Guide to the Human Genome
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Name: TPRA1 Sequence: fasta or formatted (293aa) NCBI GI: 217416360
Description:

G protein-coupled receptor 175 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [373aa] G protein-coupled receptor 175 isoform 1
alt prot [373aa] G protein-coupled receptor 175 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         23           2
 C cysteine            3.4         10           1
 D aspartate           2.7          8           1
 E glutamate           3.1          9           2
 F phenylalanine       4.8         14           3
 G glycine             8.2         24           2
 H histidine           2.4          7           1
 I isoleucine          6.5         19           2
 K lysine              1.7          5           1
 L leucine            17.4         51           4
 M methionine          1.0          3           1
 N asparagine          2.0          6           1
 P proline             6.5         19           3
 Q glutamine           2.0          6           1
 R arginine            7.2         21           2
 S serine              7.2         21           2
 T threonine           5.5         16           2
 V valine              6.5         19           2
 W tryptophan          2.0          6           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 175 isoform 2 
TPRA1                 0.657   G protein-coupled receptor 175 isoform 1 
TPRA1                 0.657   G protein-coupled receptor 175 isoform 1 
LOC344595             0.012   PREDICTED: hypothetical protein 
LOC344595             0.012   PREDICTED: hypothetical protein 
LOC344595             0.012   PREDICTED: hypothetical protein 
RSL1D1                0.012   ribosomal L1 domain containing 1 
OTOA                  0.011   otoancorin isoform 3 
OTOA                  0.011   otoancorin isoform 1 
LCE2D                 0.009   late cornified envelope 2D 
TTLL10                0.009   tubulin tyrosine ligase-like family, member 10 isof...
SLC26A11              0.007   solute carrier family 26, member 11 
LOC652493             0.007   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
POLRMT                0.007   mitochondrial DNA-directed RNA polymerase precursor...
NEUROG3               0.007   neurogenin 3 
RNF31                 0.007   ring finger protein 31 
CRELD1                0.007   cysteine-rich with EGF-like domains 1 isoform 3 [Ho...
CRELD1                0.007   cysteine-rich with EGF-like domains 1 isoform 1 [Hom...
CRELD1                0.007   cysteine-rich with EGF-like domains 1 isoform 2 [Hom...
TAS2R7                0.007   taste receptor, type 2, member 7 
C7orf43               0.005   hypothetical protein LOC55262 
GPR171                0.005   G protein-coupled receptor 171 
OR51S1                0.005   olfactory receptor, family 51, subfamily S, member 1...
CHD7                  0.005   chromodomain helicase DNA binding protein 7 
NTF4                  0.005   neurotrophin 5 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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