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Search of human proteins with 115298686
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115298686 protein inhibitor of activated STAT, 3 [Homo
sapiens]
(628 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens] 1284 0.0
gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens] 691 0.0
gi|56699458 protein inhibitor of activated STAT X isoform beta [... 632 0.0
gi|27532984 protein inhibitor of activated STAT X isoform alpha ... 619 e-177
gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens] 433 e-121
gi|31543543 retinoic acid induced 17 [Homo sapiens] 95 2e-19
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 82 2e-15
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 81 3e-15
gi|4507493 thrombopoietin precursor [Homo sapiens] 39 0.011
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 37 0.042
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.055
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens] 37 0.055
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens] 37 0.055
gi|4507691 transformation/transcription domain-associated protei... 37 0.072
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 37 0.072
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 35 0.16
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 35 0.16
gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens] 35 0.16
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens] 35 0.16
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.16
gi|153792074 proline rich 12 [Homo sapiens] 35 0.16
gi|12597625 activating transcription factor 5 [Homo sapiens] 35 0.21
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 35 0.21
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 35 0.27
gi|210032580 SET domain containing 1B [Homo sapiens] 35 0.27
>gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]
Length = 628
Score = 1284 bits (3323), Expect = 0.0
Identities = 628/628 (100%), Positives = 628/628 (100%)
Query: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL
Sbjct: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
Query: 61 YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP 120
YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP
Sbjct: 61 YRRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLP 120
Query: 121 QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP 180
QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP
Sbjct: 121 QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLP 180
Query: 181 GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR 240
GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR
Sbjct: 181 GAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSR 240
Query: 241 PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS 300
PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS
Sbjct: 241 PINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHS 300
Query: 301 RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK 360
RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK
Sbjct: 301 RALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEK 360
Query: 361 KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP 420
KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP
Sbjct: 361 KPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEVCPP 420
Query: 421 PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG 480
PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG
Sbjct: 421 PGYGLDGLQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLPPTKKHCSVTSAAIPALPG 480
Query: 481 SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ 540
SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ
Sbjct: 481 SKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLDLFSFLQTESQ 540
Query: 541 HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG 600
HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG
Sbjct: 541 HYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPG 600
Query: 601 GALREGHGGPLPSGPSLTGCRSDIISLD 628
GALREGHGGPLPSGPSLTGCRSDIISLD
Sbjct: 601 GALREGHGGPLPSGPSLTGCRSDIISLD 628
>gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]
Length = 651
Score = 691 bits (1784), Expect = 0.0
Identities = 383/662 (57%), Positives = 466/662 (70%), Gaps = 45/662 (6%)
Query: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
MA+ ELK MVMS RVSELQVLLG+AGRNK GRKHELL KALHLLK+ C+P+VQMKIKEL
Sbjct: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
Query: 61 YRRRFPRKTLGPSDLSL---------LSLPPGTSP-VGSPGPLAPIPPTLLAPGTLLGPK 110
YRRRFP+K + P+DLS+ +L P T P + G A P L P +LLGPK
Sbjct: 61 YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSP---LLPVSLLGPK 117
Query: 111 REVDMHPPLPQ---PVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQ 167
E+++ P L PVHPD+ ++ LPFY++ ELI+PT+LAS +SQRF E F FALTPQ
Sbjct: 118 HELEL-PHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQ 176
Query: 168 QVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLP 227
QVQQI +S ++ G KCD+T+QVQLRFCL ETSCPQED+FPPNL VKVN K C LPGYLP
Sbjct: 177 QVQQISSSMDI-SGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLP 235
Query: 228 PTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQ 287
PTKNG EPKRPSRPINIT L RLS TVPNTIVV+W++E GRNYS++VYLV+QL++ LLQ
Sbjct: 236 PTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQ 295
Query: 288 KLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQ 347
+LRAKGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSL+CPLGKMRLT+PCRALTC+HLQ
Sbjct: 296 RLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQ 355
Query: 348 SFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCP 407
FDA LY+QMNEKKPTW CPVCDKKAPYE LIIDGLFMEIL C+DCDEIQF EDG+W P
Sbjct: 356 CFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAP 415
Query: 408 MKPKKEASEVCPPPGYGLDG-----LQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLP 462
M+ KKE EV G+DG L++ S KKVEVIDLTI+SSSDEE+
Sbjct: 416 MRSKKEVQEVSASYN-GVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEE 474
Query: 463 PT-KKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAF- 520
P+ K+ C S P +KG+L+ HQ S V R+P++ + ++++ + +Y F
Sbjct: 475 PSAKRTCPSLSPTSPL--NNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFH 532
Query: 521 --PLGADIQGLDLFSFLQTESQHYGPSVITSL-----DEQDAL--GHFFQYRGTPSHFLG 571
P+ D+QGLD F FL ++QHY S++ + D+QD L FF Y + FL
Sbjct: 533 MTPMPYDLQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSS-QMFLD 591
Query: 572 PLAPTLGSSHCSATPAPPPGRVSSIVAPGGALREGHGGPLPS-----GPSLTGCRSDIIS 626
L+ GS+ T G SS+V+ +LRE H + + S+ G DIIS
Sbjct: 592 QLSAG-GSTSLPTTNGSSSGSNSSLVS-SNSLRESHSHTVTNRSSTDTASIFGIIPDIIS 649
Query: 627 LD 628
LD
Sbjct: 650 LD 651
>gi|56699458 protein inhibitor of activated STAT X isoform beta
[Homo sapiens]
Length = 621
Score = 632 bits (1630), Expect = 0.0
Identities = 343/579 (59%), Positives = 416/579 (71%), Gaps = 36/579 (6%)
Query: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
MA+ EL++MV SFRVSELQVLLGFAGRNKSGRKH+LL +ALHLLKS C+P+VQ+KI+EL
Sbjct: 1 MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60
Query: 61 YRRRFPRKTLGPSDLSLL-----SLPPGTSPVGSPGPLAPI---PPTLLAPGTLLGPKRE 112
YRRR+PR G SDLS + SL G+SPV +A I P T + P + P
Sbjct: 61 YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120
Query: 113 VDMH------------PPLPQPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHF 160
V + PP+P PVHPDV +K LPFY+V LI+PT+L +S QRF+E F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIP-PVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFF 179
Query: 161 TFALTPQQVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLC 220
FALTPQQV++I SR+ LPG + DYT+QVQLR CL ETSCPQED +P +L +KVNGKL
Sbjct: 180 IFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLF 239
Query: 221 PLPGYLPPTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQL 280
PLPGY PP KNG E KRP RP+NIT L RLS+ VPN I ++W+SE G+NYS+SVYLVRQL
Sbjct: 240 PLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQL 299
Query: 281 TAGTLLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRA 340
T+ LLQ+L+ KGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSLMCPLGKMRLT+PCRA
Sbjct: 300 TSAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRA 359
Query: 341 LTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFM 400
+TC HLQ FDAALYLQMNEKKPTW CPVCDKKA YESLI+DGLFMEIL+ CSD DEI+F
Sbjct: 360 VTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQ 419
Query: 401 EDGSWCPMKPKKEASEVCPPPGYGLD--GLQYSPVQGGDPSE-NKKKVEVIDLTIESSSD 457
EDGSWCPM+PKKEA +V P ++ + P SE +KKKV+VIDLTIESSSD
Sbjct: 420 EDGSWCPMRPKKEAMKVSSQPCTKIESSSVLSKPCSVTVASEASKKKVDVIDLTIESSSD 479
Query: 458 EEDLPPTKKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLS------SL 511
EE+ PP K+ C S + +KGVL +QPSSV R P++ ++ + S+
Sbjct: 480 EEEDPPAKRKCIFMSETQSS--PTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSLTDYSV 534
Query: 512 PLHEYPPAFPLGADIQGLDLFSFLQTESQHYGPSVITSL 550
P H + P + +D+ GLD S + + Q+ P + SL
Sbjct: 535 PFH-HTPISSMSSDLPGLDFLSLIPVDPQYCPPMFLDSL 572
>gi|27532984 protein inhibitor of activated STAT X isoform alpha
[Homo sapiens]
Length = 572
Score = 619 bits (1597), Expect = e-177
Identities = 336/557 (60%), Positives = 405/557 (72%), Gaps = 36/557 (6%)
Query: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
MA+ EL++MV SFRVSELQVLLGFAGRNKSGRKH+LL +ALHLLKS C+P+VQ+KI+EL
Sbjct: 1 MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60
Query: 61 YRRRFPRKTLGPSDLSLL-----SLPPGTSPVGSPGPLAPI---PPTLLAPGTLLGPKRE 112
YRRR+PR G SDLS + SL G+SPV +A I P T + P + P
Sbjct: 61 YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120
Query: 113 VDMH------------PPLPQPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHF 160
V + PP+P PVHPDV +K LPFY+V LI+PT+L +S QRF+E F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIP-PVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFF 179
Query: 161 TFALTPQQVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLC 220
FALTPQQV++I SR+ LPG + DYT+QVQLR CL ETSCPQED +P +L +KVNGKL
Sbjct: 180 IFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLF 239
Query: 221 PLPGYLPPTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQL 280
PLPGY PP KNG E KRP RP+NIT L RLS+ VPN I ++W+SE G+NYS+SVYLVRQL
Sbjct: 240 PLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQL 299
Query: 281 TAGTLLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRA 340
T+ LLQ+L+ KGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSLMCPLGKMRLT+PCRA
Sbjct: 300 TSAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRA 359
Query: 341 LTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFM 400
+TC HLQ FDAALYLQMNEKKPTW CPVCDKKA YESLI+DGLFMEIL+ CSD DEI+F
Sbjct: 360 VTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQ 419
Query: 401 EDGSWCPMKPKKEASEVCPPPGYGLD--GLQYSPVQGGDPSE-NKKKVEVIDLTIESSSD 457
EDGSWCPM+PKKEA +V P ++ + P SE +KKKV+VIDLTIESSSD
Sbjct: 420 EDGSWCPMRPKKEAMKVSSQPCTKIESSSVLSKPCSVTVASEASKKKVDVIDLTIESSSD 479
Query: 458 EEDLPPTKKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLS------SL 511
EE+ PP K+ C S + +KGVL +QPSSV R P++ ++ + S+
Sbjct: 480 EEEDPPAKRKCIFMSETQSS--PTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSLTDYSV 534
Query: 512 PLHEYPPAFPLGADIQG 528
P H + P + +D+ G
Sbjct: 535 PFH-HTPISSMSSDLPG 550
>gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]
Length = 510
Score = 433 bits (1113), Expect = e-121
Identities = 243/515 (47%), Positives = 322/515 (62%), Gaps = 47/515 (9%)
Query: 2 AELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKELY 61
AEL E K+MVMSFRVS+LQ+LLGF GR+KSG KHEL+ +AL L++ C+P + KIKELY
Sbjct: 3 AELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKELY 62
Query: 62 RRRFPRKTLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPK---REVDMHPP 118
R+ +K P+ L P T + +P T LA + P + ++
Sbjct: 63 ETRYAKKNSEPAPQPHRPLDPLTMH-STYDRAGAVPRTPLAGPNIDYPVLYGKYLNGLGR 121
Query: 119 LP-QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSRE 177
LP + + P+V + LPF+ + EL++PT L ++++ +E+ FALTP+QV+ I SRE
Sbjct: 122 LPAKTLKPEVRLVKLPFFNMLDELLKPTELVPQNNEKLQESPCIFALTPRQVELIRNSRE 181
Query: 178 VLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKR 237
+ PG K +QV LR C +TSCPQED +PPN+ VKVN C +PGY P K G EPKR
Sbjct: 182 LQPGVKA---VQVVLRICYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEPKR 238
Query: 238 PSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNP 297
P RPIN+T L LS+ N I V W + +G++YS+++YLVRQLT+ LLQ+L+ G+++P
Sbjct: 239 PCRPINLTHLMYLSSAT-NRITVTWGN-YGKSYSVALYLVRQLTSSELLQRLKTIGVKHP 296
Query: 298 DHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQM 357
+ +AL+KEKL DPDSE+ATT +RVSL+CPL KMRL+VPCRA TCAHLQ FDA YLQM
Sbjct: 297 ELCKALVKEKLRLDPDSEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQM 356
Query: 358 NEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCPMKPKKEASEV 417
NEKKPTW CPVCDK APY+ LIIDGL +ILS C D DEI+++ DGSWCP++ +KE S
Sbjct: 357 NEKKPTWMCPVCDKPAPYDQLIIDGLLSKILSECEDADEIEYLVDGSWCPIRAEKERS-- 414
Query: 418 CPPPGYGL-------DGLQYSP----------VQGGDP----SENKKKVEVIDLTIESSS 456
C P G L +GL +P GG P K +V+DLT++SSS
Sbjct: 415 CSPQGAILVLGPSDANGLLPAPSVNGSGALGSTGGGGPVGSMENGKPGADVVDLTLDSSS 474
Query: 457 DEEDL--------------PPTKKHCSVTSAAIPA 477
ED P K+ C +PA
Sbjct: 475 SSEDEEEEEEEEEDEDEEGPRPKRRCPFQKGLVPA 509
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 94.7 bits (234), Expect = 2e-19
Identities = 126/542 (23%), Positives = 201/542 (37%), Gaps = 81/542 (14%)
Query: 81 PPGTSPVG----SPGPLAPIPPTLLAPGTLLGP--KREVDMHPPLPQPVHPDVTMKPLP- 133
PP PV SP P P PP + PG+ + P D+ PP P + P+++ P P
Sbjct: 498 PPRPVPVANYPHSPVPGNPTPP--MTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPP 555
Query: 134 ----------FYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLPGAK 183
F G ++ P L ++ F L P Q ++ ++ K
Sbjct: 556 ANHNDELRLTFPVRDGVVLEPFRL----EHNLAVSNHVFHLRPTVHQTLMWRSDLELQFK 611
Query: 184 CDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPIN 243
C + Q+ +P ++ V VN P T + K +P++
Sbjct: 612 CYHHEDRQMN-----------TNWPASVQVSVNAT--------PLTIERGDNKTSHKPLH 652
Query: 244 ITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRAL 303
+ + + NTI + ++ ++ + LV + + ++LQ L K + +H
Sbjct: 653 LKHVCQPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITK 708
Query: 304 IKEKL----------TADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAAL 353
IK T + + V T+++VSL CP+ R+ +P R C H+Q FD
Sbjct: 709 IKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLES 768
Query: 354 YLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSC--SDCDEIQFMEDGSWCPMKPK 411
YLQ+N ++ TW CPVC+K A E L +D IL++ S+ +E+ SW P+ K
Sbjct: 769 YLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIK 828
Query: 412 KEASEVCPPPGYGLDGLQYSPVQGGDPSEN-KKKVEVIDLTIESSSDEEDLPPTKKHCSV 470
+ P DG+ + PS+ V + + LPP +
Sbjct: 829 SDLHIKDDP-----DGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNS 883
Query: 471 TSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGLD 530
+ S+G GH GT DF+ P +PP P
Sbjct: 884 NDYS------SQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKP 937
Query: 531 LFSFLQTESQHYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPPP 590
L +Q H G S Q L H P + + H S P PPP
Sbjct: 938 LSHPMQETMPHAGSSDQPHPSIQQGL-----------HVPHPSSQSGPPLHHSGAPPPPP 986
Query: 591 GR 592
+
Sbjct: 987 SQ 988
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 81.6 bits (200), Expect = 2e-15
Identities = 97/361 (26%), Positives = 149/361 (41%), Gaps = 51/361 (14%)
Query: 103 PGTLLGPKREVDMHPPLPQPVHPDVTMKP---LPFYEVYGELIRP---------TTLAST 150
PG L GP R + +P P P +P M P +P+ E+ P +L S+
Sbjct: 353 PG-LSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSS 411
Query: 151 SSQR--FEEAHFTF------ALTPQQVQQILT-SREVLPGAKCDYTIQV-----QLRF-C 195
S +E TF L P ++Q L S V Y + +L+F C
Sbjct: 412 PSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKC 471
Query: 196 LCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPINITPLARLSATVP 255
+P ++ V VN P T + K +P+ + + +
Sbjct: 472 YHHEDRQMNTNWPASVQVSVNAT--------PLTIERGDNKTSHKPLYLKHVCQPGR--- 520
Query: 256 NTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRALIKEKL------- 308
NTI + ++ ++ + LV + + ++LQ L K + +H IK
Sbjct: 521 NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPG 579
Query: 309 TADPDSE--VATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTC 366
T P+ E V T+++VSL CP+ R+ +P R C H+Q FD YLQ+N ++ TW C
Sbjct: 580 TPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRC 639
Query: 367 PVCDKKAPYESLIIDGLFMEIL--SSCSDCDEIQFMEDGSWCPMKPKKEASEVCPPPGYG 424
PVC+K A E L +D + IL SD +EI SW P+ K + P G
Sbjct: 640 PVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPA 699
Query: 425 L 425
L
Sbjct: 700 L 700
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 81.3 bits (199), Expect = 3e-15
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 276 LVRQLTAGTLLQKLRAKGIRNPDHSRALIKEKL-------TADPDSE--VATTSLRVSLM 326
LV + + ++LQ L K + +H IK T P+ E V T+++VSL
Sbjct: 514 LVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLK 573
Query: 327 CPLGKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFME 386
CP+ R+ +P R C H+Q FD YLQ+N ++ TW CPVC+K A E L +D +
Sbjct: 574 CPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLG 633
Query: 387 IL--SSCSDCDEIQFMEDGSWCPMKPKKEASEVCPPPGYGL 425
IL SD +EI SW P+ K + P G L
Sbjct: 634 ILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPAL 674
>gi|4507493 thrombopoietin precursor [Homo sapiens]
Length = 353
Score = 39.3 bits (90), Expect = 0.011
Identities = 36/98 (36%), Positives = 41/98 (41%), Gaps = 28/98 (28%)
Query: 51 PSVQMKIKELY---RRRFP---RKTLGPSDLS-----LLSLPPGTSPVGSPGP------- 92
P +I EL R FP R+TLG D+S SLPP P SP P
Sbjct: 244 PGYLNRIHELLNGTRGLFPGPSRRTLGAPDISSGTSDTGSLPPNLQPGYSPSPTHPPTGQ 303
Query: 93 --LAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
L P+PPTL P V +HP LP P P T
Sbjct: 304 YTLFPLPPTL--------PTPVVQLHPLLPDPSAPTPT 333
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 37.4 bits (85), Expect = 0.042
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 580 SHCSATPAPPPGRVSSIVAPGGALREGHGGPLPSG----PSLTGCRS 622
+HCSA+P P PG S +PG +G G P S PS GCRS
Sbjct: 668 THCSASPEPGPGSTGSSESPGS---QGPGSPEGSAPLEPPSQQGCRS 711
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.0 bits (84), Expect = 0.055
Identities = 67/261 (25%), Positives = 99/261 (37%), Gaps = 35/261 (13%)
Query: 71 GPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPD-VTM 129
GP L L G P G P P PP L+ G +LGP V PP P P +
Sbjct: 4268 GPQTGPLQELGAGPRPQGPPR--LPAPPGALSTGPVLGP---VHPTPPPSSPQEPKRPSQ 4322
Query: 130 KPLPFYEVYGELIRPTTLASTSSQR---FEEAHFTFALTPQQVQQILTSREVLPGAKCDY 186
P P ++ E P T T + E + Q+ L S+ + P D
Sbjct: 4323 LPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGPWDPPDN 4382
Query: 187 TIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYL--------PPTKNGAEPKRP 238
L ET P++ P +VNG++ P L P GA+ +
Sbjct: 4383 ---------LAETQKPEQSSLVPGHLDQVNGQVVPEASQLSIKQEPREEPCALGAQSVK- 4432
Query: 239 SRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVR----QLTAGTLLQKLRAKGI 294
R N P+ T + ++ SE G + L L+R QL+ G + LRA+
Sbjct: 4433 -REANGEPIG-APGTSNHLLLAGPRSEAG--HLLLQKLLRAKNVQLSTGRGSEGLRAEIN 4488
Query: 295 RNPDHSRALIKEKLTADPDSE 315
+ D A +++KL P ++
Sbjct: 4489 GHIDSKLAGLEQKLQGTPSNK 4509
Score = 33.9 bits (76), Expect = 0.46
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
Query: 71 GPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHP------PLPQPVH 124
G LS L P S G P PL+P+P L L P E + P PLP P+
Sbjct: 887 GEPSLSPLLGEPALSEPGEP-PLSPLPEELP-----LSPSGEPSLSPQLMPPDPLPPPLS 940
Query: 125 PDVTMKPLPFYEVYGELIRP 144
P +T P GEL P
Sbjct: 941 PIITAAAPPALSPLGELEYP 960
Score = 33.5 bits (75), Expect = 0.61
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 72 PSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKP 131
P + S LS PP SP+ P +P P +P L P E P L P+ P P
Sbjct: 488 PLEESPLSPPPEESPLSPPPESSPFSPLEESP---LSPPEESPPSPALETPLSPPPEASP 544
Query: 132 L--PFYE 136
L PF E
Sbjct: 545 LSPPFEE 551
Score = 30.4 bits (67), Expect = 5.1
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 74 DLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGT--LLGPKREVDMHPPLPQPV 123
D+ LS PP P P PLAP P +P T L+ E PP+P P+
Sbjct: 4902 DVRQLSAPPPEEPSPPPSPLAPSP---ASPPTEPLVELPTEPLAEPPVPSPL 4950
>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
Length = 443
Score = 37.0 bits (84), Expect = 0.055
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 58 KELYRRRFPRKTLGPSDLSLLSLPPGTSPVG-SPGPL--APIPPTLLAPGTLLGPKREVD 114
KELYR+R ++ P ++ LP T + P PL P P + L PG + G E D
Sbjct: 314 KELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGG---EYD 370
Query: 115 MHPPLPQPVHPDVTMKPLP 133
P LP P ++ P P
Sbjct: 371 QRPTLPYVGDPISSLIPGP 389
>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
Length = 522
Score = 37.0 bits (84), Expect = 0.055
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 58 KELYRRRFPRKTLGPSDLSLLSLPPGTSPVG-SPGPL--APIPPTLLAPGTLLGPKREVD 114
KELYR+R ++ P ++ LP T + P PL P P + L PG + G E D
Sbjct: 393 KELYRKRHIQRKESPKGRFVMLLPSSTHTIPFYPNPLHPRPFPSSRLPPGIIGG---EYD 449
Query: 115 MHPPLPQPVHPDVTMKPLP 133
P LP P ++ P P
Sbjct: 450 QRPTLPYVGDPISSLIPGP 468
>gi|4507691 transformation/transcription domain-associated protein
[Homo sapiens]
Length = 3830
Score = 36.6 bits (83), Expect = 0.072
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 25/116 (21%)
Query: 30 KSGRKHELLAKALHLLKSSCAPSVQMKIKELYRRRFPRKTLGPSDLSLLSLP-----PGT 84
+SG ++L + L + + ++ ++++ P+ LG + +L +P PG
Sbjct: 437 ESGNGRDVLMRMLEVFVLKFHTIARYQLSAIFKKCKPQSELGAVEAALPGVPTAPAAPGP 496
Query: 85 SPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLPFYEVYGE 140
+P +P P AP PP PP P P P VT P+P +E GE
Sbjct: 497 APSPAPVP-APPPP------------------PPPPPPATP-VTPAPVPPFEKQGE 532
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 36.6 bits (83), Expect = 0.072
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 86 PVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDV 127
P G PGP+ P P + PG + GP DMHP + +HPD+
Sbjct: 605 PGGPPGPMGP-GPNMGPPGPMGGPMHP-DMHPDMHPDMHPDM 644
Score = 32.7 bits (73), Expect = 1.0
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 54 QMKIKELYRRRFPRKTLGPSDLSLLSLPPG-------TSPVGSP---GPLAPIPPTLLAP 103
+ +++EL ++ P + LL PP TSP G P GP P PP P
Sbjct: 493 EKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPP 552
Query: 104 GTLLGPKREVDMHPPL-PQPV-HPDVTMKPLPFYEVYGELIRPT-TLASTSSQRF 155
G P+ + +H PL PQ + D+ K +P ++ ++RPT LA RF
Sbjct: 553 GP---PQMPMPVHEPLSPQQLQQQDMYNKKIP--SLFEIVVRPTGQLAEKLGVRF 602
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 69 TLGPSDLSLLSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVT 128
TL P +S PG P PGP P PP P + GP +M PP P V P +
Sbjct: 219 TLPPPSVSATGPGPGPGPGPGPGP-GPAPPNYSRPHGMGGP----NMPPPGPSGVPPGMP 273
Query: 129 MKP 131
+P
Sbjct: 274 GQP 276
>gi|21040334 B-cell CLL/lymphoma 11B isoform 1 [Homo sapiens]
Length = 894
Score = 35.4 bits (80), Expect = 0.16
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 439 SENKKKVEVIDLTIESSSDEED--LPPTKKHC----SVTSAAIPA-LPGSKGVLTSGHQP 491
SE +K E +++ I+ + DE+D L PTK C ++ PA LP + S H
Sbjct: 104 SELRKVSEPVEIGIQVTPDEDDHLLSPTKGICPKQENIAGPCRPAQLPAVAPIAASSHPH 163
Query: 492 SSVLRSP--AMGTLGGDFLSSLPLHEYPPAFPL 522
SSV+ SP A+G L PP PL
Sbjct: 164 SSVITSPLRALGAL-------------PPCLPL 183
>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
Length = 1185
Score = 35.4 bits (80), Expect = 0.16
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 560 FQYRGTPSHFLGPLAPTLGSSHCSATPAPPPGRVSSIVAPGGALREGHGGPLPSGPSLTG 619
FQYRG P G G+S P PPPG + + G + G L +G G
Sbjct: 115 FQYRGGPG--AGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGAAG 172
Query: 620 C 620
C
Sbjct: 173 C 173
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 35.4 bits (80), Expect = 0.16
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 31 SGRKHELLAKALHLLKSSCAPSVQM-KIKELYRRRFPRKTLGPSDLSL--LSLPPGTSPV 87
S R+HE++ KA LK Q+ K+K+ L P + L S PG P
Sbjct: 1449 SQRQHEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYP- 1507
Query: 88 GSPGPLAPIPPTLLAPGTLLGP-----KREVDM-HPPLPQPVHPDVTMKPLPFYEVYGEL 141
PG P PP PG+++ P + V + PP+P P P P P +
Sbjct: 1508 -PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPP-----PPV 1561
Query: 142 IRPTTLASTSSQRFEEAHF 160
I+P T ++ +R++E F
Sbjct: 1562 IKPQT-SAVEQERWDEDSF 1579
Score = 30.8 bits (68), Expect = 3.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 66 PRKTLGPSDLSLLSLPPGTSPVG----SPGPLAPIPPTLLA-PGTLLGPKREVDMHPPLP 120
P L P LS PP P +P P+ P+PP A P + P P +P
Sbjct: 587 PPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPP-------PGVP 639
Query: 121 QPVHPDVTMKPLP 133
Q + P +T P+P
Sbjct: 640 QGIPPQLTAAPVP 652
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 35.4 bits (80), Expect = 0.16
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 81 PPGTSPVGSPGPLAPIP-PTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLP 133
PP +P P P P P P L +P L+ P PPLP P P + P P
Sbjct: 1462 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 1515
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 35.0 bits (79), Expect = 0.21
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 14/61 (22%)
Query: 80 LPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMH-------PPLPQPVHPDVTMKPL 132
LPPGT P SP PP L A +LL K+E++ PPLP P P + PL
Sbjct: 83 LPPGTLPQPSP-----TPPDLEAMASLL--KKELEQMEDFFLDAPPLPPPSPPPLPPPPL 135
Query: 133 P 133
P
Sbjct: 136 P 136
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 35.0 bits (79), Expect = 0.21
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 81 PPGTSPVGSPGPLAPI----PPTLLAPGTLLGPKR-------EVDMHPPLPQPVHPDVTM 129
PP SP+G PGP+ P PP L+ P GP R + PP P P P
Sbjct: 356 PPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPR 415
Query: 130 KPL 132
PL
Sbjct: 416 GPL 418
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 34.7 bits (78), Expect = 0.27
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 82 PGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPP 118
P P G PGP P PP + P L GP D PP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPP 275
Score = 33.9 bits (76), Expect = 0.46
Identities = 18/47 (38%), Positives = 19/47 (40%)
Query: 81 PPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDV 127
PP P PGP P PP L P L P + PP P P V
Sbjct: 311 PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV 357
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 34.7 bits (78), Expect = 0.27
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 78 LSLPPGTSPVGSPGPLAPIPPTLLAPGTLLGPKREVDMHPPLPQPVHPDVTMKPLP 133
L LPP P G P P PP PG + P + PP P P HP VT+ P P
Sbjct: 679 LPLPP---PPGFPPLPPPPPPPPPQPGFPMPP--PLPPPPPPPPPAHPAVTVPPPP 729
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,097,561
Number of Sequences: 37866
Number of extensions: 1753570
Number of successful extensions: 9301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 8628
Number of HSP's gapped (non-prelim): 867
length of query: 628
length of database: 18,247,518
effective HSP length: 108
effective length of query: 520
effective length of database: 14,157,990
effective search space: 7362154800
effective search space used: 7362154800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.