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Search of human proteins with 219283152
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219283152 apoptosis inhibitor 5 isoform a [Homo sapiens]
(524 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219283152 apoptosis inhibitor 5 isoform a [Homo sapiens] 1033 0.0
gi|5729730 apoptosis inhibitor 5 isoform b [Homo sapiens] 978 0.0
gi|219283155 apoptosis inhibitor 5 isoform c [Homo sapiens] 827 0.0
gi|5729796 cytochrome P450, family 46 [Homo sapiens] 35 0.22
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 34 0.29
gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens] 33 0.49
gi|13375721 hypothetical protein LOC79607 [Homo sapiens] 33 0.49
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 33 0.64
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 33 0.64
gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapi... 33 0.83
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 33 0.83
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 33 0.83
gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3... 32 1.4
gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1... 32 1.4
gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4... 32 1.4
gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2 [... 32 1.4
gi|4885649 SUMO-1 activating enzyme subunit 2 [Homo sapiens] 32 1.4
gi|9910266 kinesin family member 15 [Homo sapiens] 31 3.2
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens] 31 3.2
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b... 30 4.1
gi|4504445 heterogeneous nuclear ribonucleoprotein A1 isoform a ... 30 4.1
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 30 5.4
gi|46488923 astrotactin isoform 1 [Homo sapiens] 30 5.4
gi|46488921 astrotactin isoform 2 [Homo sapiens] 30 5.4
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 30 5.4
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom... 30 5.4
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 30 5.4
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 30 5.4
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 30 5.4
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens] 30 5.4
>gi|219283152 apoptosis inhibitor 5 isoform a [Homo sapiens]
Length = 524
Score = 1033 bits (2672), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA 60
MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA
Sbjct: 1 MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA 60
Query: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 120
DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 120
Query: 121 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 180
LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK
Sbjct: 121 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 180
Query: 181 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 240
KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ
Sbjct: 181 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 240
Query: 241 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 300
CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM
Sbjct: 241 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 300
Query: 301 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 360
EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF
Sbjct: 301 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 360
Query: 361 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 420
LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN
Sbjct: 361 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 420
Query: 421 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 480
INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI
Sbjct: 421 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 480
Query: 481 YNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNRSRGRLY 524
YNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNRSRGRLY
Sbjct: 481 YNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNRSRGRLY 524
>gi|5729730 apoptosis inhibitor 5 isoform b [Homo sapiens]
Length = 504
Score = 978 bits (2529), Expect = 0.0
Identities = 498/499 (99%), Positives = 499/499 (100%)
Query: 1 MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA 60
MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA
Sbjct: 1 MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA 60
Query: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 120
DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 120
Query: 121 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 180
LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK
Sbjct: 121 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 180
Query: 181 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 240
KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ
Sbjct: 181 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 240
Query: 241 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 300
CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM
Sbjct: 241 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 300
Query: 301 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 360
EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF
Sbjct: 301 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 360
Query: 361 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 420
LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN
Sbjct: 361 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 420
Query: 421 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 480
INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI
Sbjct: 421 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 480
Query: 481 YNPPSGKYSSNLGNFNYEQ 499
YNPPSGKYSSNLGNFNYE+
Sbjct: 481 YNPPSGKYSSNLGNFNYER 499
>gi|219283155 apoptosis inhibitor 5 isoform c [Homo sapiens]
Length = 450
Score = 827 bits (2137), Expect = 0.0
Identities = 437/499 (87%), Positives = 441/499 (88%), Gaps = 54/499 (10%)
Query: 1 MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELA 60
MPTVEELYRNYGI LA
Sbjct: 1 MPTVEELYRNYGI---------------------------------------------LA 15
Query: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 120
D+ ++ IRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA
Sbjct: 16 DAT---------EQVGQIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNA 66
Query: 121 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 180
LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK
Sbjct: 67 LLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESK 126
Query: 181 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 240
KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ
Sbjct: 127 KVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQ 186
Query: 241 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 300
CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM
Sbjct: 187 CTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDM 246
Query: 301 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 360
EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF
Sbjct: 247 EKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDF 306
Query: 361 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 420
LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN
Sbjct: 307 LTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNN 366
Query: 421 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 480
INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI
Sbjct: 367 INVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQI 426
Query: 481 YNPPSGKYSSNLGNFNYEQ 499
YNPPSGKYSSNLGNFNYE+
Sbjct: 427 YNPPSGKYSSNLGNFNYER 445
>gi|5729796 cytochrome P450, family 46 [Homo sapiens]
Length = 500
Score = 34.7 bits (78), Expect = 0.22
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 21 VGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRR 80
+G K Q + ++G T + A+F+P K E+ +S L + V RR
Sbjct: 205 LGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESI--RFLRQVGRDWVQRRR 262
Query: 81 QAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI 140
+A+K GE +P ADILTQ+L+ ++ A+ D +G L +
Sbjct: 263 EALKR------GEEVP--ADILTQILKAEEGAQ--------------DDEGLLDNFVTFF 300
Query: 141 LQGEDIVRERAIKFLSTKLKTLPDEV--LTKEVEELILTESKKVLEDV 186
+ G + + F +L P+ V L EV+E+I ++ ED+
Sbjct: 301 IAGHE-TSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDL 347
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 34.3 bits (77), Expect = 0.29
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 19/92 (20%)
Query: 450 EIGQKRASEDTTSGSPPKKSSAGPKRD--------ARQIYNPPSGKYSSNLGNF--NYEQ 499
E+G +SE T +S++ +D ++ I P K GN N++
Sbjct: 1608 ELGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHGNGKRNWKT 1667
Query: 500 RGAF---------RGSRGGRGWGTRGNRSRGR 522
RG R SRGGRG G RG SRGR
Sbjct: 1668 RGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGR 1699
>gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]
Length = 1512
Score = 33.5 bits (75), Expect = 0.49
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 392 RLALQGKTGEALKTEENKIKVVALKITNNINVLIKDLFHIPPSYKSTVTLSWKPV----- 446
++A QG+ LKTE+ + +++ +++L + YKS + + +KPV
Sbjct: 907 KVASQGEVVRKLKTEKAP--------KDQVDIAVQELLQLKAQYKSLIGVEYKPVSATGA 958
Query: 447 QKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQIYNPPSGKYSSNLG 493
+ + +K + + P+K + G ++D + N G SS G
Sbjct: 959 EDKDKKKKEKENKSEKQNKPQKQNDGQRKDPSK--NQGGGLSSSGAG 1003
>gi|13375721 hypothetical protein LOC79607 [Homo sapiens]
Length = 351
Score = 33.5 bits (75), Expect = 0.49
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 59 LADSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVA-DILTQLLQTDDSAEFNLV 117
L D+AI+ DL EDE+ ++ + E +NL VA D++ +L +
Sbjct: 72 LLDAAID--FDLLEDEESKKFQKCLHE------DKNLVHVAHDLIQKLSPRTSNVRSTFF 123
Query: 118 NNALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLT---KEVEEL 174
+ L +F D + + Q+LQ + E L+T L + K++E L
Sbjct: 124 KDCLYEVFD-DLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAADQGKQLESL 182
Query: 175 ILTESKKVLE 184
LT+ KKVLE
Sbjct: 183 DLTDEKKVLE 192
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 498 EQRGAFRGSRGGRGWGTRGNRSRGRL 523
E RGA RGS RGWG R R R RL
Sbjct: 136 EGRGALRGSGKRRGWGLRPQRVRSRL 161
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 498 EQRGAFRGSRGGRGWGTRGNRSRGRL 523
E RGA RGS RGWG R R R RL
Sbjct: 136 EGRGALRGSGKRRGWGLRPQRVRSRL 161
>gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo
sapiens]
Length = 544
Score = 32.7 bits (73), Expect = 0.83
Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 14/139 (10%)
Query: 21 VGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRR 80
V +H D Y I KGG R+ + K+ K + A D D + R
Sbjct: 360 VRKHLDEYASIASSSKGG----RIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFRE 415
Query: 81 QAIKELPQFATGENLPRVADILTQLLQTDDSA-----EFNLVNNALLSIFKMDAKGTLGG 135
I L N + + +L D+ EF+ + A L + +D + G
Sbjct: 416 YVIG-LAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLD----VSG 470
Query: 136 LFSQILQGEDIVRERAIKF 154
LF +I QG+ I E F
Sbjct: 471 LFKEIAQGDSISYEEFKSF 489
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 32.7 bits (73), Expect = 0.83
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 498 EQRGAFRGSRGGRGWGTRGNRSRGRL 523
E RGA RGS RGWG R R R RL
Sbjct: 136 EGRGAVRGSGKRRGWGLRPQRVRSRL 161
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 32.7 bits (73), Expect = 0.83
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 148 RERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVLFMKILSGLKSL--Q 205
+E+ I T+L L DE+ E + L TE K L EE + KI K L +
Sbjct: 442 KEKKISAAQTRLSELHDEIEKAEQQILRATEEFKQL-----EEAIQLKKISEAGKDLLYK 496
Query: 206 TVSGRQQLVELVAEQA-DLE 224
+SGR QLV + ++A DLE
Sbjct: 497 QLSGRLQLVNKLRQEALDLE 516
>gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3
[Homo sapiens]
Length = 535
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 472 GPKRDARQIYNPPSGKYSSN-LGNFNYEQRGAF----RGSRGGRGWGTRGNRSRG 521
G R R PP G+ + G Y QRGA RGSRGGRG + R RG
Sbjct: 405 GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRG 459
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 463 GSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNR 518
G+PP + AG + + PP G G ++ RGSRG RG G R
Sbjct: 421 GAPPPRGRAGYSQRGAPL-GPPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKR 475
>gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1
[Homo sapiens]
Length = 636
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 472 GPKRDARQIYNPPSGKYSSN-LGNFNYEQRGAF----RGSRGGRGWGTRGNRSRG 521
G R R PP G+ + G Y QRGA RGSRGGRG + R RG
Sbjct: 506 GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRG 560
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 463 GSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNR 518
G+PP + AG + + PP G G ++ RGSRG RG G R
Sbjct: 522 GAPPPRGRAGYSQRGAPL-GPPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKR 576
>gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4
[Homo sapiens]
Length = 532
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 472 GPKRDARQIYNPPSGKYSSN-LGNFNYEQRGAF----RGSRGGRGWGTRGNRSRG 521
G R R PP G+ + G Y QRGA RGSRGGRG + R RG
Sbjct: 402 GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRG 456
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 463 GSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNR 518
G+PP + AG + + PP G G ++ RGSRG RG G R
Sbjct: 418 GAPPPRGRAGYSQRGAPL-GPPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKR 472
>gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2
[Homo sapiens]
Length = 633
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 472 GPKRDARQIYNPPSGKYSSN-LGNFNYEQRGAF----RGSRGGRGWGTRGNRSRG 521
G R R PP G+ + G Y QRGA RGSRGGRG + R RG
Sbjct: 503 GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRG 557
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 463 GSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNR 518
G+PP + AG + + PP G G ++ RGSRG RG G R
Sbjct: 519 GAPPPRGRAGYSQRGAPL-GPPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKR 573
>gi|4885649 SUMO-1 activating enzyme subunit 2 [Homo sapiens]
Length = 640
Score = 32.0 bits (71), Expect = 1.4
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 217 VAEQAD-LEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTT 275
+AE+ D E ++ DP +D + + +FS N+ S + ++P + T
Sbjct: 333 LAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNA 392
Query: 276 PVEGLDIQLEVLKLLAEMSSFC 297
+ GL I LE LK+L+ C
Sbjct: 393 VIAGL-IVLEGLKILSGKIDQC 413
>gi|9910266 kinesin family member 15 [Homo sapiens]
Length = 1388
Score = 30.8 bits (68), Expect = 3.2
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 210 RQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPN 269
R++ +EL +E L++ N + + ++ C RQ V +K +H+
Sbjct: 610 RKRQLELESELQSLQKA-NLNLENLLEATKACKRQEVSQLNK-IHAE------------T 655
Query: 270 LGTLTTPVEGLDIQLE-VLKLLAEMSSFCGDMEKLETNLRKLFDKLLEYMPLPPEEAENG 328
L +TTP + + V KL EM SF L T + D + P+PPE E
Sbjct: 656 LKIITTPTKAYQLHSRPVPKLSPEMGSF----GSLYTQNSSILDNDILNEPVPPEMNEQA 711
Query: 329 ENAGNEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQVYI 388
A +EE + + L AKL+ E+ K+ K LQ L+ +
Sbjct: 712 FEAISEELRTVQEQMSA---------------LQAKLDEEEHKNLK--LQQHVDKLEHHS 754
Query: 389 RQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIKDL 428
Q++ + + K +E ++ + +NVL K L
Sbjct: 755 TQMQELFSSERIDWTKQQE--------ELLSQLNVLEKQL 786
>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
Length = 5795
Score = 30.8 bits (68), Expect = 3.2
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 440 TLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQ 479
+L W P + + G+++A+EDT G + ++ +R+ R+
Sbjct: 589 SLGWSPSKHTKTGREKATEDTEQGREGEATATADRREQRR 628
>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
[Homo sapiens]
Length = 372
Score = 30.4 bits (67), Expect = 4.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 496 NYEQRGAFRGSRGGRGWGTRGNRSRG 521
N+ RG F GSRGG G+G G+ G
Sbjct: 221 NFSGRGGFGGSRGGGGYGGSGDGYNG 246
>gi|4504445 heterogeneous nuclear ribonucleoprotein A1 isoform a
[Homo sapiens]
Length = 320
Score = 30.4 bits (67), Expect = 4.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 496 NYEQRGAFRGSRGGRGWGTRGNRSRG 521
N+ RG F GSRGG G+G G+ G
Sbjct: 221 NFSGRGGFGGSRGGGGYGGSGDGYNG 246
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 30.0 bits (66), Expect = 5.4
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 75 DVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLG 134
DV ++++ ELP +T E+L +V + + LL D + L L ++ + L
Sbjct: 485 DVEELKRSVGELP--STVESLQKVQEQVHTLLSQDQAQAARLPPQDFLD--RLSSLDNLK 540
Query: 135 GLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVLF 194
SQ+ E +K L T + +L + E E L +K +L+D+ + LF
Sbjct: 541 ASVSQV--------EADLKMLRTAVDSLVAYSVKIETNENNLESAKGLLDDLRNDLDRLF 592
Query: 195 MKI 197
+K+
Sbjct: 593 VKV 595
>gi|46488923 astrotactin isoform 1 [Homo sapiens]
Length = 1294
Score = 30.0 bits (66), Expect = 5.4
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 358 PDFLTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEE---NKIKVVA 414
PDFLT +N ++ + + + R + +I+ ++A+ AL + + ++ VA
Sbjct: 788 PDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQVAISQALSNALHSLDGATSRADFVA 847
Query: 415 LKITNNINVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPK 474
L + N I++ + ++ + ++ W P ++V+ ED + G+ P S +
Sbjct: 848 L-LDQFGNHYIQEAIY---GFEESCSI-WYPNKQVQRRLWLEYEDISKGNSPSDESEERE 902
Query: 475 RDARQIYNP 483
RD + + P
Sbjct: 903 RDPKVLTFP 911
>gi|46488921 astrotactin isoform 2 [Homo sapiens]
Length = 1216
Score = 30.0 bits (66), Expect = 5.4
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 358 PDFLTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEE---NKIKVVA 414
PDFLT +N ++ + + + R + +I+ ++A+ AL + + ++ VA
Sbjct: 788 PDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQVAISQALSNALHSLDGATSRADFVA 847
Query: 415 LKITNNINVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPK 474
L + N I++ + ++ + ++ W P ++V+ ED + G+ P S +
Sbjct: 848 L-LDQFGNHYIQEAIY---GFEESCSI-WYPNKQVQRRLWLEYEDISKGNSPSDESEERE 902
Query: 475 RDARQIYNP 483
RD + + P
Sbjct: 903 RDPKVLTFP 911
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 30.0 bits (66), Expect = 5.4
Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 211 QQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNL 270
++L + + LE FN S +C L+C N+ R T Q L +L
Sbjct: 418 EKLSKRIMALEKLEDAFNKSKQECYS--LKC----------NLEKERMTTKQLSQELESL 465
Query: 271 GTLTTPVEGLDIQLE---------VLKLLAEMSSFCGDMEKLETNLRKLFDKLL---EYM 318
+E ++ +LE + KL F + + + L+K DKL +
Sbjct: 466 KVRIKELEAIESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQL 525
Query: 319 PLPPEEAENGENAGNEEPKLQFSY---VECLLYSFHQLGRKLPDFLTAKLNAEKLKD--- 372
+ + EE K VE +YS K D L KL AE+ K
Sbjct: 526 QVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV----TKERDDLKNKLKAEEEKGNDL 581
Query: 373 ------FKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
K RLQ + +++ GK+ AL E NKIK ++ ++ + + +K
Sbjct: 582 LSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEV-ERLKLKLK 640
Query: 427 DL 428
D+
Sbjct: 641 DM 642
>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
sapiens]
Length = 893
Score = 30.0 bits (66), Expect = 5.4
Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 211 QQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNL 270
++L + + LE FN S +C L+C N+ R T Q L +L
Sbjct: 178 EKLSKRIMALEKLEDAFNKSKQECYS--LKC----------NLEKERMTTKQLSQELESL 225
Query: 271 GTLTTPVEGLDIQLE---------VLKLLAEMSSFCGDMEKLETNLRKLFDKLL---EYM 318
+E ++ +LE + KL F + + + L+K DKL +
Sbjct: 226 KVRIKELEAIESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQL 285
Query: 319 PLPPEEAENGENAGNEEPKLQFSY---VECLLYSFHQLGRKLPDFLTAKLNAEKLKD--- 372
+ + EE K VE +YS K D L KL AE+ K
Sbjct: 286 QVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV----TKERDDLKNKLKAEEEKGNDL 341
Query: 373 ------FKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
K RLQ + +++ GK+ AL E NKIK ++ ++ + + +K
Sbjct: 342 LSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEV-ERLKLKLK 400
Query: 427 DL 428
D+
Sbjct: 401 DM 402
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 30.0 bits (66), Expect = 5.4
Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 211 QQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNL 270
++L + + LE FN S +C L+C N+ R T Q L +L
Sbjct: 418 EKLSKRIMALEKLEDAFNKSKQECYS--LKC----------NLEKERMTTKQLSQELESL 465
Query: 271 GTLTTPVEGLDIQLE---------VLKLLAEMSSFCGDMEKLETNLRKLFDKLL---EYM 318
+E ++ +LE + KL F + + + L+K DKL +
Sbjct: 466 KVRIKELEAIESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQL 525
Query: 319 PLPPEEAENGENAGNEEPKLQFSY---VECLLYSFHQLGRKLPDFLTAKLNAEKLKD--- 372
+ + EE K VE +YS K D L KL AE+ K
Sbjct: 526 QVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV----TKERDDLKNKLKAEEEKGNDL 581
Query: 373 ------FKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
K RLQ + +++ GK+ AL E NKIK ++ ++ + + +K
Sbjct: 582 LSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEV-ERLKLKLK 640
Query: 427 DL 428
D+
Sbjct: 641 DM 642
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 30.0 bits (66), Expect = 5.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 501 GAFRGSRGGRGWGTRGNRSRG 521
G FRG RGG G G RG R G
Sbjct: 191 GGFRGGRGGGGGGFRGGRGGG 211
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 30.0 bits (66), Expect = 5.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 501 GAFRGSRGGRGWGTRGNRSRG 521
G FRG RGG G G RG R G
Sbjct: 191 GGFRGGRGGGGGGFRGGRGGG 211
>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
Length = 391
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/74 (33%), Positives = 26/74 (35%), Gaps = 27/74 (36%)
Query: 448 KVEIGQKRASEDTTSGSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSR 507
KVE K + E G PP S GP R RG R
Sbjct: 80 KVEQATKPSFESGRRGPPPPPRSRGPPR--------------------------GLRGGR 113
Query: 508 GGRGWGTRGNRSRG 521
GG G GTRG SRG
Sbjct: 114 GGSG-GTRGPPSRG 126
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,864,402
Number of Sequences: 37866
Number of extensions: 830984
Number of successful extensions: 3197
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3144
Number of HSP's gapped (non-prelim): 94
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.