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Search of human proteins with 22325377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22325377 sudD suppressor of bimD6 homolog [Homo sapiens]
(519 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22325377 sudD suppressor of bimD6 homolog [Homo sapiens] 1057 0.0
gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens] 274 1e-73
gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens] 176 5e-44
gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens] 50 7e-06
gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens] 50 7e-06
gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, solubl... 37 0.033
gi|154813197 talpid3 protein [Homo sapiens] 32 1.1
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 32 1.8
gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform... 31 2.4
gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor... 31 2.4
gi|64276486 serologically defined colon cancer antigen 10 [Homo ... 31 2.4
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens] 31 2.4
gi|109150435 ankyrin repeat and zinc finger domain containing 1 ... 31 2.4
gi|109150425 ankyrin repeat and zinc finger domain containing 1 ... 31 2.4
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 31 3.1
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 31 3.1
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap... 30 4.1
gi|239753623 PREDICTED: hypothetical protein [Homo sapiens] 30 5.3
gi|239748202 PREDICTED: hypothetical protein XP_002346594 [Homo ... 30 5.3
gi|239742100 PREDICTED: hypothetical protein XP_002342435 [Homo ... 30 5.3
gi|56090620 NFKB activating protein-like [Homo sapiens] 30 5.3
gi|38492356 DNA-directed DNA polymerase delta 3 [Homo sapiens] 30 7.0
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 30 7.0
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 29 9.1
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 9.1
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 9.1
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 9.1
gi|148612857 sickle tail isoform 3 [Homo sapiens] 29 9.1
gi|148612813 sickle tail isoform 2 [Homo sapiens] 29 9.1
gi|50843820 sickle tail isoform 1 [Homo sapiens] 29 9.1
>gi|22325377 sudD suppressor of bimD6 homolog [Homo sapiens]
Length = 519
Score = 1057 bits (2733), Expect = 0.0
Identities = 519/519 (100%), Positives = 519/519 (100%)
Query: 1 MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVA 60
MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVA
Sbjct: 1 MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVA 60
Query: 61 VAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVH 120
VAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVH
Sbjct: 61 VAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVH 120
Query: 121 PYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARME 180
PYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARME
Sbjct: 121 PYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARME 180
Query: 181 NFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLL 240
NFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLL
Sbjct: 181 NFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLL 240
Query: 241 MYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFK 300
MYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFK
Sbjct: 241 MYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFK 300
Query: 301 NRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMS 360
NRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMS
Sbjct: 301 NRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMS 360
Query: 361 FIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVW 420
FIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVW
Sbjct: 361 FIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVW 420
Query: 421 LIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEAD 480
LIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEAD
Sbjct: 421 LIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEAD 480
Query: 481 FLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPLLYDE 519
FLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPLLYDE
Sbjct: 481 FLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPLLYDE 519
>gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens]
Length = 568
Score = 274 bits (701), Expect = 1e-73
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 26/438 (5%)
Query: 78 LMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYR-KVHPYEDSDSSEDEVDWQD 136
L++++++ ++D + + K K I FE+ + V+ + + ++E + D
Sbjct: 6 LLMSRVVPGQFDDADSSDSENRDLK-TVKEKDDILFEDLQDNVNENGEGEIEDEEEEGYD 64
Query: 137 TRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARMENFAPEF--QVGDGIGM 194
DD + + V KG++ G + + ++A+M A + + + I +
Sbjct: 65 DDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQT--SDSSSAKMSTPADKVLRKFENKINL 122
Query: 195 D-LKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETI 253
D L +++ V N + + + +E R+ +K + +T E+ +DP+TR++++KM+ G++ I
Sbjct: 123 DKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEI 182
Query: 254 TGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFK 313
GCISTGKE+ V+HA + E AIK++KT++ FK+RDKY+ +FRF+
Sbjct: 183 NGCISTGKEANVYHASTANGESR-----------AIKIYKTSILVFKDRDKYVSGEFRFR 231
Query: 314 DRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLK 373
+ K NPRK+++ WAEKEM NL R+ A IPCP ++L+ H+LVMSFIG D +PAP LK
Sbjct: 232 HGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLK 291
Query: 374 EVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHP 433
V+L+ + +E Y Q + MR++Y + LVHADLSE+NML+H G V++IDVSQSVE HP
Sbjct: 292 NVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHP 351
Query: 434 HGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEADFLAEIEAL----- 488
H LEFL +DC NV+ FF + V ++ RELF V+ +IT +N +L++ +
Sbjct: 352 HALEFLRKDCANVNDFFMRHSV-AVMTVRELFEFVTDPSITHENMDAYLSKAMEIASQRT 410
Query: 489 --EKMNEDHVQKNGRKAA 504
E+ ++DHV + K A
Sbjct: 411 KEERSSQDHVDEEVFKRA 428
>gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens]
Length = 327
Score = 176 bits (446), Expect = 5e-44
Identities = 88/188 (46%), Positives = 125/188 (66%), Gaps = 8/188 (4%)
Query: 324 IIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMK 383
+++ WAEKEM NL R+ A IPCP ++L+ H+LVMSFIG D +PAP LK V+L+ + +
Sbjct: 1 MVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESKAR 60
Query: 384 EAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDC 443
E Y Q + MR++Y + LVHADLSE+NML+H G V++IDVSQSVE HPH LEFL +DC
Sbjct: 61 ELYLQVIQYMRRMYQDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDC 120
Query: 444 RNVSQFFQKGGVKEALSERELFNAVSGLNITADNEADFLAEIEAL-------EKMNEDHV 496
NV+ FF + V ++ RELF V+ +IT +N +L++ + E+ ++DHV
Sbjct: 121 ANVNDFFMRHSV-AVMTVRELFEFVTDPSITHENMDAYLSKAMEIASQRTKEERSSQDHV 179
Query: 497 QKNGRKAA 504
+ K A
Sbjct: 180 DEEVFKRA 187
>gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens]
Length = 552
Score = 49.7 bits (117), Expect = 7e-06
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 33/286 (11%)
Query: 242 YKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKE-DSKVIPTE----CAIKVFKTTL 296
Y++ N+G +S+ + V + G M KE D ++ E A+K+ +
Sbjct: 73 YRLTNAGYDYLALKTLSSRQ---VVESVGNQMGVGKESDIYIVANEEGQQFALKLHRLGR 129
Query: 297 NEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHI 356
F+N K +D + + S L + R+ A KE + + P P + +H
Sbjct: 130 TSFRNL-KNKRDYHKHRHNVSWLY---LSRLSAMKEFAYMKALYERKFPVPKPIDYNRHA 185
Query: 357 LVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLW-H 415
+VM I + P ++ V E+ Y + + L+ +L + L+H D +E+N++
Sbjct: 186 VVMELI--NGYPLCQIHHV----EDPASVYDEAMELIVKLANH-GLIHGDFNEFNLILDE 238
Query: 416 AGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK---------GGVKEALSERELFN 466
+ + +ID Q V +HP+ + RD + + FF K K+ E L
Sbjct: 239 SDHITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDV 298
Query: 467 AVSGLNITADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGD 512
VS T + +AD E L + D ++ + F DG+
Sbjct: 299 EVSASGYTKEMQAD----DELLHPLGPDDKNIETKEGSEFSFSDGE 340
>gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens]
Length = 474
Score = 49.7 bits (117), Expect = 7e-06
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 33/286 (11%)
Query: 242 YKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKE-DSKVIPTE----CAIKVFKTTL 296
Y++ N+G +S+ + V + G M KE D ++ E A+K+ +
Sbjct: 73 YRLTNAGYDYLALKTLSSRQ---VVESVGNQMGVGKESDIYIVANEEGQQFALKLHRLGR 129
Query: 297 NEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHI 356
F+N K +D + + S L + R+ A KE + + P P + +H
Sbjct: 130 TSFRNL-KNKRDYHKHRHNVSWLY---LSRLSAMKEFAYMKALYERKFPVPKPIDYNRHA 185
Query: 357 LVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLW-H 415
+VM I + P ++ V E+ Y + + L+ +L + L+H D +E+N++
Sbjct: 186 VVMELI--NGYPLCQIHHV----EDPASVYDEAMELIVKLANH-GLIHGDFNEFNLILDE 238
Query: 416 AGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK---------GGVKEALSERELFN 466
+ + +ID Q V +HP+ + RD + + FF K K+ E L
Sbjct: 239 SDHITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDV 298
Query: 467 AVSGLNITADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGD 512
VS T + +AD E L + D ++ + F DG+
Sbjct: 299 EVSASGYTKEMQAD----DELLHPLGPDDKNIETKEGSEFSFSDGE 340
>gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
[Homo sapiens]
Length = 623
Score = 37.4 bits (85), Expect = 0.033
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 358 VMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAG 417
+M FI D++ AP +KE L ++ Y +H + + E + ADLS +W +
Sbjct: 233 IMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVSD 292
Query: 418 KVWLIDVSQSVEPTH----PHGLEFLFRDCRN--VSQFFQKGGVKEALSERELFN 466
K VS+++ H P+ + + +N S+ ++ +K+A++ ELFN
Sbjct: 293 KA-SYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFN 346
>gi|154813197 talpid3 protein [Homo sapiens]
Length = 1472
Score = 32.3 bits (72), Expect = 1.1
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 9 PEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVF-------PEVAV 61
P P A PS+ P + +T+ +L+ ++E + + E +F P++
Sbjct: 1129 PFPAGTKAPSPSQMPGS-DSSTLESTLSVTVTETETLDKPISEGEILFSCGQKLAPKILE 1187
Query: 62 AEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQ-LRREEKKFNGDSKVSISFENYRKVH 120
G ++T N SS L A ++ME D + Q +R KKF+ D+ +S + +N
Sbjct: 1188 DIGLYLTNLNDSLSSTLHDA--VEMEDDPPSEGQVIRMSHKKFHADAILSFAKQNQESAV 1245
Query: 121 PYEDSDSSED 130
+ SED
Sbjct: 1246 SQQAVYHSED 1255
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 31.6 bits (70), Expect = 1.8
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 18/160 (11%)
Query: 258 STGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFK--NRDKYIKDDFRFKDR 315
S G E+ + S +E+E+ K T KV T+L E K R K I + D
Sbjct: 462 SDGMETTFIDSVEDSESEEEEEGKSSETG---KVKTTSLTEKKASRRQKEIPFSYLVGDS 518
Query: 316 FSK-LNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLK-KHILVMSFIGHDQVPAPKLK 373
K L +++ E+E + Q G PC T+ L L MS H + L
Sbjct: 519 GKKKLVKHQVVHKTQEEEETAVPTSQGTGTPCLTLCLASPSKSLEMSHDEHKKHSHTNLS 578
Query: 374 ----EVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSE 409
KL E K+ ++TLH E T ADL+E
Sbjct: 579 ISTGVTKLKKTEEKK--HRTLHT-----EELTSKEADLTE 611
>gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform
[Homo sapiens]
Length = 452
Score = 31.2 bits (69), Expect = 2.4
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 75 SSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYED-SDSSEDE-- 131
S+DL L ++ EYD+ A L E+KF GD+ + E ++++ D +++ + E
Sbjct: 30 SNDLKLNPKMKEEYDKIQIADLM--EEKFPGDAGLGKLIEFFKEIPTLGDLAETLKREKL 87
Query: 132 -----VDWQDTRDDPYRPAKPVPTPKKGFIGKGKDIT 163
+ + T+ PA P TP KG + T
Sbjct: 88 KVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEET 124
>gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform
[Homo sapiens]
Length = 483
Score = 31.2 bits (69), Expect = 2.4
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 75 SSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYED-SDSSEDE-- 131
S+DL L ++ EYD+ A L E+KF GD+ + E ++++ D +++ + E
Sbjct: 30 SNDLKLNPKMKEEYDKIQIADLM--EEKFPGDAGLGKLIEFFKEIPTLGDLAETLKREKL 87
Query: 132 -----VDWQDTRDDPYRPAKPVPTPKKGFIGKGKDIT 163
+ + T+ PA P TP KG + T
Sbjct: 88 KVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEET 124
>gi|64276486 serologically defined colon cancer antigen 10 [Homo
sapiens]
Length = 472
Score = 31.2 bits (69), Expect = 2.4
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 138 RDDPYRPAKPVPTPKKG----FIGKGKDITTKHDEVVCGRKNTARMENFAPEFQ------ 187
+DDP+ + PV +KG + G+D + +HDE + G + E A + +
Sbjct: 237 KDDPHLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSAN 296
Query: 188 -VGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKA 232
G G K S L++ A +R +KK + A++A
Sbjct: 297 VKSAGEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQA 342
>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
Length = 2354
Score = 31.2 bits (69), Expect = 2.4
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 203 FNALKQHAYSEERRSARLHEKKEHSTA---EKAVDPKTRLLMYKMVNSGMLETITGCIST 259
+N L+QH +S + RS +++ T+ E+ + + Y S + T ++T
Sbjct: 15 YNNLEQHLFSAQHRSLTRQSRRQICTSSLMERFLQDVLQHHPYHCQESSSTQDETH-VNT 73
Query: 260 GKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNE 298
G S V H E+E+ED + E A + + ++E
Sbjct: 74 GSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERPSEVSE 112
>gi|109150435 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 229 AEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECA 288
A DP+ L+ + SG + + G+ SVV + +DS+ P
Sbjct: 515 APSPADPRVLSLLSAPLGSGGFTLLHAAAAAGRGSVVRLLLEAGADPTVQDSRARP-PYT 573
Query: 289 IKVFKTTLNEF-----KNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQR 341
+ K+T NEF KN D Y D+ L P R K AR QR
Sbjct: 574 VAADKSTRNEFRRFMEKNPDAY---DYNKAQVPGPLTPEMEARQATRKREQKAARRQR 628
>gi|109150425 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 229 AEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECA 288
A DP+ L+ + SG + + G+ SVV + +DS+ P
Sbjct: 515 APSPADPRVLSLLSAPLGSGGFTLLHAAAAAGRGSVVRLLLEAGADPTVQDSRARP-PYT 573
Query: 289 IKVFKTTLNEF-----KNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQR 341
+ K+T NEF KN D Y D+ L P R K AR QR
Sbjct: 574 VAADKSTRNEFRRFMEKNPDAY---DYNKAQVPGPLTPEMEARQATRKREQKAARRQR 628
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 30.8 bits (68), Expect = 3.1
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 160 KDITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSAR 219
KDI K C +K+TA + L L NH K YS + +S +
Sbjct: 22 KDIKKKVIAQHCSQKDTAELLR-------------GLSLWNHAEERQKFFKYSVDEKSDK 68
Query: 220 LHEKKEHSTAEKAVDPKTRLLMYKMVN 246
E EHST + P+ L ++ +N
Sbjct: 69 EAEVSEHSTGITHLPPEVMLSIFSYLN 95
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 30.8 bits (68), Expect = 3.1
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 160 KDITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSAR 219
KDI K C +K+TA + L L NH K YS + +S +
Sbjct: 148 KDIKKKVIAQHCSQKDTAELLR-------------GLSLWNHAEERQKFFKYSVDEKSDK 194
Query: 220 LHEKKEHSTAEKAVDPKTRLLMYKMVN 246
E EHST + P+ L ++ +N
Sbjct: 195 EAEVSEHSTGITHLPPEVMLSIFSYLN 221
>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sapiens]
Length = 4486
Score = 30.4 bits (67), Expect = 4.1
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 372 LKEVKLNSEEMKEAYYQTLHLMRQLYHEC-TLVHADLSEYNMLWHAGKVWLIDVSQSVEP 430
+KE + N++EM E QT+ L++ E V L E W+ K I V Q V P
Sbjct: 1155 VKERQSNTDEMFEPLKQTIELLKTYEQELPETVFKQLEELPEKWNNIKKVAITVKQQVAP 1214
Query: 431 THPHGLEFLFRDC 443
+ + L + C
Sbjct: 1215 LQANEVTLLRQRC 1227
>gi|239753623 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 362 IGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWL 421
+G DQ+ + LK+ K + K+ + Q+L R L + + L+ +N K +
Sbjct: 31 LGKDQLSSRTLKKTKHSEVAWKKTHLQSLEEQRNLPGQHLFL---LANHN------KDRV 81
Query: 422 IDVSQSVEPTHPHGLEFL 439
+++ + HPHGL +L
Sbjct: 82 VEILRGTVHIHPHGLSYL 99
>gi|239748202 PREDICTED: hypothetical protein XP_002346594 [Homo
sapiens]
Length = 224
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 362 IGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWL 421
+G DQ+ + LK+ K + K+ + Q+L R L + + L+ +N K +
Sbjct: 31 LGKDQLSSRTLKKTKHSEVAWKKTHLQSLEEQRNLPGQHLFL---LANHN------KDRV 81
Query: 422 IDVSQSVEPTHPHGLEFL 439
+++ + HPHGL +L
Sbjct: 82 VEILRGTVHIHPHGLSYL 99
>gi|239742100 PREDICTED: hypothetical protein XP_002342435 [Homo
sapiens]
Length = 224
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 362 IGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWL 421
+G DQ+ + LK+ K + K+ + Q+L R L + + L+ +N K +
Sbjct: 31 LGKDQLSSRTLKKTKHSEVAWKKTHLQSLEEQRNLPGQHLFL---LANHN------KDRV 81
Query: 422 IDVSQSVEPTHPHGLEFL 439
+++ + HPHGL +L
Sbjct: 82 VEILRGTVHIHPHGLSYL 99
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 5.3
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 56 FPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFEN 115
FP++ E + E T + E+ ++ ++ R ++K+ N SK
Sbjct: 143 FPQLDSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSK------- 195
Query: 116 YRKVHPYEDSDSSEDEVDWQDTRDDPYR-PAKPVPTPKKGFIGKGKDITTKHD 167
RK Y DSDS+ + D+ DD R AK KK K K+ TK +
Sbjct: 196 -RKHRKYSDSDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKE 247
>gi|38492356 DNA-directed DNA polymerase delta 3 [Homo sapiens]
Length = 466
Score = 29.6 bits (65), Expect = 7.0
Identities = 38/118 (32%), Positives = 47/118 (39%), Gaps = 23/118 (19%)
Query: 40 SEQLAKELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLML-AQMLQMEYDREYDAQLRR 98
SEQ KE ++ E+ P V+V E T + SS ++LQ E R L
Sbjct: 253 SEQAVKEEKIVEQ----PTVSVTEPKLATPAGLKKSSKKAEPVKVLQKEKKRGKRVALSD 308
Query: 99 EEKKFNGDSKVSISFENYRKVH---PYEDSDSSEDEVDWQDTRDDP--YRPAKPVPTP 151
+E K EN RK +SDSSEDEV D P Y P P P
Sbjct: 309 DETK---------ETENMRKKRRRIKLPESDSSEDEV----FPDSPGAYEAESPSPPP 353
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 13/104 (12%)
Query: 57 PEVAVAEGPFITGENIDTS-SDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKV------ 109
PE A EGP G+ + L A L++ +RE +L R + +G S
Sbjct: 185 PEPAPDEGPRRDGDPAPKRLASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAPKA 244
Query: 110 ------SISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKP 147
++ +NY K S + WQ D+P+ A P
Sbjct: 245 PRPKWPKVNGKNYPKAWQGASSGEAAGPPGWQGCPDEPWPSATP 288
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 456 KEALSERELFNAVSGLNITADN-EADFLAEIEALEKMNEDHVQKNGRKAASFLKDD 510
KE L E ++F G N E E E++N DHV ++ + SFL D
Sbjct: 3070 KEGLKETDIFVGSKGQKFLCTNSEVQHKVPAEQKEQVNPDHVPESILDSESFLSKD 3125
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 456 KEALSERELFNAVSGLNITADN-EADFLAEIEALEKMNEDHVQKNGRKAASFLKDD 510
KE L E ++F G N E E E++N DHV ++ + SFL D
Sbjct: 2999 KEGLKETDIFVGSKGQKFLCTNSEVQHKVPAEQKEQVNPDHVPESILDSESFLSKD 3054
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 456 KEALSERELFNAVSGLNITADN-EADFLAEIEALEKMNEDHVQKNGRKAASFLKDD 510
KE L E ++F G N E E E++N DHV ++ + SFL D
Sbjct: 2999 KEGLKETDIFVGSKGQKFLCTNSEVQHKVPAEQKEQVNPDHVPESILDSESFLSKD 3054
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 456 KEALSERELFNAVSGLNITADN-EADFLAEIEALEKMNEDHVQKNGRKAASFLKDD 510
KE L E ++F G N E E E++N DHV ++ + SFL D
Sbjct: 2999 KEGLKETDIFVGSKGQKFLCTNSEVQHKVPAEQKEQVNPDHVPESILDSESFLSKD 3054
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 118 KVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFI-GKGKDITTKHDEVVCGRK 174
KV EDS +SE +++ + P P P P++ ++ G G T D V GRK
Sbjct: 988 KVELSEDSPNSEQDLEKLGGKSPP----PPPPPPRRSYLPGSGLTTTRSGDVVYTGRK 1041
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 118 KVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFI-GKGKDITTKHDEVVCGRK 174
KV EDS +SE +++ + P P P P++ ++ G G T D V GRK
Sbjct: 943 KVELSEDSPNSEQDLEKLGGKSPP----PPPPPPRRSYLPGSGLTTTRSGDVVYTGRK 996
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 118 KVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFI-GKGKDITTKHDEVVCGRK 174
KV EDS +SE +++ + P P P P++ ++ G G T D V GRK
Sbjct: 1023 KVELSEDSPNSEQDLEKLGGKSPP----PPPPPPRRSYLPGSGLTTTRSGDVVYTGRK 1076
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,317,950
Number of Sequences: 37866
Number of extensions: 919138
Number of successful extensions: 3008
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2995
Number of HSP's gapped (non-prelim): 41
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.