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Search of human proteins with 217272835
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217272835 nuclear transcription factor Y, gamma isoform 5
[Homo sapiens]
(301 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Ho... 588 e-168
gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Hom... 570 e-163
gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Ho... 564 e-161
gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Ho... 559 e-159
gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Ho... 479 e-135
gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens] 64 1e-10
gi|8393116 chromatin accessibility complex 1 [Homo sapiens] 59 5e-09
gi|18426973 DR1-associated protein 1 [Homo sapiens] 56 4e-08
gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo... 52 5e-07
gi|38788274 bromodomain PHD finger transcription factor isoform ... 48 9e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 47 3e-05
gi|221139761 zinc finger protein 853 [Homo sapiens] 45 8e-05
gi|38788260 bromodomain PHD finger transcription factor isoform ... 44 1e-04
gi|93141033 PAX interacting protein 1 [Homo sapiens] 42 5e-04
gi|110347429 mediator complex subunit 12 [Homo sapiens] 42 5e-04
gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Hom... 42 7e-04
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 40 0.003
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 40 0.003
gi|44890059 involucrin [Homo sapiens] 39 0.006
gi|33286444 mastermind-like 2 [Homo sapiens] 39 0.007
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 38 0.010
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 38 0.010
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 38 0.010
gi|4507379 TATA box binding protein [Homo sapiens] 38 0.010
gi|56549696 E1A binding protein p400 [Homo sapiens] 38 0.010
gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens] 38 0.013
gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens] 38 0.013
gi|38570099 glutamine-rich 1 [Homo sapiens] 37 0.021
gi|38570097 glutamine-rich 1 [Homo sapiens] 37 0.021
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 37 0.028
>gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Homo
sapiens]
Length = 301
Score = 588 bits (1515), Expect = e-168
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNA 240
AQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNA
Sbjct: 181 AQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNA 240
Query: 241 QQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG 300
QQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG
Sbjct: 241 QQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG 300
Query: 301 D 301
D
Sbjct: 301 D 301
>gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Homo
sapiens]
Length = 335
Score = 570 bits (1470), Expect = e-163
Identities = 301/335 (89%), Positives = 301/335 (89%), Gaps = 34/335 (10%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQ----------------------------------GQTMQVMQQIITNTGEIQQIP 206
AQPQQ GQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 300
Query: 267 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 335
>gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Homo
sapiens]
Length = 334
Score = 564 bits (1453), Expect = e-161
Identities = 300/335 (89%), Positives = 300/335 (89%), Gaps = 35/335 (10%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQ----------------------------------GQTMQVMQQIITNTGEIQQIP 206
AQPQQ GQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG QLYQ
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG-QLYQ 299
Query: 267 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 300 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
>gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Homo
sapiens]
Length = 354
Score = 559 bits (1440), Expect = e-159
Identities = 301/354 (85%), Positives = 301/354 (85%), Gaps = 53/354 (14%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQ----------------------------------GQTMQVMQQIITNTGEIQQIP 206
AQPQQ GQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ-------------------QITQTE 247
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ QITQTE
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
Query: 248 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
>gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Homo
sapiens]
Length = 297
Score = 479 bits (1232), Expect = e-135
Identities = 263/335 (78%), Positives = 263/335 (78%), Gaps = 72/335 (21%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK- 59
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
RNDIAMAITKFDQFDFLIDIVPR
Sbjct: 60 -------------------------------------RNDIAMAITKFDQFDFLIDIVPR 82
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 83 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 142
Query: 181 AQPQQGQT----------------------------------MQVMQQIITNTGEIQQIP 206
AQPQQGQT MQVMQQIITNTGEIQQIP
Sbjct: 143 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 202
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ
Sbjct: 203 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 262
Query: 267 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 263 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 297
>gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens]
Length = 117
Score = 64.3 bits (155), Expect = 1e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 TVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKR 93
+V R+ LPLAR+K ++K D DV + EA + A+AA++F+ + A+ + KR
Sbjct: 32 SVPGARLSRLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKR 91
Query: 94 RTLQRNDIAMAITKFDQFDFL 114
+TLQR D+ AI D+F FL
Sbjct: 92 KTLQRRDLDNAIEAVDEFAFL 112
>gi|8393116 chromatin accessibility complex 1 [Homo sapiens]
Length = 131
Score = 58.9 bits (141), Expect = 5e-09
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 39 RVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQR 98
R+ LPL+RI+ IMK +V I+ EA VL AKA ++F+ L ++ H +++ L
Sbjct: 15 RLISLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTY 74
Query: 99 NDIAMAITKFDQFDFLIDIVPR--------DELKPPKRQEE 131
+D+A + + F FL DI+P+ LK KR+E+
Sbjct: 75 SDLANTAQQSETFQFLADILPKKILASKYLKMLKEEKREED 115
>gi|18426973 DR1-associated protein 1 [Homo sapiens]
Length = 205
Score = 55.8 bits (133), Expect = 4e-08
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103
P ARIKKIM+ DE++ ++A PV+ ++A ++F+ L +A T+ +T+ + +
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQ 72
Query: 104 AITKFDQFDFLIDIV 118
I QFDFL D+V
Sbjct: 73 CIELEQQFDFLKDLV 87
>gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo
sapiens]
Length = 347
Score = 52.4 bits (124), Expect = 5e-07
Identities = 57/162 (35%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
Query: 154 AVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQ-----------QIITNTGEI 202
A Q+Q QQQG T T Q+ A QQ QT+QV+Q Q+IT+TG
Sbjct: 19 AGQIQQQQQGGVTAVQLQT--EAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTG-- 74
Query: 203 QQIPVQLNAGQLQYIRLAQPVSGTQVVQ-------GQIQTLATNAQQITQTEVQQGQQQF 255
Q I VQ G + PVSGTQ +Q GQIQ Q Q + QQGQ Q
Sbjct: 75 QPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQ---IQGGQAVQVQGQQGQTQ- 130
Query: 256 SQFTDGQQLYQIQQVTMPAGQDLAQPMFI---QSANQPSDGQ 294
Q + Q Q + AGQ Q Q Q ++GQ
Sbjct: 131 ------QIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQ 166
Score = 42.0 bits (97), Expect = 7e-04
Identities = 49/156 (31%), Positives = 62/156 (39%), Gaps = 35/156 (22%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIP 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT Q++ IQQ
Sbjct: 89 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQII---------IQQPQ 138
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
+ AGQ Q TQ Q +A QQ+ QT Q DG L Q
Sbjct: 139 TAVTAGQTQ----------TQ------QQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQ 182
Query: 267 IQ-----QVTMPAGQDLAQPMFIQ---SANQPSDGQ 294
+ +T+PA LA +Q + N S GQ
Sbjct: 183 VTVPVSGMITIPAA-SLAGAQIVQTGANTNTTSSGQ 217
Score = 32.0 bits (71), Expect = 0.69
Identities = 40/130 (30%), Positives = 51/130 (39%), Gaps = 27/130 (20%)
Query: 192 MQQIITNTGE-IQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQI--QTLATNAQQITQTEV 248
M+Q N+ +QI VQ AGQ+Q Q G VQ Q Q + + QQ+ +V
Sbjct: 1 MEQYTANSNSSTEQIVVQ--AGQIQQ----QQQGGVTAVQLQTEAQVASASGQQVQTLQV 54
Query: 249 QQGQQQFSQFTDGQ-----------------QLYQIQQVTMPAGQDLAQPMFIQSAN-QP 290
QGQ Q + GQ Q I QV + Q L Q + Q
Sbjct: 55 VQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQI 114
Query: 291 SDGQAPQVTG 300
GQA QV G
Sbjct: 115 QGGQAVQVQG 124
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 48.1 bits (113), Expect = 9e-06
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 36/186 (19%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQ---QTTSSTTTI--------- 173
P +Q +V+ + + P+Q + +L Q P+ Q Q Q Q Q QT SS T+
Sbjct: 2361 PGQQSQVQTTTSQPIPIQPHTSL-QIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPS 2419
Query: 174 -------QPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPV--- 223
QP +IA PQ Q +QV+ QI + + QI Q +G Q I+L P+
Sbjct: 2420 RPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQV--VAQIQAQ-QSGVPQQIKLQLPIQIQ 2476
Query: 224 SGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMF 283
+ V QIQ + T + VQ+ Q+ Q D QQ + QQ+ ++ +
Sbjct: 2477 QSSAVQTHQIQNVVT----VQAASVQEQLQRVQQLRDQQQKKKQQQI------EIKREHT 2526
Query: 284 IQSANQ 289
+Q++NQ
Sbjct: 2527 LQASNQ 2532
Score = 44.3 bits (103), Expect = 1e-04
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 39/206 (18%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2086 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2142
Query: 186 GQ---TMQVMQQIITNTGEIQQIPVQL-----NAGQLQYIR---LAQPVSGTQVVQ---- 230
GQ TM + Q+ G Q + V + GQLQ I P G Q++Q
Sbjct: 2143 GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMP 2202
Query: 231 -GQIQ------------TLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQD 277
G +Q T +T ++ T G+Q+ S+ + Q++ Q T+P Q
Sbjct: 2203 NGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVH--QDKTLPPAQS 2260
Query: 278 L------AQPMFIQSANQPSDGQAPQ 297
AQP Q + QP PQ
Sbjct: 2261 SSVGPAEAQPQTAQPSAQPQPQTQPQ 2286
Score = 35.8 bits (81), Expect = 0.048
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 152 PTAVQVQGQQQGQQTTSSTTTIQPGQII----IAQPQQGQTMQVMQQIITNTGEIQQIPV 207
P+ + Q Q Q TTS IQP + QPQ +Q Q +++ + Q+ V
Sbjct: 2356 PSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTV 2415
Query: 208 QLNAGQLQYIRLAQP-VSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
+ I+ QP V +Q Q+Q L+ Q+ ++Q Q Q Q Q
Sbjct: 2416 SSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVV-AQIQAQQSGVPQQIKLQLPIQ 2474
Query: 267 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
IQQ + + + +Q+A+ Q Q D
Sbjct: 2475 IQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRD 2509
Score = 30.0 bits (66), Expect = 2.6
Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQ-TMQVMQQIITNTGEIQQIPVQ 208
Q+PT + T+S+T+TI P Q ++ P G T + T G + Q
Sbjct: 1923 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 1979
Query: 209 LNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ----ITQTEVQQGQQQFSQFTDGQQL 264
N Q T V QGQ + QQ I + QQ F+ F
Sbjct: 1980 QNKNFHQ-------TFATWVKQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTAT 2032
Query: 265 YQIQQVTMPAG 275
I+ T +G
Sbjct: 2033 VTIRPNTSGSG 2043
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 46.6 bits (109), Expect = 3e-05
Identities = 55/204 (26%), Positives = 77/204 (37%), Gaps = 29/204 (14%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEP---------VQYYFTLAQQPTAVQVQGQQQGQQTT-- 167
P+ + P Q + Q ++P P Q Q P A+ QG + T
Sbjct: 3773 PQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQS 3832
Query: 168 ---SSTTTIQPGQ------IIIAQPQQGQTMQVMQQIITNTGEIQQIPV------QLNA- 211
SS Q GQ ++ AQ QQ Q Q + +QQ + +L+A
Sbjct: 3833 RVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQ 3892
Query: 212 --GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
G LQ ++ Q + Q +Q Q Q QQ+ Q ++QQ QQQ QQ Q QQ
Sbjct: 3893 PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQ 3952
Query: 270 VTMPAGQDLAQPMFIQSANQPSDG 293
+ Q Q F Q Q G
Sbjct: 3953 QQLQQQQQQQQQQFQQQQQQQQMG 3976
Score = 41.2 bits (95), Expect = 0.001
Identities = 55/164 (33%), Positives = 67/164 (40%), Gaps = 26/164 (15%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQP---------TAVQVQGQQQGQQTTSSTTTIQPG 176
P RQ + QS + P LAQQ TA Q Q QQQ QQ S
Sbjct: 3823 PHRQVLMTQSRVLSSP-----QLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQ 3877
Query: 177 QIII---------AQPQQG-QTMQVMQQIITNTGEIQQIPVQLNAGQ-LQYIRLAQPVSG 225
Q ++ AQP Q +Q QQ+ QQ QL Q LQ +L Q
Sbjct: 3878 QSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQ 3937
Query: 226 TQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
Q+ Q Q Q L QQ+ Q + QQ QQQF Q QQ+ + Q
Sbjct: 3938 QQLQQQQQQQLQQQQQQLQQQQQQQ-QQQFQQQQQQQQMGLLNQ 3980
Score = 31.6 bits (70), Expect = 0.90
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQL 209
QQ Q Q QQQ QQ +Q Q+ QQ Q Q+ QQ QQ +Q
Sbjct: 3903 QQQLQQQQQLQQQQQQQLQQQQQLQQQQL----QQQQQQQQLQQQ--------QQQQLQQ 3950
Query: 210 NAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQ 253
QLQ + Q Q Q Q L ++ + + QQ QQ
Sbjct: 3951 QQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQ 3994
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 45.1 bits (105), Expect = 8e-05
Identities = 53/173 (30%), Positives = 68/173 (39%), Gaps = 6/173 (3%)
Query: 129 QEEVRQSVTPAE--PVQYYFTLAQQPTAVQVQGQQ--QGQQTTSSTTTIQPGQIIIAQPQ 184
Q+E QSV E P QQ QVQ QQ Q QQ T Q Q++ Q Q
Sbjct: 134 QQEKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQ 193
Query: 185 QGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQIT 244
Q +Q Q + ++QQ + QLQ + Q Q+ Q Q L Q+
Sbjct: 194 LQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQ--QQEQLQQQQQLLLLQQQGQLQ 251
Query: 245 QTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 297
Q +QQ Q Q Q QQ Q+QQ + Q+ Q Q Q Q Q
Sbjct: 252 QQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQ 304
Score = 43.5 bits (101), Expect = 2e-04
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 118 VPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQ---QTTSSTTTIQ 174
V ELKP + +Q + P + VQ L QQ +Q Q Q+ Q Q +Q
Sbjct: 141 VHHQELKPELQLMHQQQQLQPQQ-VQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQ 199
Query: 175 PGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQ 234
Q++ Q +Q Q Q++QQ ++QQ Q QLQ + Q + Q Q Q Q
Sbjct: 200 EQQLLQQQQEQLQQQQLLQQ----QEQLQQQQFQQQQEQLQ--QQQQLLLLQQQGQLQQQ 253
Query: 235 TLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
L Q+ Q ++Q Q Q Q QQ Q+QQ
Sbjct: 254 LLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQ 288
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 44.3 bits (103), Expect = 1e-04
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 39/206 (18%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2212 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2268
Query: 186 GQ---TMQVMQQIITNTGEIQQIPVQL-----NAGQLQYIR---LAQPVSGTQVVQ---- 230
GQ TM + Q+ G Q + V + GQLQ I P G Q++Q
Sbjct: 2269 GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMP 2328
Query: 231 -GQIQ------------TLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQD 277
G +Q T +T ++ T G+Q+ S+ + Q++ Q T+P Q
Sbjct: 2329 NGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVH--QDKTLPPAQS 2386
Query: 278 L------AQPMFIQSANQPSDGQAPQ 297
AQP Q + QP PQ
Sbjct: 2387 SSVGPAEAQPQTAQPSAQPQPQTQPQ 2412
Score = 30.0 bits (66), Expect = 2.6
Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQ-TMQVMQQIITNTGEIQQIPVQ 208
Q+PT + T+S+T+TI P Q ++ P G T + T G + Q
Sbjct: 2049 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 2105
Query: 209 LNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ----ITQTEVQQGQQQFSQFTDGQQL 264
N Q T V QGQ + QQ I + QQ F+ F
Sbjct: 2106 QNKNFHQ-------TFATWVKQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTAT 2158
Query: 265 YQIQQVTMPAG 275
I+ T +G
Sbjct: 2159 VTIRPNTSGSG 2169
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 42.4 bits (98), Expect = 5e-04
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++Q+++ Q P +P P + Q Q QQQ S +Q Q + PQQ
Sbjct: 430 QQQQQISQQPYPQQP--------PHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQL 481
Query: 187 QTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQT 246
Q Q +QQ QL QLQ +LAQ ++Q Q Q QQI Q
Sbjct: 482 HRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQ------QQIQQQ 535
Query: 247 EVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 297
++Q+ QQ QQ Q+Q T P +Q + Q Q Q Q
Sbjct: 536 QLQRMHQQ-------QQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQ 579
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/186 (26%), Positives = 68/186 (36%), Gaps = 18/186 (9%)
Query: 115 IDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQ 174
+ + P + ++Q + +Q P L QP + QQQ QQ + Q
Sbjct: 392 VKVTPETHMLQQQQQAQQQQQQHPV--------LHLQPQQIMQLQQQQQQQISQQPYPQQ 443
Query: 175 PGQIIIAQPQQGQTM---QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQG 231
P Q QQ Q Q QQ + + P QL+ Q Q QP +Q
Sbjct: 444 PPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQ----LQPFQQQHALQQ 499
Query: 232 QIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPS 291
Q L Q+ Q ++ Q QQQ S QQ QIQQ + Q +QS P
Sbjct: 500 QFHQL--QQHQLQQQQLAQLQQQHS-LLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPH 556
Query: 292 DGQAPQ 297
Q Q
Sbjct: 557 LSQTSQ 562
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 42.4 bits (98), Expect = 5e-04
Identities = 47/153 (30%), Positives = 59/153 (38%), Gaps = 29/153 (18%)
Query: 147 TLAQQP-----TAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGE 201
TL Q P T + QG Q G ++T+ I+ + QQ Q Q QQ +
Sbjct: 2020 TLQQTPMISTMTPMSAQGVQAGVRSTA----------ILPEQQQQQQQQQQQQ------Q 2063
Query: 202 IQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG 261
QQ Q Q +IR Q Q QI QQ Q + QQ QQQ Q
Sbjct: 2064 QQQQQQQQQQQQQYHIRQQQ--------QQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQ 2115
Query: 262 QQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 294
Q Q QQ P Q +QP F + Q + Q
Sbjct: 2116 HQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQ 2148
Score = 33.5 bits (75), Expect = 0.24
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++Q++ +Q + QY+ QQ ++ Q QQQ QQ Q Q Q QQ
Sbjct: 2060 QQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQ--------QQQQQQQQQQQQQ 2111
Query: 187 QTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQT 246
Q Q QQ Q P Q Q ++ Q T + Q+Q +N Q T
Sbjct: 2112 QQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPST 2171
Query: 247 EV 248
+
Sbjct: 2172 NI 2173
Score = 29.3 bits (64), Expect = 4.4
Identities = 48/191 (25%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Query: 119 PRDELKPPKRQEEVRQSVTPA------EPVQYYFTLAQQPTA-VQVQGQQQGQQTTSST- 170
P + PP + QS P+ +P ++ L Q+P+ V Q G TS+
Sbjct: 1959 PAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRH---LQQRPSGYVHQQAPTYGHGLTSTQR 2015
Query: 171 ----TTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGT 226
T Q I P Q +Q + E QQ Q Q Q
Sbjct: 2016 FSHQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQ---------- 2065
Query: 227 QVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQS 286
Q Q Q Q + +Q Q ++ + QQQ Q QQ Q QQ Q Q +
Sbjct: 2066 QQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAA 2125
Query: 287 ANQPSDGQAPQ 297
QP PQ
Sbjct: 2126 PPQPQPQSQPQ 2136
>gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Homo
sapiens]
Length = 318
Score = 42.0 bits (97), Expect = 7e-04
Identities = 49/156 (31%), Positives = 62/156 (39%), Gaps = 35/156 (22%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIP 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT Q++ IQQ
Sbjct: 60 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQII---------IQQPQ 109
Query: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
+ AGQ Q TQ Q +A QQ+ QT Q DG L Q
Sbjct: 110 TAVTAGQTQ----------TQ------QQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQ 153
Query: 267 IQ-----QVTMPAGQDLAQPMFIQ---SANQPSDGQ 294
+ +T+PA LA +Q + N S GQ
Sbjct: 154 VTVPVSGMITIPAA-SLAGAQIVQTGANTNTTSSGQ 188
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 40.0 bits (92), Expect = 0.003
Identities = 45/141 (31%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 163 GQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLN---AGQLQYIRL 219
G T QPG +I PQ M Q N G PVQL+ A L Y L
Sbjct: 141 GGPTPPQMPPSQPGALIPGDPQ------AMSQ--PNRGPSPFSPVQLHQLRAQILAYKML 192
Query: 220 AQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLA 279
A+ + +Q +Q T Q + QQ QQQ Q QQ QQ P Q
Sbjct: 193 ARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQ 252
Query: 280 QPMFIQSANQPSDGQAPQVTG 300
QP + + N+PS G P+++G
Sbjct: 253 QPALV-NYNRPS-GPGPELSG 271
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 40.0 bits (92), Expect = 0.003
Identities = 45/141 (31%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 163 GQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLN---AGQLQYIRL 219
G T QPG +I PQ M Q N G PVQL+ A L Y L
Sbjct: 141 GGPTPPQMPPSQPGALIPGDPQ------AMSQ--PNRGPSPFSPVQLHQLRAQILAYKML 192
Query: 220 AQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLA 279
A+ + +Q +Q T Q + QQ QQQ Q QQ QQ P Q
Sbjct: 193 ARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQ 252
Query: 280 QPMFIQSANQPSDGQAPQVTG 300
QP + + N+PS G P+++G
Sbjct: 253 QPALV-NYNRPS-GPGPELSG 271
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 38.9 bits (89), Expect = 0.006
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+LK + QE Q P E + L QQ ++ QQ+ Q Q GQ+
Sbjct: 262 QLKHLEHQEG--QLEVPEEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQ---QMGQLKHL 316
Query: 182 QPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQ-PVSGTQVVQGQIQTLATNA 240
+ Q+GQ + QQ G+++Q+ Q GQL+++ + + + +GQ+
Sbjct: 317 EQQEGQPKHLEQQ----EGQLEQLEEQ--EGQLKHLEQQEGQLEHLEHQEGQLGLPEQQV 370
Query: 241 QQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
Q+ Q E QQGQ + + +GQ + +QQ
Sbjct: 371 LQLKQLEKQQGQPKHLEEEEGQLKHLVQQ 399
Score = 37.7 bits (86), Expect = 0.013
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+L+ P++QE Q P + QQ +++ QQ+GQ Q GQ+ +
Sbjct: 222 QLELPEQQEG--QLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLEH---QEGQLEVP 276
Query: 182 QPQQGQTMQVMQQI-----ITNTGEIQQIPVQLNAGQLQYIRL--AQPVSGTQVVQGQIQ 234
+ Q GQ + QQ + + ++P Q GQL+++ QP Q +GQ++
Sbjct: 277 EEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQ-QMGQLKHLEQQEGQPKHLEQQ-EGQLE 334
Query: 235 TLATNAQQITQTEVQQGQQQFSQFTDG------QQLYQIQQVTMPAGQ 276
L Q+ E Q+GQ + + +G QQ+ Q++Q+ GQ
Sbjct: 335 QLEEQEGQLKHLEQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQ 382
Score = 32.0 bits (71), Expect = 0.69
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 148 LAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPV 207
L QQ ++ Q+GQ +Q Q+ + QQGQ + ++ G+++ +
Sbjct: 346 LEQQEGQLEHLEHQEGQLGLPEQQVLQLKQL---EKQQGQPKHLEEE----EGQLKHLVQ 398
Query: 208 QLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQI 267
Q GQL++ L Q + + Q++ L Q+ E Q+GQ + + GQ
Sbjct: 399 Q--EGQLKH--LVQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQGQLEVPE 454
Query: 268 QQVTMP 273
QQV P
Sbjct: 455 QQVGQP 460
Score = 29.3 bits (64), Expect = 4.4
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 148 LAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPV 207
L QQ ++V QQ GQ + Q+ + + Q+GQ + +Q E Q
Sbjct: 443 LEQQQGQLEVPEQQVGQPKNLEQ---EEKQLELPEQQEGQVKHLEKQ------EAQLELP 493
Query: 208 QLNAGQLQYIRLAQP-VSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
+ GQ +++ + + + GQ++ L Q+ E Q+GQ + F Q
Sbjct: 494 EQQVGQPKHLEQQEKHLEHPEQQDGQLKHLEQQEGQLKDLEQQKGQLEQPVFAPAPGQVQ 553
Query: 267 IQQVTMPAGQDLAQPMFIQSANQ 289
Q +P ++ P+ Q Q
Sbjct: 554 DIQPALPTKGEVLLPVEHQQQKQ 576
Score = 28.5 bits (62), Expect = 7.6
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 31/154 (20%)
Query: 116 DIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQP 175
++V RDE K+++ + P + + L QQ ++ QQ+GQ Q
Sbjct: 137 ELVKRDEQLGMKKEQLLE---LPEQQEGHLKHLEQQEGQLKHPEQQEGQLELPEQ---QE 190
Query: 176 GQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 235
GQ+ + + Q+GQ ++P Q GQL+ + +GQ++
Sbjct: 191 GQLELPEQQEGQL---------------ELPEQ-QEGQLEL---------PEQQEGQLEL 225
Query: 236 LATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
Q+ + Q+GQ + S+ +GQ QQ
Sbjct: 226 PEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQ 259
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 38.5 bits (88), Expect = 0.007
Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 21/138 (15%)
Query: 174 QPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQI 233
+P + Q QQ Q Q QQ QQ Q Q Q + Q S Q Q
Sbjct: 580 KPSLLHYTQQQQQQQQQQQQQ--------QQQQQQQQQQQQQQQQQQQQQSSISAQQQQQ 631
Query: 234 QTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQP------------ 281
Q + +AQQ Q + QQ QQQ Q QQ Q Q + PA +QP
Sbjct: 632 QQSSISAQQQQQQQQQQQQQQ-QQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKL 690
Query: 282 MFIQSANQPSDGQAPQVT 299
+ Q NQP G QV+
Sbjct: 691 LLQQMQNQPIAGMGYQVS 708
Score = 32.3 bits (72), Expect = 0.53
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQL 209
QQ Q Q QQQ QQ++ S Q Q I+ QQ Q Q QQ + QQ Q
Sbjct: 606 QQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQ 665
Query: 210 NAGQLQYIRLAQPVSGTQ--------VVQGQIQTLATNAQQITQTEVQQGQQQFS 256
+ Q +QP+ + + Q Q Q +A Q++Q QQ Q Q S
Sbjct: 666 PSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQ---QQRQDQHS 717
Score = 31.6 bits (70), Expect = 0.90
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++Q++ + S++ + Q QQ Q Q QQQ QQ +S P Q ++ P
Sbjct: 627 QQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPL 686
Query: 187 QTMQVMQQI 195
Q ++QQ+
Sbjct: 687 QQKLLLQQM 695
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
+ P + Q+ ++Q V + +Q L QQ AV +Q QQQ Q+ Q++ Q
Sbjct: 99 ITPQQMQQILQQQVLSPQQLQ---ALLQQQQAVMLQ-QQQLQEFYKKQQEQLHLQLLQQQ 154
Query: 183 PQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ 242
QQ Q Q QQ + QQ Q Q Q + Q G Q + Q Q
Sbjct: 155 QQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA 211
Query: 243 ITQTEVQQGQQQFSQFTDGQQLYQIQQ---VTMPAGQ 276
Q QQ Q Q Q L +Q+ +++P GQ
Sbjct: 212 AQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQ 248
Score = 36.2 bits (82), Expect = 0.036
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 17/163 (10%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
LK PK ++ R P V P +Q QQQ +Q Q ++ Q
Sbjct: 73 LKSPKSSDKQRPLQVPVS-VAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQ 131
Query: 183 PQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ 242
QQ Q QQ +Q+ +QL Q Q + Q Q Q Q QQ
Sbjct: 132 QQQLQEFYKKQQ--------EQLHLQLLQQQQQQQQQQQ--------QQQQQQQQQQQQQ 175
Query: 243 ITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQ 285
Q + QQ QQQ Q G+Q + QQ Q AQ + Q
Sbjct: 176 QQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQ 218
Score = 34.3 bits (77), Expect = 0.14
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 19/157 (12%)
Query: 150 QQPTAVQ------VQGQQQGQQTTSSTTTIQPGQIIIA---QPQQGQTMQVMQQIITNTG 200
QQ A+Q +Q Q G ++ S+ +P Q+ ++ Q T Q MQQI+
Sbjct: 53 QQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQ--- 109
Query: 201 EIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTD 260
QQ+ L+ QLQ L Q + Q Q+Q Q+ ++ Q QQQ Q
Sbjct: 110 --QQV---LSPQQLQ--ALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQ 162
Query: 261 GQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 297
QQ Q QQ Q Q Q Q QA +
Sbjct: 163 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKE 199
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
+ P + Q+ ++Q V + +Q L QQ AV +Q QQQ Q+ Q++ Q
Sbjct: 7 ITPQQMQQILQQQVLSPQQLQ---ALLQQQQAVMLQ-QQQLQEFYKKQQEQLHLQLLQQQ 62
Query: 183 PQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ 242
QQ Q Q QQ + QQ Q Q Q + Q G Q + Q Q
Sbjct: 63 QQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA 119
Query: 243 ITQTEVQQGQQQFSQFTDGQQLYQIQQ---VTMPAGQ 276
Q QQ Q Q Q L +Q+ +++P GQ
Sbjct: 120 AQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQ 156
Score = 34.3 bits (77), Expect = 0.14
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 180 IAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATN 239
+ PQQ Q Q++QQ + + ++Q + Q A LQ +L Q Q Q +Q L
Sbjct: 6 VITPQQMQ--QILQQQVLSPQQLQALLQQQQAVMLQQQQL-QEFYKKQQEQLHLQLLQQQ 62
Query: 240 AQQITQTEVQQGQQQFSQFTDGQQLYQIQQ 269
QQ Q + QQ QQQ Q QQ Q QQ
Sbjct: 63 QQQ--QQQQQQQQQQQQQQQQQQQQQQQQQ 90
Score = 33.5 bits (75), Expect = 0.24
Identities = 39/134 (29%), Positives = 51/134 (38%), Gaps = 16/134 (11%)
Query: 152 PTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNA 211
P +Q QQQ +Q Q ++ Q QQ Q QQ +Q+ +QL
Sbjct: 9 PQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQ--------EQLHLQLLQ 60
Query: 212 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVT 271
Q Q + Q Q Q Q QQ Q + QQ QQQ Q G+Q + QQ
Sbjct: 61 QQQQQQQQQQ--------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQ 112
Query: 272 MPAGQDLAQPMFIQ 285
Q AQ + Q
Sbjct: 113 QQQQQLAAQQLVFQ 126
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
+ P + Q+ ++Q V + +Q L QQ AV +Q QQQ Q+ Q++ Q
Sbjct: 124 ITPQQMQQILQQQVLSPQQLQ---ALLQQQQAVMLQ-QQQLQEFYKKQQEQLHLQLLQQQ 179
Query: 183 PQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ 242
QQ Q Q QQ + QQ Q Q Q + Q G Q + Q Q
Sbjct: 180 QQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLA 236
Query: 243 ITQTEVQQGQQQFSQFTDGQQLYQIQQ---VTMPAGQ 276
Q QQ Q Q Q L +Q+ +++P GQ
Sbjct: 237 AQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQ 273
Score = 35.0 bits (79), Expect = 0.081
Identities = 45/151 (29%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 137 TPAEPVQYYFTLAQQPTAVQVQG--QQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQ 194
T A PV Q T Q+Q QQQ +Q Q ++ Q QQ Q QQ
Sbjct: 109 TFAVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQ 168
Query: 195 IITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQ 254
+Q+ +QL Q Q + Q Q Q Q QQ Q + QQ QQQ
Sbjct: 169 --------EQLHLQLLQQQQQQQQQQQ--------QQQQQQQQQQQQQQQQQQQQQQQQQ 212
Query: 255 FSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQ 285
Q G+Q + QQ Q AQ + Q
Sbjct: 213 QQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQ 243
Score = 31.6 bits (70), Expect = 0.90
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 12/145 (8%)
Query: 153 TAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAG 212
T + + G G +T + P + + PQ T Q MQQI+ QQ+ L+
Sbjct: 92 TKLCICGHSSGDGHPHNTFAV-PVSVAMMTPQV-ITPQQMQQILQ-----QQV---LSPQ 141
Query: 213 QLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTM 272
QLQ L Q + Q Q+Q Q+ ++ Q QQQ Q QQ Q QQ
Sbjct: 142 QLQ--ALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQ 199
Query: 273 PAGQDLAQPMFIQSANQPSDGQAPQ 297
Q Q Q Q QA +
Sbjct: 200 QQQQQQQQQQQQQQQQQHPGKQAKE 224
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 38.1 bits (87), Expect = 0.010
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 221 QPVSGTQ---VVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQD 277
QP+ T +++ Q + QQ Q + QQ QQQ Q QQ Q QQ
Sbjct: 41 QPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAA 100
Query: 278 LAQPMFIQSANQPSDGQAPQV 298
Q Q A Q + GQAPQ+
Sbjct: 101 AVQQSTSQQATQGTSGQAPQL 121
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 38.1 bits (87), Expect = 0.010
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 128 RQEEVRQSVTPAEPVQYYFTLAQQPTA-VQVQGQQQGQQTTSSTTTI---QPGQIIIAQP 183
+ ++ + + P P + QPTA VQVQ Q QQ + TT+ +PG ++
Sbjct: 2782 KMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTT 2841
Query: 184 QQGQTMQVMQQIITNTGEIQ-QIPVQLNAGQLQYIRLAQP----VSGTQVVQGQIQTLAT 238
+QV + T ++Q Q +Q A Q + LA+P V V + TL
Sbjct: 2842 V--ANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPM 2899
Query: 239 NAQQIT----QTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 294
N I+ Q + GQ +Q QQL +++Q Q + Q A QP Q
Sbjct: 2900 NVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQ----------QAVQQQKAIQPQAAQ 2949
Query: 295 AP 296
P
Sbjct: 2950 GP 2951
Score = 32.3 bits (72), Expect = 0.53
Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 26/166 (15%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIP 206
T+ QP +Q Q + QQ IQP AQ ++ Q IT G Q++
Sbjct: 2918 TVVAQPVHMQ-QLLKLKQQAVQQQKAIQPQA---AQGPAAVQQKITAQQITTPGAQQKVA 2973
Query: 207 VQLN-AGQLQY----IRLAQPVSGTQVVQGQI-----------QTLATNAQQITQTEVQQ 250
A + Q+ I AQ ++G Q VQ QI QT + QQ+ Q
Sbjct: 2974 YAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQA 3033
Query: 251 GQQ--QFSQFT-DGQQLYQIQQVTMPA---GQDLAQPMFIQSANQP 290
Q +Q T GQQ+ I VT A Q L Q + +A+ P
Sbjct: 3034 SPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAP 3079
Score = 30.0 bits (66), Expect = 2.6
Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 19/170 (11%)
Query: 135 SVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQ 194
SVT + V T Q P V Q TI P + + QQ Q Q QQ
Sbjct: 2671 SVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQ 2730
Query: 195 IITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQGQIQTLA--TNAQQITQTEVQQ 250
QQ Q Q Q + S QV +QGQ Q+ A ++T + +
Sbjct: 2731 --------QQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIK 2782
Query: 251 GQQQFSQFTDGQQLYQIQQV-TMPAGQDLAQPMFIQSANQPSDGQAPQVT 299
Q+Q Q Q Q P Q Q +QP Q+PQ+T
Sbjct: 2783 MQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQ------TSQPPQQQSPQLT 2826
Score = 28.9 bits (63), Expect = 5.8
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 18/99 (18%)
Query: 134 QSVTPAEPVQYYFTLAQQPTAVQVQ------------GQQQGQQTTSSTTTIQPGQIIIA 181
Q + A+ VQ +A+ P VQ Q QQ QT + T GQ +
Sbjct: 2993 QKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQM 3052
Query: 182 QPQQGQTMQVM------QQIITNTGEIQQIPVQLNAGQL 214
P T QV+ QQ++T Q P N Q+
Sbjct: 3053 IPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAPNPAQV 3091
>gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens]
Length = 713
Score = 37.7 bits (86), Expect = 0.013
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPV 223
QQ T+S TT GQ+ + QG +Q T IQ Q LQ QP
Sbjct: 282 QQNTNSLTT-SSGQVH-SSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPT 339
Query: 224 SGTQVVQG----QIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLA 279
S Q+VQG I + + Q I+Q +Q Q Q + G L Q Q VT P+GQ
Sbjct: 340 SQAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLN---PGTFLIQAQTVT-PSGQVTW 395
Query: 280 QPMFIQ 285
Q +Q
Sbjct: 396 QTFQVQ 401
Score = 32.0 bits (71), Expect = 0.69
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGE-IQQIPVQLNAGQ 213
V + Q Q Q +++ +Q Q+ +Q Q Q++Q I T +Q ++
Sbjct: 309 VSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQA-QIVQGITPQTIHGVQASGQNISQQA 367
Query: 214 LQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFS----QFTDGQQLYQIQQ 269
LQ ++L Q GT ++Q Q T+ + Q QT QG Q Q T QQ+
Sbjct: 368 LQNLQL-QLNPGTFLIQAQ--TVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPV 424
Query: 270 VTMPAGQDLAQPMFIQSANQPSDGQAPQV 298
T+ GQ A F + S GQ P +
Sbjct: 425 QTLTLGQVAAGGAFTSTPVSLSTGQLPNL 453
>gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens]
Length = 781
Score = 37.7 bits (86), Expect = 0.013
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPV 223
QQ T+S TT GQ+ + QG +Q T IQ Q LQ QP
Sbjct: 350 QQNTNSLTT-SSGQVH-SSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPT 407
Query: 224 SGTQVVQG----QIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLA 279
S Q+VQG I + + Q I+Q +Q Q Q + G L Q Q VT P+GQ
Sbjct: 408 SQAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLN---PGTFLIQAQTVT-PSGQVTW 463
Query: 280 QPMFIQ 285
Q +Q
Sbjct: 464 QTFQVQ 469
Score = 32.0 bits (71), Expect = 0.69
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGE-IQQIPVQLNAGQ 213
V + Q Q Q +++ +Q Q+ +Q Q Q++Q I T +Q ++
Sbjct: 377 VSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQA-QIVQGITPQTIHGVQASGQNISQQA 435
Query: 214 LQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFS----QFTDGQQLYQIQQ 269
LQ ++L Q GT ++Q Q T+ + Q QT QG Q Q T QQ+
Sbjct: 436 LQNLQL-QLNPGTFLIQAQ--TVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPV 492
Query: 270 VTMPAGQDLAQPMFIQSANQPSDGQAPQV 298
T+ GQ A F + S GQ P +
Sbjct: 493 QTLTLGQVAAGGAFTSTPVSLSTGQLPNL 521
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 37.0 bits (84), Expect = 0.021
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQ 227
S+ +IQ + P Q Q Q+ Q + +IQ + Q I+ AQ V+G
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQ-AQLVAGQS 204
Query: 228 VVQG---QIQTL-ATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMP-------AGQ 276
+ G QIQT+ A + Q ++G+++ + Q + + ++V MP +GQ
Sbjct: 205 LAGGQQIQIQTVGALSPPPSQQGSPREGERRVGTASVLQPVKK-RKVDMPITVSYAISGQ 263
Query: 277 DLAQPMFIQSANQPS 291
+A + I Q S
Sbjct: 264 PVATVLAIPQGQQQS 278
Score = 35.4 bits (80), Expect = 0.062
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 170 TTTIQPG-----QIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVS 224
TT++QP QI + QPQQ Q +QQ QQ+ QL+ + QP+
Sbjct: 81 TTSVQPQTQQEQQIQVQQPQQVQVQVQVQQ------SPQQVSAQLSPQLTVHQPTEQPIQ 134
Query: 225 GTQVVQGQ--------IQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQ 276
+QGQ IQT + + +Q + Q Q Q Q Q +I + +P Q
Sbjct: 135 VQVQIQGQAPQSAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQ 194
Query: 277 DLAQPMFIQS 286
AQ + QS
Sbjct: 195 IQAQLVAGQS 204
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 37.0 bits (84), Expect = 0.021
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQ 227
S+ +IQ + P Q Q Q+ Q + +IQ + Q I+ AQ V+G
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQ-AQLVAGQS 204
Query: 228 VVQG---QIQTL-ATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMP-------AGQ 276
+ G QIQT+ A + Q ++G+++ + Q + + ++V MP +GQ
Sbjct: 205 LAGGQQIQIQTVGALSPPPSQQGSPREGERRVGTASVLQPVKK-RKVDMPITVSYAISGQ 263
Query: 277 DLAQPMFIQSANQPS 291
+A + I Q S
Sbjct: 264 PVATVLAIPQGQQQS 278
Score = 35.4 bits (80), Expect = 0.062
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 170 TTTIQPG-----QIIIAQPQQGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVS 224
TT++QP QI + QPQQ Q +QQ QQ+ QL+ + QP+
Sbjct: 81 TTSVQPQTQQEQQIQVQQPQQVQVQVQVQQ------SPQQVSAQLSPQLTVHQPTEQPIQ 134
Query: 225 GTQVVQGQ--------IQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQ 276
+QGQ IQT + + +Q + Q Q Q Q Q +I + +P Q
Sbjct: 135 VQVQIQGQAPQSAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQ 194
Query: 277 DLAQPMFIQS 286
AQ + QS
Sbjct: 195 IQAQLVAGQS 204
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 36.6 bits (83), Expect = 0.028
Identities = 48/184 (26%), Positives = 64/184 (34%), Gaps = 16/184 (8%)
Query: 129 QEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQT 188
Q++ + V + +Q Q + Q QQQ QQ I Q+ Q QQ Q
Sbjct: 197 QQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQ 256
Query: 189 MQVMQQIITNTGEIQQIPVQ-----------LNAGQLQYIRLAQPVSGTQ---VVQGQIQ 234
Q QQ + IQQ P+Q Q+ + + QP Q V Q Q
Sbjct: 257 QQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPS 316
Query: 235 TLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 294
L +Q TQ V Q Q Q Q + + M Q QP Q Q
Sbjct: 317 QLPPQSQ--TQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQ 374
Query: 295 APQV 298
A Q+
Sbjct: 375 AAQM 378
Score = 32.7 bits (73), Expect = 0.40
Identities = 41/139 (29%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Query: 166 TTSSTTTIQPGQIIIAQPQQGQTMQVMQ-------QIITNTGEIQQIPVQLNAGQLQYIR 218
T + T +Q Q+ + Q QQ Q Q Q + QQ Q +A Q Q+
Sbjct: 146 TATPQTQLQLQQVALQQQQQ---QQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQA 202
Query: 219 LAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDL 278
+ Q Q Q Q Q L Q Q ++QQ QQQ + QL Q QQ Q
Sbjct: 203 VVQQQQQLQQQQQQQQHLIKLHHQ-NQQQIQQQQQQLQRIAQ-LQLQQQQQQQQQQQQQQ 260
Query: 279 AQPMFIQSANQPSDGQAPQ 297
Q + Q Q Q PQ
Sbjct: 261 QQALQAQPPIQQPPMQQPQ 279
Score = 28.1 bits (61), Expect = 9.9
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 12/70 (17%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFT------------LAQQPTAVQVQGQQQGQQTTSSTTT 172
PP+ Q + S A P Q +T + Q P QVQ QQ QT +
Sbjct: 319 PPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQM 378
Query: 173 IQPGQIIIAQ 182
+ PG +I +
Sbjct: 379 VAPGVQMITE 388
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,125,383
Number of Sequences: 37866
Number of extensions: 412936
Number of successful extensions: 1892
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1446
Number of HSP's gapped (non-prelim): 297
length of query: 301
length of database: 18,247,518
effective HSP length: 102
effective length of query: 199
effective length of database: 14,385,186
effective search space: 2862652014
effective search space used: 2862652014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.