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Search of human proteins with 21687041
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21687041 ribonuclease, RNase A family, 11 (non-active) [Homo
sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21687041 ribonuclease, RNase A family, 11 (non-active) [Homo ... 405 e-114
gi|67459908 ribonuclease, RNase A family, 12 (non-active) [Homo ... 45 4e-05
gi|38201686 pancreatic ribonuclease precursor [Homo sapiens] 33 0.12
gi|38201684 pancreatic ribonuclease precursor [Homo sapiens] 33 0.12
gi|4506547 pancreatic ribonuclease precursor [Homo sapiens] 33 0.12
gi|38201682 pancreatic ribonuclease precursor [Homo sapiens] 33 0.12
gi|4506557 ribonuclease, RNase A family, 4 precursor [Homo sapiens] 33 0.16
gi|37577172 ribonuclease, RNase A family, 4 precursor [Homo sapi... 33 0.16
gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 32 0.36
gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 32 0.36
gi|31563503 activity-dependent neuroprotector [Homo sapiens] 32 0.47
gi|12229217 activity-dependent neuroprotector [Homo sapiens] 32 0.47
gi|254039592 nuclear RNA export factor 5 [Homo sapiens] 31 0.61
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 30 1.0
gi|44771211 mediator complex subunit 13-like [Homo sapiens] 29 2.3
gi|5901946 endothelial cell-specific molecule 1 isoform a precur... 29 3.0
gi|197333706 leucine rich repeat containing 8 family, member D [... 28 3.9
gi|34222199 leucine rich repeat containing 8 family, member D [H... 28 3.9
gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens] 28 5.1
gi|226342957 synaptotagmin XIV isoform 3 [Homo sapiens] 28 5.1
gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens] 28 5.1
gi|144226225 synaptotagmin XIV isoform 4 [Homo sapiens] 28 5.1
gi|21450796 transmembrane protein 106A [Homo sapiens] 28 5.1
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 28 6.7
gi|116235485 delta-notch-like EGF repeat-containing transmembran... 28 6.7
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens] 27 8.8
gi|197333692 leucine rich repeat containing 8 family, member B [... 27 8.8
gi|21245134 leucine rich repeat containing 8 family, member B [H... 27 8.8
gi|61806622 epithelial mitogen [Homo sapiens] 27 8.8
gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 27 8.8
>gi|21687041 ribonuclease, RNase A family, 11 (non-active) [Homo
sapiens]
Length = 199
Score = 405 bits (1042), Expect = e-114
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 METFPLLLLSLGLVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVK 60
METFPLLLLSLGLVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVK
Sbjct: 1 METFPLLLLSLGLVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVK 60
Query: 61 NTSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNF 120
NTSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNF
Sbjct: 61 NTSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNF 120
Query: 121 IRSSTEVMRRVHRAPSCKFVQNPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKI 180
IRSSTEVMRRVHRAPSCKFVQNPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKI
Sbjct: 121 IRSSTEVMRRVHRAPSCKFVQNPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKI 180
Query: 181 LTVLTGHSLMSWLVCGSKL 199
LTVLTGHSLMSWLVCGSKL
Sbjct: 181 LTVLTGHSLMSWLVCGSKL 199
>gi|67459908 ribonuclease, RNase A family, 12 (non-active) [Homo
sapiens]
Length = 147
Score = 45.1 bits (105), Expect = 4e-05
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 73 STLLTFRSLHYNDPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVH 132
+ + T LH + P+ N CN M + R + E + +CK + FI + +
Sbjct: 22 AVMSTLEHLHVDYPQ-NDVPVPARYCNHMIIQRVIREPDHTCKKEHVFIHERPRKINGIC 80
Query: 133 RAPSCKFVQN-PGISCCES-LELENTVCQFTTGKQFPRCQYH 172
+P QN I C +S + + TVCQ G ++P C+YH
Sbjct: 81 ISPKKVACQNLSAIFCFQSETKFKMTVCQLIEGTRYPACRYH 122
>gi|38201686 pancreatic ribonuclease precursor [Homo sapiens]
Length = 156
Score = 33.5 bits (75), Expect = 0.12
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 45 EKQTIEILMNPILLVKN--TSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMT 102
EK + +L+ ++L+ S+ K+ + F+ H + SS + CN M
Sbjct: 4 EKSLVRLLLLVLILLVLGWVQPSLGKESRAKK---FQRQHMDSDSSPSSSSTY--CNQMM 58
Query: 103 VWRKVSEANGSCKWSNNFIRSSTEVMRRV--HRAPSCKFVQNPGISCCESLELENTVCQF 160
R +++ G CK N F+ ++ V +CK Q S+ + T C+
Sbjct: 59 RRRNMTQ--GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHI--TDCRL 114
Query: 161 TTGKQFPRCQYHSVTSLEKILTVLTG 186
T G ++P C Y + I+ G
Sbjct: 115 TNGSRYPNCAYRTSPKERHIIVACEG 140
>gi|38201684 pancreatic ribonuclease precursor [Homo sapiens]
Length = 156
Score = 33.5 bits (75), Expect = 0.12
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 45 EKQTIEILMNPILLVKN--TSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMT 102
EK + +L+ ++L+ S+ K+ + F+ H + SS + CN M
Sbjct: 4 EKSLVRLLLLVLILLVLGWVQPSLGKESRAKK---FQRQHMDSDSSPSSSSTY--CNQMM 58
Query: 103 VWRKVSEANGSCKWSNNFIRSSTEVMRRV--HRAPSCKFVQNPGISCCESLELENTVCQF 160
R +++ G CK N F+ ++ V +CK Q S+ + T C+
Sbjct: 59 RRRNMTQ--GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHI--TDCRL 114
Query: 161 TTGKQFPRCQYHSVTSLEKILTVLTG 186
T G ++P C Y + I+ G
Sbjct: 115 TNGSRYPNCAYRTSPKERHIIVACEG 140
>gi|4506547 pancreatic ribonuclease precursor [Homo sapiens]
Length = 156
Score = 33.5 bits (75), Expect = 0.12
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 45 EKQTIEILMNPILLVKN--TSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMT 102
EK + +L+ ++L+ S+ K+ + F+ H + SS + CN M
Sbjct: 4 EKSLVRLLLLVLILLVLGWVQPSLGKESRAKK---FQRQHMDSDSSPSSSSTY--CNQMM 58
Query: 103 VWRKVSEANGSCKWSNNFIRSSTEVMRRV--HRAPSCKFVQNPGISCCESLELENTVCQF 160
R +++ G CK N F+ ++ V +CK Q S+ + T C+
Sbjct: 59 RRRNMTQ--GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHI--TDCRL 114
Query: 161 TTGKQFPRCQYHSVTSLEKILTVLTG 186
T G ++P C Y + I+ G
Sbjct: 115 TNGSRYPNCAYRTSPKERHIIVACEG 140
>gi|38201682 pancreatic ribonuclease precursor [Homo sapiens]
Length = 156
Score = 33.5 bits (75), Expect = 0.12
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 45 EKQTIEILMNPILLVKN--TSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCNDMT 102
EK + +L+ ++L+ S+ K+ + F+ H + SS + CN M
Sbjct: 4 EKSLVRLLLLVLILLVLGWVQPSLGKESRAKK---FQRQHMDSDSSPSSSSTY--CNQMM 58
Query: 103 VWRKVSEANGSCKWSNNFIRSSTEVMRRV--HRAPSCKFVQNPGISCCESLELENTVCQF 160
R +++ G CK N F+ ++ V +CK Q S+ + T C+
Sbjct: 59 RRRNMTQ--GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHI--TDCRL 114
Query: 161 TTGKQFPRCQYHSVTSLEKILTVLTG 186
T G ++P C Y + I+ G
Sbjct: 115 TNGSRYPNCAYRTSPKERHIIVACEG 140
>gi|4506557 ribonuclease, RNase A family, 4 precursor [Homo sapiens]
Length = 147
Score = 33.1 bits (74), Expect = 0.16
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 91 SGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQNPGISCCES 150
+G CN M RK++ + CK N FI +R + + + +N ++C E
Sbjct: 46 TGGSDRYCNLMMQRRKMTLYH--CKRFNTFIHEDIWNIRSICSTTNIQ-CKNGKMNCHEG 102
Query: 151 LELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGH 187
+ ++ T C+ T + P C+Y ++ S +++ G+
Sbjct: 103 V-VKVTDCRDTGSSRAPNCRYRAIASTRRVVIACEGN 138
>gi|37577172 ribonuclease, RNase A family, 4 precursor [Homo
sapiens]
Length = 147
Score = 33.1 bits (74), Expect = 0.16
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 91 SGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQNPGISCCES 150
+G CN M RK++ + CK N FI +R + + + +N ++C E
Sbjct: 46 TGGSDRYCNLMMQRRKMTLYH--CKRFNTFIHEDIWNIRSICSTTNIQ-CKNGKMNCHEG 102
Query: 151 LELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGH 187
+ ++ T C+ T + P C+Y ++ S +++ G+
Sbjct: 103 V-VKVTDCRDTGSSRAPNCRYRAIASTRRVVIACEGN 138
>gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 32.0 bits (71), Expect = 0.36
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 27 KEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSKDDMSSTLLTFRSLHYNDP 86
+EE +EE++ D+ G + +L L +++LS++ S L+ R L +
Sbjct: 322 EEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALS-RHLLTSFV 380
Query: 87 KGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQ 141
G S G D D E++ W R S E RR HR P KF++
Sbjct: 381 SGLSDGMDSGYVEDS------EESSSEWPWR----RGSQE--RRGHRRPGQKFIR 423
>gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 32.0 bits (71), Expect = 0.36
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 27 KEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSKDDMSSTLLTFRSLHYNDP 86
+EE +EE++ D+ G + +L L +++LS++ S L+ R L +
Sbjct: 322 EEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALS-RHLLTSFV 380
Query: 87 KGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQ 141
G S G D D E++ W R S E RR HR P KF++
Sbjct: 381 SGLSDGMDSGYVEDS------EESSSEWPWR----RGSQE--RRGHRRPGQKFIR 423
>gi|31563503 activity-dependent neuroprotector [Homo sapiens]
Length = 1102
Score = 31.6 bits (70), Expect = 0.47
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 20 ESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLS-MSKDDM 71
E +K+I E+ ++ E + D + G + +TI + P L+ N S S + +DD+
Sbjct: 910 EHVLKVIPEDASESEEKLDQKEDGSKYETIHLTEEPTKLMHNASDSEVDQDDV 962
>gi|12229217 activity-dependent neuroprotector [Homo sapiens]
Length = 1102
Score = 31.6 bits (70), Expect = 0.47
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 20 ESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLS-MSKDDM 71
E +K+I E+ ++ E + D + G + +TI + P L+ N S S + +DD+
Sbjct: 910 EHVLKVIPEDASESEEKLDQKEDGSKYETIHLTEEPTKLMHNASDSEVDQDDV 962
>gi|254039592 nuclear RNA export factor 5 [Homo sapiens]
Length = 365
Score = 31.2 bits (69), Expect = 0.61
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 2 ETFPLLL------LSLGLVLAEASESTMKIIKEEFTDEE----------MQYDMAKSGQE 45
+ FP LL LS +++ S TMK KE FT E Q ++ K ++
Sbjct: 237 DCFPKLLRLDGRELSAPVIVDIDSSETMKPCKENFTGSETLKHLVLQFLQQSNLCKYFKD 296
Query: 46 KQTIEILMNPIL---LVKNTSLSMSKDDMSS 73
+ I+IL +P L L+K+T + D +S+
Sbjct: 297 SRNIKILKDPYLQRKLLKHTKCPRNVDSLSA 327
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 30.4 bits (67), Expect = 1.0
Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 10/157 (6%)
Query: 28 EEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSKD---DMSSTLLTFRSLHYN 84
E + EE+Q DM K E T+E L +K + + KD +M L
Sbjct: 488 EVYLHEELQQDMQKFKNEVNTLE---EEFLALKKEDVQLHKDVEEEMEKHRSNSTELSGT 544
Query: 85 DPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQNPG 144
G + GND + N ++ E + ++N EV +++ P
Sbjct: 545 LTDGTTVGNDDDGLNQQIPRKENGEHDRPADKTSN---EKNEVKNQIYPEADFADSMEPS 601
Query: 145 ISCCESLELENTVCQ-FTTGKQFPRCQYHSVTSLEKI 180
E EL ++V + F + R +Y SL +I
Sbjct: 602 EIASEDCELSHSVYENFMLLIEQLRMEYKDSASLPRI 638
>gi|44771211 mediator complex subunit 13-like [Homo sapiens]
Length = 2210
Score = 29.3 bits (64), Expect = 2.3
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 13 LVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSKDDMS 72
+V+ +E+ ++ K F D Y+M + GQ K ++L + I+ V T D++
Sbjct: 1421 IVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELV 1480
Query: 73 S 73
S
Sbjct: 1481 S 1481
>gi|5901946 endothelial cell-specific molecule 1 isoform a precursor
[Homo sapiens]
Length = 184
Score = 28.9 bits (63), Expect = 3.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 144 GISCCESLELENTVCQFTTGK--QFPRCQYHSVTSLEKILTVLTGHSLMS 191
G+ C E+ ++ +C TGK +FP QY SVT LT H + S
Sbjct: 108 GMDCRETCNCQSGICDRGTGKCLKFPFFQY-SVTKSSNRFVSLTEHDMAS 156
>gi|197333706 leucine rich repeat containing 8 family, member D
[Homo sapiens]
Length = 858
Score = 28.5 bits (62), Expect = 3.9
Identities = 13/44 (29%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 12 GLVLAEASESTMKIIK--EEFTDEEMQYDMAKSGQEKQTIEILM 53
G+ L+E SE+ ++ I E+T E+++ ++++ Q+KQ + + M
Sbjct: 435 GVFLSEVSENKLREISLNHEWTFEKLRQHISRNAQDKQELHLFM 478
>gi|34222199 leucine rich repeat containing 8 family, member D [Homo
sapiens]
Length = 858
Score = 28.5 bits (62), Expect = 3.9
Identities = 13/44 (29%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 12 GLVLAEASESTMKIIK--EEFTDEEMQYDMAKSGQEKQTIEILM 53
G+ L+E SE+ ++ I E+T E+++ ++++ Q+KQ + + M
Sbjct: 435 GVFLSEVSENKLREISLNHEWTFEKLRQHISRNAQDKQELHLFM 478
>gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens]
Length = 600
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 142 NPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGHSLMSW 192
+P +SC S E+ ++ C+F+ PRC Y+ S TGH + S+
Sbjct: 219 SPHLSCTPS-EIGDSKCEFSHCSNSPRCSYNKCPSEGS-----TGHEIESF 263
>gi|226342957 synaptotagmin XIV isoform 3 [Homo sapiens]
Length = 574
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 142 NPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGHSLMSW 192
+P +SC S E+ ++ C+F+ PRC Y+ S TGH + S+
Sbjct: 174 SPHLSCTPS-EIGDSKCEFSHCSNSPRCSYNKCPSEGS-----TGHEIESF 218
>gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens]
Length = 619
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 142 NPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGHSLMSW 192
+P +SC S E+ ++ C+F+ PRC Y+ S TGH + S+
Sbjct: 219 SPHLSCTPS-EIGDSKCEFSHCSNSPRCSYNKCPSEGS-----TGHEIESF 263
>gi|144226225 synaptotagmin XIV isoform 4 [Homo sapiens]
Length = 555
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 142 NPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGHSLMSW 192
+P +SC S E+ ++ C+F+ PRC Y+ S TGH + S+
Sbjct: 174 SPHLSCTPS-EIGDSKCEFSHCSNSPRCSYNKCPSEGS-----TGHEIESF 218
>gi|21450796 transmembrane protein 106A [Homo sapiens]
Length = 262
Score = 28.1 bits (61), Expect = 5.1
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 6 LLLLSLGLVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQT------IEILMNPILLV 59
L +L L LV+ + S + + I E+M Y +A +++ T +EI ++ +LL
Sbjct: 163 LEVLHLSLVVGQVSNNLLLHIGP-LASEQMFYAVATKIRDENTYKICTWLEIKVHHVLLH 221
Query: 60 KNTSLSMSKDDMSSTLLTFRSLHYNDPKGNSS 91
+L+ S S L+ F+S Y D +GN+S
Sbjct: 222 IQGTLTCSYLSHSEQLV-FQSYEYVDCRGNAS 252
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 46 KQTIEILMNPILLVKNTSLSMSKDDMSSTLLTFRSLHYNDPKGNSSGNDKECCND 100
K+ +++L + + + N S KD+ ++T +F H +P+ + +++C D
Sbjct: 1711 KECLDVLSSSGVFLNNAS-GREKDECTATPSSFNKCHCGEPEHEETPENRKCAID 1764
>gi|116235485 delta-notch-like EGF repeat-containing transmembrane
[Homo sapiens]
Length = 737
Score = 27.7 bits (60), Expect = 6.7
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 88 GNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQNPGISC 147
G S ND EC K SEA SC ++ + E R P QN SC
Sbjct: 310 GESHANDLECSGKGKCTTKPSEATFSCTCEEQYVGTFCEEYDACQRKP----CQN-NASC 364
Query: 148 CESLELE---NTVCQFTTGKQFPRCQ 170
++ E + N C G CQ
Sbjct: 365 IDANEKQDGSNFTCVCLPGYTGELCQ 390
>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
Length = 1171
Score = 27.3 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 98 CNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCK 138
C TV VSEA S + N + + ++ RVHR+P K
Sbjct: 827 CFSHTVNLIVSEAIKSQRMVQNLLSLARKICERVHRSPKAK 867
>gi|197333692 leucine rich repeat containing 8 family, member B
[Homo sapiens]
Length = 803
Score = 27.3 bits (59), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 5 PLLLLSLGLVLAEASESTMKIIK--EEFTDEEMQYDMAKSGQEKQTIEILM 53
PL + L+E SE+ +K I E+T E+++ + K+ Q+K + + M
Sbjct: 378 PLYSKRFSIFLSEVSENKLKQINLNNEWTVEKLKSKLVKNAQDKIELHLFM 428
>gi|21245134 leucine rich repeat containing 8 family, member B [Homo
sapiens]
Length = 803
Score = 27.3 bits (59), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 5 PLLLLSLGLVLAEASESTMKIIK--EEFTDEEMQYDMAKSGQEKQTIEILM 53
PL + L+E SE+ +K I E+T E+++ + K+ Q+K + + M
Sbjct: 378 PLYSKRFSIFLSEVSENKLKQINLNNEWTVEKLKSKLVKNAQDKIELHLFM 428
>gi|61806622 epithelial mitogen [Homo sapiens]
Length = 133
Score = 27.3 bits (59), Expect = 8.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 146 SCCESLELENTVCQFTTGKQFPRCQY-----HSVTSLEKILTVLTGHSLM 190
+C ELE +C+ TG RC++ ++V S EK + + G L+
Sbjct: 63 ACAFHHELEKAICRCFTGYTGERCEHLTLTSYAVDSYEKYIAIGIGVGLL 112
>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
Length = 725
Score = 27.3 bits (59), Expect = 8.8
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 10/157 (6%)
Query: 28 EEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSK---DDMSSTLLTFRSLHYN 84
E + EE+Q DM K E T+E L +K ++ + K ++M L
Sbjct: 488 EVYLHEELQQDMQKFKNEVNTLE---EEFLALKKENVQLHKEVEEEMEKHRSNSTELSGT 544
Query: 85 DPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFVQNPG 144
G + GND + N + RK +E + + ++ +V +++ P
Sbjct: 545 LTDGTTVGNDDDGLNQQ-IPRKENEEHD--RPADKTANEKNKVKNQIYPEADFADSMEPS 601
Query: 145 ISCCESLELENTVCQ-FTTGKQFPRCQYHSVTSLEKI 180
E EL ++V + F + R +Y SL +I
Sbjct: 602 EIASEDCELSHSVYENFMLLIEQLRMEYKDSASLPRI 638
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,136,931
Number of Sequences: 37866
Number of extensions: 285603
Number of successful extensions: 758
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 31
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.