TMEM106C 13893

Name: TMEM106C	Sequence: fasta or formatted (231aa)		NCBI GI: 219802857
Description: transmembrane protein 106C isoform b		Not currently referenced in the text
Other entries for this name: alt prot {250aa} transmembrane protein 106C isoform a alt mRNA {231aa} transmembrane protein 106C isoform b alt prot {250aa} transmembrane protein 106C isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 12 3 C cysteine 2.6 6 1 D aspartate 4.3 10 3 E glutamate 4.8 11 2 F phenylalanine 5.2 12 2 G glycine 5.6 13 2 H histidine 2.6 6 2 I isoleucine 6.9 16 1 K lysine 3.5 8 1 L leucine 9.5 22 2 M methionine 2.6 6 1 N asparagine 3.5 8 1 P proline 3.5 8 1 Q glutamine 5.6 13 1 R arginine 4.8 11 2 S serine 8.7 20 2 T threonine 7.8 18 1 V valine 9.5 22 2 W tryptophan 0.0 0 0 Y tyrosine 3.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 106C isoform b TMEM106C 1.000 transmembrane protein 106C isoform b TMEM106C 0.975 transmembrane protein 106C isoform a TMEM106C 0.975 transmembrane protein 106C isoform a TMEM106B 0.403 transmembrane protein 106B TMEM106B 0.403 transmembrane protein 106B TMEM106A 0.247 transmembrane protein 106A ND2 0.018 NADH dehydrogenase subunit 2 ND2 0.016 NADH dehydrogenase subunit 2 CACNB4 0.012 calcium channel, voltage-dependent, beta 4 subunit ... CACNB4 0.012 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.012 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.012 calcium channel, voltage-dependent, beta 4 subunit i... RPE65 0.012 retinal pigment epithelium-specific protein 65kDa [Ho... INTS1 0.012 integrator complex subunit 1 FAM179A 0.009 hypothetical protein LOC165186 CDH7 0.007 cadherin 7, type 2 preproprotein CDH7 0.007 cadherin 7, type 2 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.