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Search of human proteins with 219282705
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219282705 hypothetical FLJ23584 [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219282705 hypothetical FLJ23584 [Homo sapiens] 519 e-148
gi|239753036 PREDICTED: hypothetical protein [Homo sapiens] 34 0.13
gi|239747603 PREDICTED: hypothetical protein [Homo sapiens] 34 0.13
gi|239741468 PREDICTED: hypothetical protein isoform 1 [Homo sap... 34 0.13
gi|239742380 PREDICTED: hypothetical protein [Homo sapiens] 32 0.50
gi|134031945 SCO-spondin [Homo sapiens] 32 0.50
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 30 1.5
gi|239754548 PREDICTED: similar to hCG1779533 [Homo sapiens] 30 1.9
gi|239743158 PREDICTED: similar to hCG1779533 [Homo sapiens] 30 1.9
gi|239508818 PREDICTED: similar to hCG1779533 [Homo sapiens] 30 1.9
gi|27901803 protein serine kinase H1 [Homo sapiens] 30 2.5
gi|222418587 hypothetical protein LOC57495 [Homo sapiens] 29 3.2
gi|13186236 fibroblast growth factor receptor 1 isoform 4 precur... 29 4.2
gi|13186234 fibroblast growth factor receptor 1 isoform 3 precur... 29 4.2
gi|13186251 fibroblast growth factor receptor 1 isoform 2 precur... 29 4.2
gi|105990522 fibroblast growth factor receptor 1 isoform 1 precu... 29 4.2
gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] 28 5.5
gi|222144244 fibroblast growth factor receptor 2 isoform 9 precu... 28 7.2
gi|222144231 fibroblast growth factor receptor 2 isoform 3 precu... 28 7.2
gi|222144241 fibroblast growth factor receptor 2 isoform 8 precu... 28 7.2
gi|222144239 fibroblast growth factor receptor 2 isoform 7 precu... 28 7.2
gi|222144237 fibroblast growth factor receptor 2 isoform 6 precu... 28 7.2
gi|222144235 fibroblast growth factor receptor 2 isoform 5 precu... 28 7.2
gi|222144233 fibroblast growth factor receptor 2 isoform 4 precu... 28 7.2
gi|221316639 fibroblast growth factor receptor 2 isoform 1 precu... 28 7.2
gi|221316638 fibroblast growth factor receptor 2 isoform 2 precu... 28 7.2
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 28 7.2
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 28 7.2
gi|31543980 zinc finger protein 263 [Homo sapiens] 28 7.2
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens] 28 9.4
>gi|219282705 hypothetical FLJ23584 [Homo sapiens]
Length = 243
Score = 519 bits (1337), Expect = e-148
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MLLSLLGACAVVGPFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQV 60
MLLSLLGACAVVGPFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQV
Sbjct: 1 MLLSLLGACAVVGPFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQV 60
Query: 61 TRTRFSTRNVIKVPLQKRAVPSMRCETVFKLTPEFFSPGKSRGLDSQQCAQRQRWGYRRS 120
TRTRFSTRNVIKVPLQKRAVPSMRCETVFKLTPEFFSPGKSRGLDSQQCAQRQRWGYRRS
Sbjct: 61 TRTRFSTRNVIKVPLQKRAVPSMRCETVFKLTPEFFSPGKSRGLDSQQCAQRQRWGYRRS 120
Query: 121 LQESWAQNLLSPQHPCPGPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPWCLHDG 180
LQESWAQNLLSPQHPCPGPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPWCLHDG
Sbjct: 121 LQESWAQNLLSPQHPCPGPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPWCLHDG 180
Query: 181 QTRPALDMCQEMEQLLLHSQERLVSLEPVISVRSRPTSMTLTTSLPNLLSAERLQFCPQR 240
QTRPALDMCQEMEQLLLHSQERLVSLEPVISVRSRPTSMTLTTSLPNLLSAERLQFCPQR
Sbjct: 181 QTRPALDMCQEMEQLLLHSQERLVSLEPVISVRSRPTSMTLTTSLPNLLSAERLQFCPQR 240
Query: 241 APA 243
APA
Sbjct: 241 APA 243
>gi|239753036 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 33.9 bits (76), Expect = 0.13
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEP----IFCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P +F + S+ LLP NS + W
Sbjct: 209 AQNLLKLTSPGPAPASCQHLQAQPLPHGVFSRPTSSSWLGLQAQLLPHNSLF--WPSSCP 266
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H GQ RP Q ++ LL
Sbjct: 267 AHGGQCRPKTSSSQTLQAHLL 287
>gi|239747603 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 33.9 bits (76), Expect = 0.13
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEP----IFCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P +F + S+ LLP NS + W
Sbjct: 209 AQNLLKLTSPGPAPASCQHLQAQPLPHGVFSRPTSSSWLGLQAQLLPHNSLF--WPSSCP 266
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H GQ RP Q ++ LL
Sbjct: 267 AHGGQCRPKTSSSQTLQAHLL 287
>gi|239741468 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 352
Score = 33.9 bits (76), Expect = 0.13
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEP----IFCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P +F + S+ LLP NS + W
Sbjct: 209 AQNLLKLTSPGPAPASCQHLQAQPLPHGVFSRPTSSSWLGLQAQLLPHNSLF--WPSSCP 266
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H GQ RP Q ++ LL
Sbjct: 267 AHGGQCRPKTSSSQTLQAHLL 287
>gi|239742380 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 32.0 bits (71), Expect = 0.50
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEPI----FCTTSIS-----NTCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P+ F S S LLP NS + W
Sbjct: 3 AQNLLKLTSPGPAPASCQHLQAQPLPHGGFSGPSSSYWLSLQAQLLPHNSLF--WPSSCP 60
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
+H GQ RP ++ LL
Sbjct: 61 VHGGQCRPKTSSGHTLQAHLL 81
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 32.0 bits (71), Expect = 0.50
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 92 TPEFFSPGKSRGLDSQQCAQRQRWGYRRSLQES--WAQNLLSPQHPC------PGPPSGV 143
T F S K+ L S Q Q W R L E+ W SP P PGP SGV
Sbjct: 2275 TGRFHSTAKTLALSSAQPGQLLHWP-REGLAETEHWPPGQESPTSPTETRPVSPGPASGV 2333
Query: 144 HTHSEPIFCTTS 155
H E + T+
Sbjct: 2334 PHHGESVQMVTT 2345
>gi|94681096 hypothetical protein LOC138724 isoform A [Homo
sapiens]
Length = 1079
Score = 30.4 bits (67), Expect = 1.5
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 1 MLLSLLGACAVVGPFHGPEWEPVQGLLSQNH---SCRDPQCCGNLLVLCLFLVWQVRHCW 57
+L LLGA +G W + L+ H SC Q GNL+ L LF+VWQ++ W
Sbjct: 4 LLEDLLGAKGDMGLL----WGQLTHALACRHCGSSCF--QSPGNLVTLFLFVVWQIQR-W 56
Query: 58 HQVTRTR 64
Q+ R R
Sbjct: 57 WQLGRLR 63
>gi|239754548 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 161
Score = 30.0 bits (66), Expect = 1.9
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEPI----FCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S ++P+ F S S+ LLP NS + W
Sbjct: 3 AQNLLKLTSPGPAPASCQRLQAQPLPHGGFSRPSSSSGLSLQAQLLPHNSLF--WPSSCP 60
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H Q RP Q ++ LL
Sbjct: 61 AHSDQCRPKTSSSQTLQACLL 81
>gi|239743158 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 162
Score = 30.0 bits (66), Expect = 1.9
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEPI----FCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P+ F S S+ LL NS + W
Sbjct: 3 AQNLLKLTSPGPAPASCQHLQAQPLPHGGFSRPSSSSGLSLQAQLLLHNSLF--WPSSCP 60
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H GQ RP Q + LL
Sbjct: 61 AHSGQCRPKTSSSQTPQARLL 81
>gi|239508818 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 162
Score = 30.0 bits (66), Expect = 1.9
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 126 AQNLLSPQHPCPGPPSGVHTHSEPI----FCTTSISN-----TCLLPQNSSWKAWQVPWC 176
AQNLL P P P S H ++P+ F S S+ LL NS + W
Sbjct: 3 AQNLLKLTSPGPAPASCQHLQAQPLPHGGFSRPSSSSGLSLQAQLLLHNSLF--WPSSCP 60
Query: 177 LHDGQTRPALDMCQEMEQLLL 197
H GQ RP Q + LL
Sbjct: 61 AHSGQCRPKTSSSQTPQARLL 81
>gi|27901803 protein serine kinase H1 [Homo sapiens]
Length = 424
Score = 29.6 bits (65), Expect = 2.5
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Query: 134 HPCPGPPSGVHTH--SEP 149
HPCPGPP+ HT SEP
Sbjct: 60 HPCPGPPTAGHTEPPSEP 77
>gi|222418587 hypothetical protein LOC57495 [Homo sapiens]
Length = 1742
Score = 29.3 bits (64), Expect = 3.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 LLGACAVVGPFHGPEWEPVQGL-LSQNHSCRDPQCCGNLLVLCLFLVWQVR--HCWHQVT 61
LL + G HG + G LS NH+ + ++ V+ L W + HCW++VT
Sbjct: 1043 LLSEVEIKGTKHGSSATYINGFTLSANHALAWLEASKDVTVIDLLYGWPLYQFHCWYEVT 1102
>gi|13186236 fibroblast growth factor receptor 1 isoform 4 precursor
[Homo sapiens]
Length = 731
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 609 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------MMRDCWHAVPSQRPTFKQLVE 661
>gi|13186234 fibroblast growth factor receptor 1 isoform 3 precursor
[Homo sapiens]
Length = 733
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 611 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------MMRDCWHAVPSQRPTFKQLVE 663
>gi|13186251 fibroblast growth factor receptor 1 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 698 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------MMRDCWHAVPSQRPTFKQLVE 750
>gi|105990522 fibroblast growth factor receptor 1 isoform 1
precursor [Homo sapiens]
Length = 822
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 700 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------MMRDCWHAVPSQRPTFKQLVE 752
>gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 28.5 bits (62), Expect = 5.5
Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 24/101 (23%)
Query: 93 PEFFSPGKSRGLDS-QQCAQRQRWGYRRSL--------QESWAQNLLSPQHP-------- 135
P + SPG+ GL++ CAQ W L SWA PQHP
Sbjct: 118 PSWESPGQG-GLEACPTCAQGSLWLPSAGLCSLPACFPSSSWAL----PQHPPEPLPFLA 172
Query: 136 --CPGPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVP 174
PG P T P L P +W+ W+ P
Sbjct: 173 PAWPGIPEDAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDP 213
>gi|222144244 fibroblast growth factor receptor 2 isoform 9
precursor [Homo sapiens]
Length = 680
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 615 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 667
>gi|222144231 fibroblast growth factor receptor 2 isoform 3
precursor [Homo sapiens]
Length = 769
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 704 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 756
>gi|222144241 fibroblast growth factor receptor 2 isoform 8
precursor [Homo sapiens]
Length = 704
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 586 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 638
>gi|222144239 fibroblast growth factor receptor 2 isoform 7
precursor [Homo sapiens]
Length = 705
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 587 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 639
>gi|222144237 fibroblast growth factor receptor 2 isoform 6
precursor [Homo sapiens]
Length = 706
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 588 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 640
>gi|222144235 fibroblast growth factor receptor 2 isoform 5
precursor [Homo sapiens]
Length = 707
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 614 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 666
>gi|222144233 fibroblast growth factor receptor 2 isoform 4
precursor [Homo sapiens]
Length = 709
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 591 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 643
>gi|221316639 fibroblast growth factor receptor 2 isoform 1
precursor [Homo sapiens]
Length = 821
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 703 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 755
>gi|221316638 fibroblast growth factor receptor 2 isoform 2
precursor [Homo sapiens]
Length = 822
Score = 28.1 bits (61), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 14 PFHGPEWEPVQGLLSQNHSCRDPQCCGNLLVLCLFLVWQVRHCWHQVTRTRFSTRNVIK 72
P+ G E + LL + H P C N L + +R CWH V R + + +++
Sbjct: 704 PYPGIPVEELFKLLKEGHRMDKPANCTNELYM------MMRDCWHAVPSQRPTFKQLVE 756
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 120 SLQESWAQNLLSPQHPCP--GPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPW 175
SLQ+ Q ++PQH GP VH S C +S P +++W PW
Sbjct: 253 SLQQETHQGRVAPQHGQVERGPACVVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPW 310
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 120 SLQESWAQNLLSPQHPCP--GPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPW 175
SLQ+ Q ++PQH GP VH S C +S P +++W PW
Sbjct: 253 SLQQETHQGRVAPQHGQVERGPACVVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPW 310
>gi|31543980 zinc finger protein 263 [Homo sapiens]
Length = 683
Score = 28.1 bits (61), Expect = 7.2
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 130 LSPQHPCPGPPSGVHTHSEPIFCTTSISNTCLLPQNSSWKAWQVPW 175
LSP+ P PG + P C+ +I LLP + +VPW
Sbjct: 288 LSPRGPAPGEEKFENLEGVPSVCSENIHPQVLLPDQA---RGEVPW 330
>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
Length = 1227
Score = 27.7 bits (60), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 112 RQRWGYRRSLQ--ESWAQNLLSPQHPCPGPPSG 142
RQRWG+RR+ Q + ++ S P P P G
Sbjct: 72 RQRWGFRRAAQAPDGASEPRASASRPQPAPADG 104
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.134 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,359,963
Number of Sequences: 37866
Number of extensions: 551899
Number of successful extensions: 1530
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 46
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.