RPE65 29342

Name: RPE65	Sequence: fasta or formatted (533aa)		NCBI GI: 4506591
Description: retinal pigment epithelium-specific protein 65kDa		Referenced in: Photoreceptors and Related Functions Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 28 1 C cysteine 2.4 13 2 D aspartate 4.5 24 2 E glutamate 7.1 38 2 F phenylalanine 6.6 35 2 G glycine 5.6 30 2 H histidine 2.8 15 2 I isoleucine 5.4 29 1 K lysine 6.6 35 2 L leucine 8.4 45 2 M methionine 0.8 4 1 N asparagine 6.2 33 2 P proline 6.4 34 2 Q glutamine 2.1 11 1 R arginine 3.6 19 2 S serine 5.3 28 2 T threonine 6.0 32 2 V valine 8.1 43 3 W tryptophan 1.7 9 1 Y tyrosine 5.3 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinal pigment epithelium-specific protein 65kDa [Ho... BCO2 0.369 beta-carotene dioxygenase 2 isoform a BCO2 0.369 beta-carotene dioxygenase 2 isoform b BCMO1 0.347 beta-carotene 15,15'-monooxygenase TMEM106C 0.006 transmembrane protein 106C isoform a TMEM106C 0.006 transmembrane protein 106C isoform a SVEP1 0.005 polydom TMEM106C 0.005 transmembrane protein 106C isoform b TMEM106C 0.005 transmembrane protein 106C isoform b ELAC2 0.005 elaC homolog 2 LOC401934 0.004 PREDICTED: hypothetical protein LOC401934 0.004 PREDICTED: hypothetical protein LOC401934 0.004 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.