BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|22027496 SPANX family, member E [Homo sapiens] (97 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|22027496 SPANX family, member E [Homo sapiens] 195 7e-51 gi|14192939 SPANX family, member D [Homo sapiens] 191 8e-50 gi|14192937 sperm protein associated with the nucleus, X chromos... 184 1e-47 gi|22027489 sperm protein associated with the nucleus, X chromos... 184 1e-47 gi|13435137 sperm protein associated with the nucleus, X chromos... 181 1e-46 gi|14196344 SPANX family, member B1 [Homo sapiens] 150 2e-37 gi|22027492 sperm protein associated with the nucleus, X chromos... 150 2e-37 gi|190570192 SPANX family, member F1 [Homo sapiens] 149 4e-37 gi|57634514 SPANX-N2 protein [Homo sapiens] 62 1e-10 gi|58801563 SPANX-N3 protein [Homo sapiens] 60 5e-10 gi|57528121 SPANX-N1 protein [Homo sapiens] 57 4e-09 gi|57528144 SPANX family, member N5 [Homo sapiens] 57 4e-09 gi|224586880 Ras protein-specific guanine nucleotide-releasing f... 33 0.064 gi|24797099 Ras protein-specific guanine nucleotide-releasing fa... 33 0.064 gi|24797101 Ras protein-specific guanine nucleotide-releasing fa... 33 0.064 gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 29 0.92 gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] 29 0.92 gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] 29 0.92 gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H... 28 1.2 gi|4885075 atonal homolog 1 [Homo sapiens] 28 2.1 gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 27 2.7 gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 27 3.5 gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 27 3.5 gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 27 3.5 gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 27 3.5 gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 27 3.5 gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 27 3.5 gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 27 3.5 gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 27 3.5 >gi|22027496 SPANX family, member E [Homo sapiens] Length = 97 Score = 195 bits (495), Expect = 7e-51 Identities = 97/97 (100%), Positives = 97/97 (100%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK Sbjct: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 Query: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK Sbjct: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 >gi|14192939 SPANX family, member D [Homo sapiens] Length = 97 Score = 191 bits (486), Expect = 8e-50 Identities = 95/97 (97%), Positives = 96/97 (98%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRN K Sbjct: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNFK 60 Query: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 RTSPEELVNDHAR+NRINPLQMEEEEFMEIMVEIPAK Sbjct: 61 RTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK 97 >gi|14192937 sperm protein associated with the nucleus, X chromosome, family member A1 [Homo sapiens] Length = 97 Score = 184 bits (467), Expect = 1e-47 Identities = 91/97 (93%), Positives = 94/97 (96%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 MDKQSSAGGVKRSVPCDSNEANEMMPET +G SDPQPAPKK+KTSESSTILVVRYRRN K Sbjct: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK 60 Query: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 RTSPEEL+NDHARENRINPLQMEEEEFMEIMVEIPAK Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97 >gi|22027489 sperm protein associated with the nucleus, X chromosome, family member A2 [Homo sapiens] Length = 97 Score = 184 bits (467), Expect = 1e-47 Identities = 91/97 (93%), Positives = 94/97 (96%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 MDKQSSAGGVKRSVPCDSNEANEMMPET +G SDPQPAPKK+KTSESSTILVVRYRRN K Sbjct: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK 60 Query: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 RTSPEEL+NDHARENRINPLQMEEEEFMEIMVEIPAK Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97 >gi|13435137 sperm protein associated with the nucleus, X chromosome, family member C [Homo sapiens] Length = 97 Score = 181 bits (458), Expect = 1e-46 Identities = 89/97 (91%), Positives = 93/97 (95%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 MDKQSSAGGVKRSVPC+SNE NE MPET +G SDPQPAPKK+KTSESSTILVVRYRRNVK Sbjct: 1 MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60 Query: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 RTSPEEL+NDHARENRINPLQMEEEEFMEIMVEIPAK Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97 >gi|14196344 SPANX family, member B1 [Homo sapiens] Length = 103 Score = 150 bits (380), Expect = 2e-37 Identities = 79/103 (76%), Positives = 85/103 (82%), Gaps = 6/103 (5%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 54 M +QSS +KRSVPC+SNEANE MPET +G SDPQPAPKK+KTSESSTILVVR Sbjct: 1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60 Query: 55 YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 YRRNVKRTSPEELVNDHARENRINP QMEEEEF+EI E P K Sbjct: 61 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103 >gi|22027492 sperm protein associated with the nucleus, X chromosome, family member B2 [Homo sapiens] Length = 103 Score = 150 bits (380), Expect = 2e-37 Identities = 79/103 (76%), Positives = 85/103 (82%), Gaps = 6/103 (5%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 54 M +QSS +KRSVPC+SNEANE MPET +G SDPQPAPKK+KTSESSTILVVR Sbjct: 1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60 Query: 55 YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 YRRNVKRTSPEELVNDHARENRINP QMEEEEF+EI E P K Sbjct: 61 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103 >gi|190570192 SPANX family, member F1 [Homo sapiens] Length = 103 Score = 149 bits (377), Expect = 4e-37 Identities = 78/103 (75%), Positives = 85/103 (82%), Gaps = 6/103 (5%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 54 M +QSS +KRSVPC+SNEANE MPET +G SDPQPAPKK+KTSESSTILVVR Sbjct: 1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60 Query: 55 YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97 YRRNVKRTSPEEL+NDHARENRINP QMEEEEF+EI E P K Sbjct: 61 YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103 >gi|57634514 SPANX-N2 protein [Homo sapiens] Length = 180 Score = 62.0 bits (149), Expect = 1e-10 Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%) Query: 5 SSAGGVKRSVPCDSN-EANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTS 63 SS G KR PC+SN + N+ M E + P+ + +K KT E TI+V YR++ K S Sbjct: 6 SSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKHTKINS 65 Query: 64 PEELVNDHARENRINPLQMEEEEFME 89 +L D +REN INP+Q EE+E ++ Sbjct: 66 -NQLEKDQSRENSINPVQEEEDEGLD 90 >gi|58801563 SPANX-N3 protein [Homo sapiens] Length = 141 Score = 59.7 bits (143), Expect = 5e-10 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Query: 5 SSAGGVKRSVPCDSN-EANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTS 63 SS G K PC+SN + N+ M E + P+ + KK KTSE I+ V Y R K+ + Sbjct: 6 SSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKKTKTSEYP-IIFVYYLRKGKKIN 64 Query: 64 PEELVNDHARENRINPLQMEEEEFMEI 90 +L N+ ++EN INP+Q EE+E +++ Sbjct: 65 SNQLENEQSQENSINPIQKEEDEGVDL 91 >gi|57528121 SPANX-N1 protein [Homo sapiens] Length = 72 Score = 56.6 bits (135), Expect = 4e-09 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 5 SSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSP 64 SS G KR PC+SN N+ M ET + P+P+ KK+KTSE ST+L YR+ K+ Sbjct: 6 SSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRK-AKKIHS 64 Query: 65 EELVNDHA 72 +L ND + Sbjct: 65 NQLENDQS 72 >gi|57528144 SPANX family, member N5 [Homo sapiens] Length = 72 Score = 56.6 bits (135), Expect = 4e-09 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 5 SSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSP 64 SS G KR PCDSN N+ M ET + +P+ KK+KTSE ST+LV+ YR+ K+ Sbjct: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK-TKKIHS 64 Query: 65 EELVNDHA 72 +L ND + Sbjct: 65 NQLENDQS 72 >gi|224586880 Ras protein-specific guanine nucleotide-releasing factor 1 isoform 3 [Homo sapiens] Length = 1257 Score = 32.7 bits (73), Expect = 0.064 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 + KQSS ++ D N++++ ETS S PK +K SS + Y V Sbjct: 813 LSKQSSEVSMREESDIDQNQSDDGDTETSPTKS--PTTPKSVKNKNSSEFPLFSYNNGVV 870 Query: 61 RTSPEELVNDHA 72 TS EL N+ + Sbjct: 871 MTSCRELDNNRS 882 >gi|24797099 Ras protein-specific guanine nucleotide-releasing factor 1 isoform 1 [Homo sapiens] Length = 1273 Score = 32.7 bits (73), Expect = 0.064 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 + KQSS ++ D N++++ ETS S PK +K SS + Y V Sbjct: 829 LSKQSSEVSMREESDIDQNQSDDGDTETSPTKS--PTTPKSVKNKNSSEFPLFSYNNGVV 886 Query: 61 RTSPEELVNDHA 72 TS EL N+ + Sbjct: 887 MTSCRELDNNRS 898 >gi|24797101 Ras protein-specific guanine nucleotide-releasing factor 1 isoform 2 [Homo sapiens] Length = 489 Score = 32.7 bits (73), Expect = 0.064 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 1 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60 + KQSS ++ D N++++ ETS S PK +K SS + Y V Sbjct: 45 LSKQSSEVSMREESDIDQNQSDDGDTETSPTKS--PTTPKSVKNKNSSEFPLFSYNNGVV 102 Query: 61 RTSPEELVNDHA 72 TS EL N+ + Sbjct: 103 MTSCRELDNNRS 114 >gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] Length = 1260 Score = 28.9 bits (63), Expect = 0.92 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 23/87 (26%) Query: 11 KRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSPEELVND 70 K + CD+N ++ +P+ S S QP L T ++S +L + Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209 Query: 71 HARENRINPLQMEEEEFMEIMVEIPAK 97 +EN N +++ E + +V++P + Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234 >gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] Length = 1265 Score = 28.9 bits (63), Expect = 0.92 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 23/87 (26%) Query: 11 KRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSPEELVND 70 K + CD+N ++ +P+ S S QP L T ++S +L + Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209 Query: 71 HARENRINPLQMEEEEFMEIMVEIPAK 97 +EN N +++ E + +V++P + Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234 >gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] Length = 1261 Score = 28.9 bits (63), Expect = 0.92 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 23/87 (26%) Query: 11 KRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSPEELVND 70 K + CD+N ++ +P+ S S QP L T ++S +L + Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209 Query: 71 HARENRINPLQMEEEEFMEIMVEIPAK 97 +EN N +++ E + +V++P + Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234 >gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo sapiens] Length = 1512 Score = 28.5 bits (62), Expect = 1.2 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 26/107 (24%) Query: 13 SVPCDSNEANEMMPETSSGYSDPQPAPKK----------------LKTSESSTILVVRYR 56 S C SN +N ++P + ++ P +K L+ S S+ V ++ Sbjct: 1094 SFGCSSNSSNAVIPSDETVFT---PVEEKCRLDVNTELNSSIEDLLEASMPSSDTTVTFK 1150 Query: 57 RNVKRTSPEELVNDHARENRIN-------PLQMEEEEFMEIMVEIPA 96 V SPE+ ND ++ +N ++ EEEE + I + + A Sbjct: 1151 SEVAVLSPEKAENDDTYKDDVNHNQKCKEKMEAEEEEALAIAMAMSA 1197 >gi|4885075 atonal homolog 1 [Homo sapiens] Length = 354 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 4 QSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTS 63 Q ++GG +R P S P ++ GYS Q T E S + + ++N+ + Sbjct: 257 QQASGGSQRPTPPGSCRTRFSAPASAGGYS-VQLDALHFSTFEDSALTAMMAQKNLSPSL 315 Query: 64 PEELVNDHAREN 75 P ++ EN Sbjct: 316 PGSILQPVQEEN 327 >gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] Length = 223 Score = 27.3 bits (59), Expect = 2.7 Identities = 14/41 (34%), Positives = 23/41 (56%) Query: 33 SDPQPAPKKLKTSESSTILVVRYRRNVKRTSPEELVNDHAR 73 +DPQP P+ L+T+ + +R RR V T+ + L + R Sbjct: 157 TDPQPHPRWLRTAPGAAPTSLRRRRGVGVTARQALRREGMR 197 >gi|116256464 hypothetical protein LOC343990 [Homo sapiens] Length = 962 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/42 (28%), Positives = 22/42 (52%) Query: 5 SSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSE 46 S+ G +RSVP ++ ++P+ G P P P++ +E Sbjct: 426 SARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETE 467 >gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo sapiens] Length = 253 Score = 26.9 bits (58), Expect = 3.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Query: 71 HARENRINPLQMEEEEFMEIMVEIPAK 97 H+ N I+PL++EE +V++PAK Sbjct: 48 HSGLNSISPLELEESVGFAALVQLPAK 74 >gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo sapiens] Length = 279 Score = 26.9 bits (58), Expect = 3.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Query: 71 HARENRINPLQMEEEEFMEIMVEIPAK 97 H+ N I+PL++EE +V++PAK Sbjct: 48 HSGLNSISPLELEESVGFAALVQLPAK 74 >gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] Length = 2063 Score = 26.9 bits (58), Expect = 3.5 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 13/75 (17%) Query: 3 KQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQP------APKKLKTSESSTILV--VR 54 KQS++G KR+ P +S ++ SS + P P APK S+++ L+ V Sbjct: 1314 KQSNSGATKRASPSNSRRSS----PGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVE 1369 Query: 55 YRRNVKRTSPEELVN 69 RNV SP L N Sbjct: 1370 LPRNV-LVSPTPLAN 1383 >gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4 [Homo sapiens] Length = 2073 Score = 26.9 bits (58), Expect = 3.5 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 17 DSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRT----SPEELVNDHA 72 D E ETS G + P P + + E+ L+ + + T SP + Sbjct: 1284 DEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKP 1343 Query: 73 RENRINPLQMEEEE 86 ++ I P + EEEE Sbjct: 1344 EDDLIKPEEEEEEE 1357 >gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] Length = 1989 Score = 26.9 bits (58), Expect = 3.5 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Query: 11 KRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSPEELVND 70 KR + D N+MM SS S P+ +L E + + Y +K +E Sbjct: 930 KRKLEQDRFGPNKMMRLDSSPVSSPRKHSAELIAMEKRRLQKLEYEYALKIQKLKEARAL 989 Query: 71 HARENR-INPLQMEEEEF 87 A+E + I+P+ EE EF Sbjct: 990 KAKEQQNISPVVEEEPEF 1007 >gi|188497758 ubiquitin associated protein 2-like isoform a [Homo sapiens] Length = 1087 Score = 26.9 bits (58), Expect = 3.5 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 14 VPCDSNEANEMMPETSSGYSD-PQPAPKKLKTSESSTIL 51 +P S A +M P +S S PQPA +KLK + L Sbjct: 456 LPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASL 494 >gi|188497756 ubiquitin associated protein 2-like isoform b [Homo sapiens] Length = 983 Score = 26.9 bits (58), Expect = 3.5 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 14 VPCDSNEANEMMPETSSGYSD-PQPAPKKLKTSESSTIL 51 +P S A +M P +S S PQPA +KLK + L Sbjct: 456 LPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASL 494 >gi|48255931 hepatoma-derived growth factor-related protein 2 isoform 1 [Homo sapiens] Length = 671 Score = 26.9 bits (58), Expect = 3.5 Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 2 DKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESST 49 DK S G+KR P ++ + SS +P + + SESS+ Sbjct: 147 DKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSS 194 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.306 0.123 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,726,622 Number of Sequences: 37866 Number of extensions: 142806 Number of successful extensions: 553 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 521 Number of HSP's gapped (non-prelim): 50 length of query: 97 length of database: 18,247,518 effective HSP length: 68 effective length of query: 29 effective length of database: 15,672,630 effective search space: 454506270 effective search space used: 454506270 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.