Guide to the Human Genome
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Name: RNASE11 Sequence: fasta or formatted (199aa) NCBI GI: 21687041
Description:

ribonuclease, RNase A family, 11 (non-active)

Referenced in:

RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5          5           1
 C cysteine            4.5          9           2
 D aspartate           3.5          7           2
 E glutamate           8.0         16           2
 F phenylalanine       3.5          7           1
 G glycine             4.5          9           1
 H histidine           2.0          4           1
 I isoleucine          4.0          8           2
 K lysine              7.0         14           1
 L leucine            11.1         22           4
 M methionine          5.0         10           1
 N asparagine          5.5         11           2
 P proline             3.0          6           1
 Q glutamine           3.5          7           1
 R arginine            3.5          7           2
 S serine             12.6         25           2
 T threonine           7.5         15           2
 V valine              5.5         11           1
 W tryptophan          1.5          3           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, 11 (non-active) 
RNASE12               0.053   ribonuclease, RNase A family, 12 (non-active) 
RNASE1                0.021   pancreatic ribonuclease precursor 
RNASE1                0.021   pancreatic ribonuclease precursor 
RNASE1                0.021   pancreatic ribonuclease precursor 
RNASE1                0.021   pancreatic ribonuclease precursor 
RNASE4                0.021   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.021   ribonuclease, RNase A family, 4 precursor 
PIK3R5                0.018   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
PIK3R5                0.018   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
ADNP                  0.018   activity-dependent neuroprotector 
ADNP                  0.018   activity-dependent neuroprotector 
NXF5                  0.016   nuclear RNA export factor 5 
CCDC144A              0.013   coiled-coil domain containing 144A 
MED13L                0.011   mediator complex subunit 13-like 
ESM1                  0.011   endothelial cell-specific molecule 1 isoform a precur...
LRRC8D                0.008   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.008   leucine rich repeat containing 8 family, member D [H...
SYT14                 0.008   synaptotagmin XIV isoform 2 
SYT14                 0.008   synaptotagmin XIV isoform 3 
SYT14                 0.008   synaptotagmin XIV isoform 1 
SYT14                 0.008   synaptotagmin XIV isoform 4 
TMEM106A              0.008   transmembrane protein 106A 
DST                   0.008   dystonin isoform 1eB precursor 
DNER                  0.008   delta-notch-like EGF repeat-containing transmembran...
ZBED4                 0.005   zinc finger, BED-type containing 4 
LRRC8B                0.005   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.005   leucine rich repeat containing 8 family, member B [H...
EPGN                  0.005   epithelial mitogen 
CCDC144B              0.005   coiled-coil domain containing 144B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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