TMEM106B 27377

Name: TMEM106B	Sequence: fasta or formatted (274aa)		NCBI GI: 40254893
Description: transmembrane protein 106B		Not currently referenced in the text
Other entries for this name: alt mRNA {274aa} transmembrane protein 106B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 8 1 C cysteine 1.8 5 1 D aspartate 4.4 12 1 E glutamate 4.7 13 2 F phenylalanine 3.3 9 2 G glycine 5.8 16 1 H histidine 1.8 5 1 I isoleucine 6.6 18 2 K lysine 3.6 10 1 L leucine 8.0 22 3 M methionine 2.9 8 2 N asparagine 6.6 18 3 P proline 3.6 10 1 Q glutamine 6.6 18 2 R arginine 5.1 14 2 S serine 7.7 21 2 T threonine 8.0 22 3 V valine 9.9 27 1 W tryptophan 0.0 0 0 Y tyrosine 6.6 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 106B TMEM106B 1.000 transmembrane protein 106B TMEM106C 0.363 transmembrane protein 106C isoform a TMEM106C 0.363 transmembrane protein 106C isoform a TMEM106C 0.333 transmembrane protein 106C isoform b TMEM106C 0.333 transmembrane protein 106C isoform b TMEM106A 0.325 transmembrane protein 106A PTPRC 0.019 protein tyrosine phosphatase, receptor type, C isofo... ZNF512 0.013 zinc finger protein 512 FN3KRP 0.011 fructosamine 3 kinase related protein EFEMP1 0.010 EGF-containing fibulin-like extracellular matrix pro... EFEMP1 0.010 EGF-containing fibulin-like extracellular matrix pro... EFEMP1 0.010 EGF-containing fibulin-like extracellular matrix prot... NAP5 0.008 Nck-associated protein 5 isoform 1 LIMK2 0.008 LIM domain kinase 2 isoform 1 LIMK2 0.008 LIM domain kinase 2 isoform 2b LIMK2 0.008 LIM domain kinase 2 isoform 2a LOC100287699 0.008 PREDICTED: hypothetical protein XP_002342252 PGR 0.006 progesterone receptor SPINT2 0.006 serine protease inhibitor, Kunitz type, 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.