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Name: STRA6 Sequence: fasta or formatted (159aa) NCBI GI: 217330586
Description:

stimulated by retinoic acid gene 6 homolog isoform c

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [667aa] stimulated by retinoic acid gene 6 homolog isoform a
alt prot [667aa] stimulated by retinoic acid gene 6 homolog isoform a
alt prot [667aa] stimulated by retinoic acid gene 6 homolog isoform a
alt prot [658aa] stimulated by retinoic acid gene 6 homolog isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         14           2
 C cysteine            2.5          4           1
 D aspartate           5.0          8           1
 E glutamate           5.7          9           2
 F phenylalanine       1.9          3           1
 G glycine             7.5         12           2
 H histidine           1.3          2           1
 I isoleucine          3.1          5           1
 K lysine              1.3          2           1
 L leucine            15.7         25           4
 M methionine          1.9          3           1
 N asparagine          1.3          2           1
 P proline            11.3         18           2
 Q glutamine           3.8          6           1
 R arginine            6.3         10           3
 S serine              8.8         14           2
 T threonine           3.8          6           1
 V valine              5.7          9           1
 W tryptophan          1.9          3           1
 Y tyrosine            2.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stimulated by retinoic acid gene 6 homolog isoform ... 
STRA6                 0.901   stimulated by retinoic acid gene 6 homolog isoform ...
STRA6                 0.901   stimulated by retinoic acid gene 6 homolog isoform ...
STRA6                 0.901   stimulated by retinoic acid gene 6 homolog isoform ...
STRA6                 0.815   stimulated by retinoic acid gene 6 homolog isoform ...
MAVS                  0.010   virus-induced signaling adapter 
IL27RA                0.010   class I cytokine receptor 
CDH22                 0.010   cadherin 22 precursor 
FLJ10357              0.007   hypothetical protein LOC55701 
DSG3                  0.007   desmoglein 3 preproprotein 
ZNF509                0.007   zinc finger protein 509 
INTS2                 0.007   integrator complex subunit 2 
CYB5R3                0.007   cytochrome b5 reductase 3 isoform m 
CYB5R3                0.007   cytochrome b5 reductase 3 isoform s 
CYB5R3                0.007   cytochrome b5 reductase 3 isoform s 
GPRASP1               0.007   G protein-coupled receptor associated sorting prote...
GPRASP1               0.007   G protein-coupled receptor associated sorting prote...
GPRASP1               0.007   G protein-coupled receptor associated sorting prote...
TIAM2                 0.007   T-cell lymphoma invasion and metastasis 2 isoform a ...
DMRT3                 0.007   doublesex and mab-3 related transcription factor 3 [...
ARHGAP30              0.007   Rho GTPase activating protein 30 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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