAP 1495

Query: 526  SGDEDFSSIADMDFSALLSQISS 548
            SG    +S   +  +   S  SS
Sbjct: 1496 SGASPSASALTLGLATAPSLSSS 1518



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 16/122 (13%)

Query: 323  PPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQ 382
            P P    V + S   VP  AP   P T SL++ +    PT V      S    + PAP  
Sbjct: 1614 PSPGAAPVLASSQTPVPVMAPSSTPGT-SLASASPVPAPTPVLAP---SSTQTMLPAP-- 1667

Query: 383  VLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVA------PPAPKPTQAGEGTLSEA 436
                 P+P P+PA    LA APA  P L    P          P  P PTQ    T + +
Sbjct: 1668 ----VPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASS 1723

Query: 437  LL 438
            L+
Sbjct: 1724 LV 1725



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 321  PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTIN-YDEFPTMVFPSGQISQASALAPA 379
            PRP PR    P+ + A++P   P P      +S  N     P  + PS          P 
Sbjct: 2437 PRPAPRPRPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPS----------PP 2486

Query: 380  PPQVLPQAPAPA--PAPAMVSALAQAPAPVP--VLAPGPPQAVAPPA 422
            PP  +P   +PA  P PA     A  P P    ++ P  P  + PP+
Sbjct: 2487 PPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPS 2533



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 46/164 (28%), Positives = 60/164 (36%), Gaps = 13/164 (7%)

Query: 316  SGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASA 375
            S  T PR  P R          VP+PAP+P P  +S         P  V     IS  + 
Sbjct: 2422 STTTPPRCSPAR--------ERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPISAPNP 2473

Query: 376  LAPAPPQVLPQAPAPAPAPAMVS-ALAQAPAPVPVLAPGPPQA----VAPPAPKPTQAGE 430
            +   P  +LP  P P+  P   S A    PA  P  A  PP A    V P +P       
Sbjct: 2474 ITILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPS 2533

Query: 431  GTLSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQL 474
              +S ++  L         L   +       +LASV +SE   L
Sbjct: 2534 VPISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSL 2577



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 65/236 (27%), Positives = 83/236 (35%), Gaps = 36/236 (15%)

Query: 314  PFSGPTDPRPPPRRIAVPSRSSASVPKPA------PQPYPFTSSLSTINYDEFPTMVFPS 367
            P S P  P P    +A P  S+ SVP  +      P   P  +S         P  V  S
Sbjct: 1410 PASSPM-PIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSAS 1468

Query: 368  GQISQASALAPAPPQVLPQAPAP---APAPAMVSA------LAQAPAPVPVLAPGPPQAV 418
            G     S   P  P V+P AP P   AP+ A  SA      LA AP+      PG P  +
Sbjct: 1469 GPALLTSVTPPLAP-VVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLL 1527

Query: 419  AP-------------PAPKPTQAGEGTLSEALLQLQFDDEDLGALL--GNSTDPAVFTDL 463
            AP             PA  P       L+              +LL   +S   A+ T L
Sbjct: 1528 APTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPL 1587

Query: 464  ASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAPLGAPG 519
            A +  +  Q  +    P  P    P+L   P A    V  + + P P  AP   PG
Sbjct: 1588 APM--AAPQTAILAPSPAPPLAPLPVLAPSPGAAP--VLASSQTPVPVMAPSSTPG 1639



 Score = 36.2 bits (82), Expect = 0.080
 Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 22/125 (17%)

Query: 316  SGPTDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASA 375
            + P  P P       P+ SSAS+  PA        S+ T+     P         +Q  A
Sbjct: 1757 ASPVGPAPAHTLTLAPASSSASLLAPA--------SVQTLTLSPAPVPTL-GPAAAQTLA 1807

Query: 376  LAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGP-----PQAV----APPAPKPT 426
            LAPA      Q+PA   +  +VSA   AP PV +++  P     P  +     PP+P  T
Sbjct: 1808 LAPAS----TQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPST 1863

Query: 427  QAGEG 431
                G
Sbjct: 1864 ATSFG 1868



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 54/226 (23%), Positives = 78/226 (34%), Gaps = 37/226 (16%)

Query: 319  TDPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFP---TMVFPSGQISQASA 375
            T P PPPR   V  + +  +    P P     ++  +N    P     V P      ++ 
Sbjct: 979  TAPDPPPRPKPVKMKVNRMLQ---PVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQ 1035

Query: 376  LAPAP-PQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAGEGTLS 434
              P P PQVLP +   + +PA    +  +  P PVL P            P Q   G+L 
Sbjct: 1036 PTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLP------------PLQPNSGSLP 1083

Query: 435  EALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQ---------QLLNQGIPVAPHT 485
            + L         LG L G S  P     L     +  +           L + + V P  
Sbjct: 1084 QVL------PSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGY 1137

Query: 486  TEPMLMEYPEAITRLVTGAQRPPDPAPAP---LGAPGLPNGLLSGD 528
            T P       + T         P P PAP   + +P +   L SG+
Sbjct: 1138 TFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGE 1183


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 322 RPPPRRIAVPSRSSASVPKPA-PQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAP 380
           RP P   AV   +  S P P  P P P +  +      + P  V      +  S   P+P
Sbjct: 658 RPAPLPAAVVPSTPTSAPAPTQPAPTPTSGPIGLRILAQQPLSV------TCFSLALPSP 711

Query: 381 PQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAGEGTLSE 435
           P V   +PAPAPAP+   A AQAPA     AP  P  VA PAP  T A   +L +
Sbjct: 712 PAVAVASPAPAPAPSPAPARAQAPASARDPAPA-PAPVAGPAPASTSAPGDSLEQ 765



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 41/93 (44%)

Query: 321 PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAP 380
           P PP   +A P+      P PAP P P                         A A APA 
Sbjct: 709 PSPPAVAVASPA------PAPAPSPAP-------------------------ARAQAPAS 737

Query: 381 PQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPG 413
                + PAPAPAP         PAP    APG
Sbjct: 738 ----ARDPAPAPAP------VAGPAPASTSAPG 760


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 13/161 (8%)

Query: 274  DRELSEPMEFQYLPDTDDRHRIEEKR--KRTYETFKSIMKKSPFSGPTDPRPPPRRIAVP 331
            D EL   +E      +D+   + + R  + +  +  S +   P +GP D   P      P
Sbjct: 1367 DEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDTSTPD---GPP 1423

Query: 332  SRSSASVPKPAPQP-YPFTSSLSTIN---YDEFPTMVFPSGQISQASALAPAPPQVLPQA 387
               +A+VP P P P  P  +S  T      +E P    P     Q     P PP   PQ 
Sbjct: 1424 LAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPP---PQP 1480

Query: 388  PAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQA 428
              P+P P +V+    +P P P+  P PP   +PP P P  A
Sbjct: 1481 ALPSPPP-LVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAA 1520



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 24/202 (11%)

Query: 336 ASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAPAPAPA 395
           A + K  P P P   S     +     ++  +G       L P PPQ+LP   + AP+P+
Sbjct: 758 AFLQKSPPPPPPTAQSTQPTPHG----LLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPS 813

Query: 396 MVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAGEGTLSEALLQLQFDDEDLGALLGNST 455
             ++        P    G PQ   PP P P            LQL+      G L   + 
Sbjct: 814 PSASKVGVHLLEPATRDGAPQPPPPPPPPPPPMP--------LQLEAHLRSHG-LEPAAP 864

Query: 456 DPAVFTDLASVDNSEFQQLLN--QGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDP--- 510
            P +  + +       Q+LL   + +P AP  T    +  P +  +   GA R P P   
Sbjct: 865 SPRLRPEESLDPPGAMQELLGALEPLPPAPGDTG---VGPPNSEGKDPAGAYRSPSPQGT 921

Query: 511 -AP--APLGAPGLPNGLLSGDE 529
            AP   PL +   P+ LL  +E
Sbjct: 922 KAPRFVPLTSICFPDSLLQDEE 943



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 15/102 (14%)

Query: 320  DPRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPA 379
            + +PPP     P  +    P+P P P P   +L +      P +V P+        L P 
Sbjct: 1454 EEKPPP----TPPPAPTPQPQPPPPPPPPQPALPSP-----PPLVAPTPSSPPPPPLPPP 1504

Query: 380  PPQVLPQAPAPAP-APAMVSALAQAPAPVPVLAPGPPQAVAP 420
            PP  +P  P P P A A ++A  + PA     AP P     P
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLAAPPEEPA-----APSPEDPELP 1541



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 13/112 (11%)

Query: 325 PRRIAVPSRSSASVPK-PAP---QPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAP 380
           P     PS S+ S  + PA    +P+P  SSLS     + P    P+  +     +    
Sbjct: 137 PGSSTFPSSSALSAYQHPASFGSRPFPVPSSLSL----QDPPFSPPANGLLSPHDVLHLK 192

Query: 381 PQVLPQAPAPA-----PAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQ 427
           P   P  P+           ++      PA  P   PGPP    PP   PTQ
Sbjct: 193 PSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQ 244



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 29/113 (25%), Positives = 37/113 (32%), Gaps = 42/113 (37%)

Query: 317 GPTDPRPPPRR-------IAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQ 369
           GP DP PPPR        +A  S ++A+  + +PQ Y F                     
Sbjct: 230 GPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNF--------------------- 268

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPA 422
               S  AP PP      P     P   + +     P     P PP    PPA
Sbjct: 269 ----SGAAPGPP------PPERALPRQDTVIKHYQRPASAQPPPPP----PPA 307


>gi|27502393 nuclear factor of activated T-cells, cytosolic
           component 1 isoform A [Homo sapiens]
          Length = 716

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 73/289 (25%), Positives = 116/289 (40%), Gaps = 34/289 (11%)

Query: 17  SGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISL 76
           SGPY   IE   +   R  Y+ EG S G++           HP ++++GY     + + L
Sbjct: 423 SGPYELRIEVQPKSHHRAHYETEG-SRGAVKASAGG-----HPIVQLHGYLENEPLMLQL 476

Query: 77  ---VTKDPPHRPHP----HELVGKDCRDGFYEAELCPDRCIHSFQNLGIQCVKKRDLEQA 129
                 D   RPH     H + GK      +EA L   + +       I  + +  +   
Sbjct: 477 FIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLE------IPLLPENSMRAV 530

Query: 130 IS-QRIQTNNNPFQEEQRGDYDLNA----VRLCFQVTVRDPSGRPLRLPPVLSHPIFDNR 184
           I    I    N   E ++G+ D+      VRL F+V V  PSGR L L  V S+PI +  
Sbjct: 531 IDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSL-QVASNPI-ECS 588

Query: 185 APNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPG------WEARGSFSQ 238
             +  EL +          + G +  +L      +D +V F          WE     + 
Sbjct: 589 QRSAQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAK-TD 647

Query: 239 ADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLP 287
            D+ +  ++V   PP+ +  + +PV VS  +     R+ S+   F YLP
Sbjct: 648 RDLCKPNSLVVEIPPFRNQRITSPVHVSFYVCN-GKRKRSQYQRFTYLP 695


>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
           1 [Homo sapiens]
          Length = 914

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 321 PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASA----- 375
           P P       P+R+ + VP PAP+P P  +       +  P    P+ ++ QA       
Sbjct: 269 PTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPA---PAPELQQAPEPAVGL 325

Query: 376 -LAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAV 418
             APAP   L  AP   PAP+    L  APAPVP L P  P  V
Sbjct: 326 ESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPV 369



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 29/62 (46%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAP-PAPKPTQA 428
           +S   AL P P   L   PA AP+P  V A A  P P P  APG    VAP PAP+  QA
Sbjct: 261 LSPVPALKPTPELELALTPARAPSP--VPAPAPEPEPAPTPAPGSELEVAPAPAPELQQA 318

Query: 429 GE 430
            E
Sbjct: 319 PE 320



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 366 PSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAV---APPA 422
           P  +++   A AP+P       P PAP PA  S L  APAP P L   P  AV   + PA
Sbjct: 271 PELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPA 330

Query: 423 P 423
           P
Sbjct: 331 P 331



 Score = 38.5 bits (88), Expect = 0.016
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 379 APPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGP-PQAVAPPAP 423
           A P+ L   PA  P P +  AL  A AP PV AP P P+    PAP
Sbjct: 256 AEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAP 301


>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
           2 [Homo sapiens]
          Length = 859

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 321 PRPPPRRIAVPSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASA----- 375
           P P       P+R+ + VP PAP+P P  +       +  P    P+ ++ QA       
Sbjct: 214 PTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPA---PAPELQQAPEPAVGL 270

Query: 376 -LAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAV 418
             APAP   L  AP   PAP+    L  APAPVP L P  P  V
Sbjct: 271 ESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPV 314



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 29/62 (46%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 370 ISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAP-PAPKPTQA 428
           +S   AL P P   L   PA AP+P  V A A  P P P  APG    VAP PAP+  QA
Sbjct: 206 LSPVPALKPTPELELALTPARAPSP--VPAPAPEPEPAPTPAPGSELEVAPAPAPELQQA 263

Query: 429 GE 430
            E
Sbjct: 264 PE 265



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 366 PSGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAV---APPA 422
           P  +++   A AP+P       P PAP PA  S L  APAP P L   P  AV   + PA
Sbjct: 216 PELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPA 275

Query: 423 P 423
           P
Sbjct: 276 P 276



 Score = 38.5 bits (88), Expect = 0.016
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 379 APPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGP-PQAVAPPAP 423
           A P+ L   PA  P P +  AL  A AP PV AP P P+    PAP
Sbjct: 201 AEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAP 246


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 16/124 (12%)

Query: 318 PTDPRPPPRRIAVPSRSSASVPKPAPQ----PYPFTSSLSTINYDEFPT---MVFPSGQI 370
           P  P PPP    +   S   +P+P P+    P P  +S S       PT      P+ + 
Sbjct: 34  PPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEP 93

Query: 371 SQASALAPAPPQVLPQAPAPAPAPAMVS--------ALAQAPAPVPVLAPGPPQAVAP-P 421
           +   A  PAP      AP PAP PA  S        AL   P P P L P     +AP P
Sbjct: 94  APEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEP 153

Query: 422 APKP 425
            P+P
Sbjct: 154 TPEP 157



 Score = 37.4 bits (85), Expect = 0.036
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 12/74 (16%)

Query: 369 QISQASALAPAPPQVLPQAP---APAPAPAMVSALAQAPAPVPV--LAPGP-PQAVAPPA 422
           Q  +  A +P PP   P  P   AP PAP ++S  +  P P P   LAPGP P+A +  A
Sbjct: 15  QDGEQPAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESA 74

Query: 423 ------PKPTQAGE 430
                 P P  A E
Sbjct: 75  TELYTEPTPEPATE 88



 Score = 29.3 bits (64), Expect = 9.7
 Identities = 37/142 (26%), Positives = 45/142 (31%), Gaps = 32/142 (22%)

Query: 373 ASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKPTQAGEGT 432
           A+A   APPQ   Q PA +P P           P P   P PP A  P  P  ++A    
Sbjct: 6   AAAQGTAPPQDGEQ-PAESPEP-----------PPPWPPPPPPPAPPPAPPLLSEASPEP 53

Query: 433 LSEALLQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLME 492
           + E   +L                P    +  S   +E         P     TEP    
Sbjct: 54  IPEPCPELA---------------PGPCPEATSESATELYT-----EPTPEPATEPASEP 93

Query: 493 YPEAITRLVTGAQRPPDPAPAP 514
            PE  T         P P PAP
Sbjct: 94  APEPATEPAPEPATEPAPEPAP 115


>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
           sapiens]
          Length = 728

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 44/137 (32%), Positives = 58/137 (42%), Gaps = 18/137 (13%)

Query: 304 ETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSS--ASVPKPAPQPYPF-TSSLSTINYDEF 360
           +T + I    P   P  P PP     +PS +    SVP+P   P P  T+ +S +     
Sbjct: 475 DTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPR 534

Query: 361 PTMVFPSGQISQASALAPAPP-------QVLPQAP------APAPAPAMV-SALAQAPAP 406
           P M     ++   S +AP PP        V+P  P      AP P P +V +A   AP  
Sbjct: 535 PPMASVV-RLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPV 593

Query: 407 VPVLAPGPPQAVAPPAP 423
            PV AP P   V PP P
Sbjct: 594 APVPAPAPMPPVHPPPP 610


>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
           sapiens]
          Length = 793

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 44/137 (32%), Positives = 58/137 (42%), Gaps = 18/137 (13%)

Query: 304 ETFKSIMKKSPFSGPTDPRPPPRRIAVPSRSS--ASVPKPAPQPYPF-TSSLSTINYDEF 360
           +T + I    P   P  P PP     +PS +    SVP+P   P P  T+ +S +     
Sbjct: 540 DTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPR 599

Query: 361 PTMVFPSGQISQASALAPAPP-------QVLPQAP------APAPAPAMV-SALAQAPAP 406
           P M     ++   S +AP PP        V+P  P      AP P P +V +A   AP  
Sbjct: 600 PPMASVV-RLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPV 658

Query: 407 VPVLAPGPPQAVAPPAP 423
            PV AP P   V PP P
Sbjct: 659 APVPAPAPMPPVHPPPP 675


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,386,582
Number of Sequences: 37866
Number of extensions: 1721305
Number of successful extensions: 27003
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 1099
Number of HSP's that attempted gapping in prelim test: 12722
Number of HSP's gapped (non-prelim): 8234
length of query: 548
length of database: 18,247,518
effective HSP length: 107
effective length of query: 441
effective length of database: 14,195,856
effective search space: 6260372496
effective search space used: 6260372496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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