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Search of human proteins with 218931253
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218931253 diacylglycerol lipase, beta isoform 2 [Homo
sapiens]
(543 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218931253 diacylglycerol lipase, beta isoform 2 [Homo sapiens] 1098 0.0
gi|218931251 diacylglycerol lipase, beta isoform 1 [Homo sapiens] 734 0.0
gi|27262632 neural stem cell-derived dendrite regulator [Homo sa... 213 3e-55
gi|109659839 solute carrier family 5 (sodium/glucose cotransport... 37 0.035
gi|109659836 solute carrier family 5 (sodium/glucose cotransport... 37 0.035
gi|13376339 plasticity-related protein 2 [Homo sapiens] 35 0.13
gi|150378528 G protein-coupled receptor associated sorting prote... 34 0.39
gi|150378489 G protein-coupled receptor associated sorting prote... 34 0.39
gi|103472136 G protein-coupled receptor associated sorting prote... 34 0.39
gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens] 33 0.87
gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens] 33 0.87
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 30 4.3
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 30 4.3
gi|167555125 low density lipoprotein receptor-related protein 3 ... 30 5.6
gi|29648315 small G protein signaling modulator 3 [Homo sapiens] 30 5.6
gi|28329436 aprataxin isoform a [Homo sapiens] 30 7.4
gi|28329430 aprataxin isoform b [Homo sapiens] 30 7.4
gi|171460958 nucleolar protein 10 [Homo sapiens] 30 7.4
>gi|218931253 diacylglycerol lipase, beta isoform 2 [Homo sapiens]
Length = 543
Score = 1098 bits (2841), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI 60
MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI
Sbjct: 1 MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI 60
Query: 61 VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA 120
VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA
Sbjct: 61 VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA 120
Query: 121 DGVQCDRTVVNGIIATVVVRTQIWCPATLRRASPCFISNRTISGTTKSLPRWSAMPQGAP 180
DGVQCDRTVVNGIIATVVVRTQIWCPATLRRASPCFISNRTISGTTKSLPRWSAMPQGAP
Sbjct: 121 DGVQCDRTVVNGIIATVVVRTQIWCPATLRRASPCFISNRTISGTTKSLPRWSAMPQGAP 180
Query: 181 SCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRKESV 240
SCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRKESV
Sbjct: 181 SCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRKESV 240
Query: 241 VVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILSQAF 300
VVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILSQAF
Sbjct: 241 VVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILSQAF 300
Query: 301 SIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSFIVS 360
SIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSFIVS
Sbjct: 301 SIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSFIVS 360
Query: 361 LVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDG 420
LVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDG
Sbjct: 361 LVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDG 420
Query: 421 GDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASGRFG 480
GDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASGRFG
Sbjct: 421 GDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASGRFG 480
Query: 481 CCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGVSSV 540
CCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGVSSV
Sbjct: 481 CCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGVSSV 540
Query: 541 DVA 543
DVA
Sbjct: 541 DVA 543
>gi|218931251 diacylglycerol lipase, beta isoform 1 [Homo sapiens]
Length = 672
Score = 734 bits (1895), Expect = 0.0
Identities = 363/366 (99%), Positives = 363/366 (99%)
Query: 178 GAPSCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRK 237
G CRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRK
Sbjct: 307 GGDCCRSRTTDYDLVGGDQLNCHFGSILHTTGLQYRDFIHVSFHDKVYELPFLVALDHRK 366
Query: 238 ESVVVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILS 297
ESVVVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILS
Sbjct: 367 ESVVVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDGILS 426
Query: 298 QAFSIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSF 357
QAFSIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSF
Sbjct: 427 QAFSIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYSQSF 486
Query: 358 IVSLVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTE 417
IVSLVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTE
Sbjct: 487 IVSLVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTE 546
Query: 418 LDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASG 477
LDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASG
Sbjct: 547 LDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPGRIIHLQEEGASG 606
Query: 478 RFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGV 537
RFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGV
Sbjct: 607 RFGCCSAAHYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAACVSCPAQGV 666
Query: 538 SSVDVA 543
SSVDVA
Sbjct: 667 SSVDVA 672
Score = 282 bits (721), Expect = 6e-76
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI 60
MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI
Sbjct: 1 MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWIGILTLYLMHRGKLDCAGGALLSSYLI 60
Query: 61 VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA 120
VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA
Sbjct: 61 VLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAWVA 120
Query: 121 DGVQCDRTVVNGIIATVVV 139
DGVQCDRTVVNGIIATVVV
Sbjct: 121 DGVQCDRTVVNGIIATVVV 139
>gi|27262632 neural stem cell-derived dendrite regulator [Homo
sapiens]
Length = 1042
Score = 213 bits (543), Expect = 3e-55
Identities = 126/340 (37%), Positives = 191/340 (56%), Gaps = 31/340 (9%)
Query: 214 DFIHVSFHDKVYELPFLVALDHRKESVVVAVRGTMSLQDVLTDLSAESEVLDVECEVQDR 273
D ++ S HD VYE PF VA+DH K+ VV+++RGT+S +D LTDL+ ++E L VE
Sbjct: 367 DIVYTSCHDAVYETPFYVAVDHDKKKVVISIRGTLSPKDALTDLTGDAERLPVEGHHGTW 426
Query: 274 LAHKGISQAARYVYQRLINDGILSQAFSI-----APEYRLVIVGHSLGGGAAALLATMLR 328
L HKG+ +A Y+ ++L + +LSQAF Y L++VGHSLG G AA+L+ +LR
Sbjct: 427 LGHKGMVLSAEYIKKKLEQEMVLSQAFGRDLGRGTKHYGLIVVGHSLGAGTAAILSFLLR 486
Query: 329 AAYPQVRCYAFSPPRGLWSKALQEYSQSFIVSLVLGKDVIPRLSVTNLEDLKRRILRVVA 388
YP ++C+A+SPP GL S+ EYS+ F+ ++VLGKD++PR+ ++ LE +R++L V+
Sbjct: 487 PQYPTLKCFAYSPPGGLLSEDAMEYSKEFVTAVVLGKDLVPRIGLSQLEGFRRQLLDVLQ 546
Query: 389 HCNKPKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSS 448
KPK++I++ G +P + EV T L L T S S
Sbjct: 547 RSTKPKWRIIV---------GATKCIPKSELPEEVEVTT---LASTRLWTHPSDLTIALS 594
Query: 449 DSPLDSSPKYPPLYPPGRIIHLQEEGASGRFGCCSAAH--YSAKWSHEAEFSKILIGPKM 506
S PLYPPGRIIH+ + + CC Y A W F++++I P M
Sbjct: 595 AS--------TPLYPPGRIIHVVHNHPAEQCCCCEQEEPTYFAIWGDNKAFNEVIISPAM 646
Query: 507 LTDHMPDILMRALDSVVSD----RAACVSCPAQGVSSVDV 542
L +H+P ++M L+ V+ + + A +S VS +V
Sbjct: 647 LHEHLPYVVMEGLNKVLENYNKGKTALLSAAKVMVSPTEV 686
Score = 74.3 bits (181), Expect = 3e-13
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 1 MPGMVLFGRRWAIASDDLVFPGFFELVVRVLWWI--GILTLYLMHRGKLDCAGGALLSSY 58
MPG+V+F RRW++ SDDLV P F ++ W++ ++ L++ C+ L+
Sbjct: 1 MPGIVVFRRRWSVGSDDLVLPAIFLFLLHTTWFVILSVVLFGLVYNPHEACSLN-LVDHG 59
Query: 59 LIVLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMVWASLGAAW 118
L ILL+ +I + AI+ +SMRG I PR SM +LY+RLA+ E ++A +G W
Sbjct: 60 RGYLGILLSCMIAEM-AIIWLSMRGGILYTEPRDSMQYVLYVRLAILVIEFIYAIVGIVW 118
Query: 119 V 119
+
Sbjct: 119 L 119
>gi|109659839 solute carrier family 5 (sodium/glucose
cotransporter), member 10 isoform 1 [Homo sapiens]
Length = 612
Score = 37.4 bits (85), Expect = 0.035
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 51 GGALLSSYLIVLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMV 110
GG + YL VL +LL+V + ++ IC G +S +L + + + +
Sbjct: 129 GGQRIRMYLSVLSLLLSVFTKISLDLYAGALFVHICL-GWNFYLSTILTLGITALYT--I 185
Query: 111 WASLGAAWVADGVQCDRTVVNGIIATVVVRTQIWCPATLRRASPCFISNRTISGTTKSLP 170
L A D +Q VV +I T+ QI L A I +RTI+ TT LP
Sbjct: 186 AGGLAAVIYTDALQTLIMVVGAVILTIKAFDQIGGYGQLEAAYAQAIPSRTIANTTCHLP 245
Query: 171 RWSAM 175
R AM
Sbjct: 246 RTDAM 250
>gi|109659836 solute carrier family 5 (sodium/glucose
cotransporter), member 10 isoform 2 [Homo sapiens]
Length = 596
Score = 37.4 bits (85), Expect = 0.035
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 51 GGALLSSYLIVLMILLAVVICTVSAIMCVSMRGTICNPGPRKSMSKLLYIRLALFFPEMV 110
GG + YL VL +LL+V + ++ IC G +S +L + + + +
Sbjct: 129 GGQRIRMYLSVLSLLLSVFTKISLDLYAGALFVHICL-GWNFYLSTILTLGITALYT--I 185
Query: 111 WASLGAAWVADGVQCDRTVVNGIIATVVVRTQIWCPATLRRASPCFISNRTISGTTKSLP 170
L A D +Q VV +I T+ QI L A I +RTI+ TT LP
Sbjct: 186 AGGLAAVIYTDALQTLIMVVGAVILTIKAFDQIGGYGQLEAAYAQAIPSRTIANTTCHLP 245
Query: 171 RWSAM 175
R AM
Sbjct: 246 RTDAM 250
>gi|13376339 plasticity-related protein 2 [Homo sapiens]
Length = 746
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 25/171 (14%)
Query: 360 SLVLGKDVIPRLSVTNLEDLKRRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELD 419
++V +PR S +L+D RR + + + + K L+ + G LP +
Sbjct: 397 NMVTFSHTLPRASAPSLDDPARRHMTIHVPLDASRSKQLISEWKQKSLEGRGLGLPDDAS 456
Query: 420 GGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYP---------------- 463
G +P+ E+ + D P P LYP
Sbjct: 457 PGHLRAPAEPMAEEEE--EEEDEEEEEEEEEEEDEGPAPPSLYPTVQARPGLGPRVILPP 514
Query: 464 ---PGRIIHLQEEGASGRFGCC--SAAHYSAKWSHEAEFSKILIG--PKML 507
P ++H+ EEGA G S A AKW AE S + P++L
Sbjct: 515 RAGPPPLVHIPEEGAQTGAGLSPKSGAGVRAKWLMMAEKSGAAVANPPRLL 565
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 402 LWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAY 444
L+ E+FGG P N+ +G DQE L QP ++ P+Y
Sbjct: 1077 LFCEMFGGKPRNMVLSPEGEDQESLLQPDQPSPEFPFQYDPSY 1119
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 402 LWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAY 444
L+ E+FGG P N+ +G DQE L QP ++ P+Y
Sbjct: 1077 LFCEMFGGKPRNMVLSPEGEDQESLLQPDQPSPEFPFQYDPSY 1119
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 402 LWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAY 444
L+ E+FGG P N+ +G DQE L QP ++ P+Y
Sbjct: 1077 LFCEMFGGKPRNMVLSPEGEDQESLLQPDQPSPEFPFQYDPSY 1119
>gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]
Length = 1178
Score = 32.7 bits (73), Expect = 0.87
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 167 KSLPRWSAMPQGAP------SCRSRTTDYDLVGGDQ-LNCHFGSILHTTGLQYRDFIHVS 219
++L R+ P G P SCRS + L GD+ C RD IHV
Sbjct: 563 ENLVRYKKEPSGCPVCGKVFSCRSNMNKHLLTHGDKKYTCEICGRKFFRVDVLRDHIHVH 622
Query: 220 FHDKVYELPFLVAL--DHRKESVVVAVRGTMSLQDVLTDLSAESEVLDVECE 269
F D +AL DH++E + + + D +D SA+SE C+
Sbjct: 623 FKD--------IALMDDHQREEFIGKIGISSEENDDNSDESADSEPHKYSCK 666
>gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]
Length = 1507
Score = 32.7 bits (73), Expect = 0.87
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 167 KSLPRWSAMPQGAP------SCRSRTTDYDLVGGDQ-LNCHFGSILHTTGLQYRDFIHVS 219
++L R+ P G P SCRS + L GD+ C RD IHV
Sbjct: 892 ENLVRYKKEPSGCPVCGKVFSCRSNMNKHLLTHGDKKYTCEICGRKFFRVDVLRDHIHVH 951
Query: 220 FHDKVYELPFLVAL--DHRKESVVVAVRGTMSLQDVLTDLSAESEVLDVECE 269
F D +AL DH++E + + + D +D SA+SE C+
Sbjct: 952 FKD--------IALMDDHQREEFIGKIGISSEENDDNSDESADSEPHKYSCK 995
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 430 LLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPP 464
LL S + SP+YS S SP SSP PP PP
Sbjct: 172 LLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPP 206
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 30.4 bits (67), Expect = 4.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 430 LLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPP 464
LL S + SP+YS S SP SSP PP PP
Sbjct: 172 LLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPP 206
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 30.0 bits (66), Expect = 5.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 455 SPKYPPLYPPGRIIHLQEEGASGRFGCCSAAHYSAKWSHEAEFSKILIGP 504
SP +P YPPG +G G S ++ + SH+ +L+GP
Sbjct: 59 SPAWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLDWLLLGP 108
>gi|29648315 small G protein signaling modulator 3 [Homo sapiens]
Length = 749
Score = 30.0 bits (66), Expect = 5.6
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 41/168 (24%)
Query: 235 HRKESVVVAVRGTMSLQDVLTDLSAESEVLDVECEVQDRLAHKGISQAARYVYQRLINDG 294
H KE ++ + S+ + L+D+ ++ E ++ V RLA A ++ +
Sbjct: 318 HLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHL--- 374
Query: 295 ILSQAFSIAPEYRLVIVGHSLGGGAAALLATMLRAAYPQVRCYAFSPPRGLWSKALQEYS 354
A+ IA + G LG G L+ ++R +
Sbjct: 375 ----AYLIADQ------GQLLGAGTLTNLSQVVRRR--------------------TQRR 404
Query: 355 QSFIVSLVLGKDVIPRLSVTNLE------DLKRRILRVVAH--CNKPK 394
+S I +L+ G+D + L N++ DL+ ILRV H C PK
Sbjct: 405 KSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPK 452
>gi|28329436 aprataxin isoform a [Homo sapiens]
Length = 342
Score = 29.6 bits (65), Expect = 7.4
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 367 VIPRLSVTNLEDLK--RRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDGGDQE 424
VI R T + D K R+ +++ A CNK K+ + G NP ++ + + G DQE
Sbjct: 26 VIGRGPETKITDKKCSRQQVQLKAECNKGYVKV-------KQVGVNPTSIDSVVIGKDQE 78
Query: 425 VLTQP 429
V QP
Sbjct: 79 VKLQP 83
>gi|28329430 aprataxin isoform b [Homo sapiens]
Length = 306
Score = 29.6 bits (65), Expect = 7.4
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 367 VIPRLSVTNLEDLK--RRILRVVAHCNKPKYKILLHGLWYELFGGNPNNLPTELDGGDQE 424
VI R T + D K R+ +++ A CNK K+ + G NP ++ + + G DQE
Sbjct: 40 VIGRGPETKITDKKCSRQQVQLKAECNKGYVKV-------KQVGVNPTSIDSVVIGKDQE 92
Query: 425 VLTQP 429
V QP
Sbjct: 93 VKLQP 97
>gi|171460958 nucleolar protein 10 [Homo sapiens]
Length = 688
Score = 29.6 bits (65), Expect = 7.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 120 ADGVQCDRTVVNGIIATVVV--RTQIWCPATLRRAS--PCFISNRTISGTTKSLPRWSAM 175
A+ CD V+G+ AT + R + W P T R C +++ T SLP SA+
Sbjct: 177 AENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINSLPTISAL 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,138,039
Number of Sequences: 37866
Number of extensions: 952647
Number of successful extensions: 2854
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2834
Number of HSP's gapped (non-prelim): 20
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.