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Search of human proteins with 21389523
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389523 leucine zipper-EF-hand containing transmembrane
protein 2 [Homo sapiens]
(396 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389523 leucine zipper-EF-hand containing transmembrane prot... 782 0.0
gi|6912482 leucine zipper-EF-hand containing transmembrane prote... 276 3e-74
gi|67089167 LETM1 domain containing 1 isoform 2 [Homo sapiens] 51 2e-06
gi|67089165 LETM1 domain containing 1 isoform 1 [Homo sapiens] 51 2e-06
gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Hom... 35 0.091
gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo ... 35 0.091
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 35 0.12
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 35 0.12
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 35 0.12
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 33 0.45
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 33 0.45
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 33 0.45
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 33 0.45
gi|32129199 cytokine induced protein 29 kDa [Homo sapiens] 33 0.45
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 33 0.45
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 33 0.59
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 33 0.59
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 33 0.59
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 33 0.59
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 33 0.59
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 33 0.59
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 33 0.59
gi|166064029 angiomotin isoform 1 [Homo sapiens] 33 0.59
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 32 0.77
gi|161702986 ezrin [Homo sapiens] 32 1.0
gi|21614499 ezrin [Homo sapiens] 32 1.0
gi|21735548 centrosomal protein 2 [Homo sapiens] 32 1.0
gi|94681049 hypothetical protein LOC80217 [Homo sapiens] 32 1.0
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 32 1.3
gi|41349446 stromal interaction molecule 2 [Homo sapiens] 32 1.3
>gi|21389523 leucine zipper-EF-hand containing transmembrane protein
2 [Homo sapiens]
Length = 396
Score = 782 bits (2020), Expect = 0.0
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MKNYESKKYSDPSQPGNTVLHPGTRLIQKLHTSTCWLQEVPGKPQLEQATKHPQVTSPQA 60
MKNYESKKYSDPSQPGNTVLHPGTRLIQKLHTSTCWLQEVPGKPQLEQATKHPQVTSPQA
Sbjct: 1 MKNYESKKYSDPSQPGNTVLHPGTRLIQKLHTSTCWLQEVPGKPQLEQATKHPQVTSPQA 60
Query: 61 TKETGMEIKEGKQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRERRR 120
TKETGMEIKEGKQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRERRR
Sbjct: 61 TKETGMEIKEGKQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRERRR 120
Query: 121 EEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEIVR 180
EEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEIVR
Sbjct: 121 EEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEIVR 180
Query: 181 FSKLFEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGV 240
FSKLFEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGV
Sbjct: 181 FSKLFEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGV 240
Query: 241 TALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTFYLIDVK 300
TALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTFYLIDVK
Sbjct: 241 TALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTFYLIDVK 300
Query: 301 PKPIEIPLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTSSPITPS 360
PKPIEIPLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTSSPITPS
Sbjct: 301 PKPIEIPLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTSSPITPS 360
Query: 361 TPISLPKGPITSSEEPTLQAKSQMTAQNSKASSKGA 396
TPISLPKGPITSSEEPTLQAKSQMTAQNSKASSKGA
Sbjct: 361 TPISLPKGPITSSEEPTLQAKSQMTAQNSKASSKGA 396
>gi|6912482 leucine zipper-EF-hand containing transmembrane protein
1 [Homo sapiens]
Length = 739
Score = 276 bits (705), Expect = 3e-74
Identities = 145/276 (52%), Positives = 191/276 (69%), Gaps = 49/276 (17%)
Query: 72 KQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRERR------------ 119
K+S Q+++DELK+YY+GF LLWID K+AARM+WR+L+G LTRRERR
Sbjct: 150 KKSLGQRVLDELKHYYHGFRLLWIDTKIAARMLWRILNGHSLTRRERRQFLRICADLFRL 209
Query: 120 ------------------------------------REEKQKKKMAVKLELAKFLQETMT 143
+EE+ KK++ VKLELAKFLQ+T+
Sbjct: 210 VPFLVFVVVPFMEFLLPVAVKLFPNMLPSTFETQSLKEERLKKELRVKLELAKFLQDTIE 269
Query: 144 EMARRNRAKMGDASTQLSSYVKQV-QTGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVAL 202
EMA +N+A G A+ S + +++ +TG +PS +EI+RFSKLFED+L L++L RPQLVAL
Sbjct: 270 EMALKNKAAKGSATKDFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVAL 329
Query: 203 CKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGL 262
CKLLELQ+ GTNN LRFQL M+L+SIKADD++IA+EGV +L+V ELQAACRARGMR+LG+
Sbjct: 330 CKLLELQSIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGV 389
Query: 263 TEEQLRQQLTEWQDLHLKENVPPSLLLLSRTFYLID 298
TE++LR QL +W DLHL + +P SLL+LSR YL D
Sbjct: 390 TEDRLRGQLKQWLDLHLHQEIPTSLLILSRAMYLPD 425
>gi|67089167 LETM1 domain containing 1 isoform 2 [Homo sapiens]
Length = 304
Score = 51.2 bits (121), Expect = 2e-06
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 159 QLSSYVKQVQTGHKPSTKEIVRFSKLFEDQ-LALEHLDRPQLVALCKLLELQTFGTNNLL 217
+L+ ++Q G P+ +I+ + F + L + L + AL + + L ++ LL
Sbjct: 157 RLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLL 216
Query: 218 RFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEW 274
R +L I D+ +AK G+ L+ E+++AC RG+ S + E++ R L EW
Sbjct: 217 RHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEW 273
>gi|67089165 LETM1 domain containing 1 isoform 1 [Homo sapiens]
Length = 360
Score = 51.2 bits (121), Expect = 2e-06
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 159 QLSSYVKQVQTGHKPSTKEIVRFSKLFEDQ-LALEHLDRPQLVALCKLLELQTFGTNNLL 217
+L+ ++Q G P+ +I+ + F + L + L + AL + + L ++ LL
Sbjct: 213 RLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLL 272
Query: 218 RFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEW 274
R +L I D+ +AK G+ L+ E+++AC RG+ S + E++ R L EW
Sbjct: 273 RHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEW 329
>gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Homo
sapiens]
Length = 1134
Score = 35.4 bits (80), Expect = 0.091
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 297 IDVKPKPIEIPLSGEA--PKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTS 354
+ KPK I +P G+ P +DI + S + + + P + GTK + Q P V
Sbjct: 508 VPTKPKQINLPYFGQTNQPPSDIKPD-----GSSQQLSTVVPSM-GTKPKPAGQQPRVLL 561
Query: 355 SPITPSTPISLPKGPITSSEEPTLQAKSQMTAQNSK 390
SP PS P + E P A T Q SK
Sbjct: 562 SPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSK 597
>gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo
sapiens]
Length = 1005
Score = 35.4 bits (80), Expect = 0.091
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 297 IDVKPKPIEIPLSGEA--PKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTS 354
+ KPK I +P G+ P +DI + S + + + P + GTK + Q P V
Sbjct: 379 VPTKPKQINLPYFGQTNQPPSDIKPD-----GSSQQLSTVVPSM-GTKPKPAGQQPRVLL 432
Query: 355 SPITPSTPISLPKGPITSSEEPTLQAKSQMTAQNSK 390
SP PS P + E P A T Q SK
Sbjct: 433 SPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSK 468
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 35.0 bits (79), Expect = 0.12
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 280 KENVPPSLLLLSRTFYLIDVKPKPIEI--PLSGEAPKTDILVELP----------TFTES 327
KE PP L LLS L ++ E L + +LV P T ES
Sbjct: 3837 KEERPPELPLLSEQLSLDELWDMLGECLKELEESHDQHAVLVLQPAVEAFFLVHATERES 3896
Query: 328 KENMVDLAP-QLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKSQMTA 386
K + D QL KDE PPP++ +P+TP+TP SL P S E ++ S +
Sbjct: 3897 KPPVRDTRESQLAHIKDE----PPPLSPAPLTPATPSSL--DPFFSREPSSMHISSSLPP 3950
Query: 387 QNSK 390
K
Sbjct: 3951 DTQK 3954
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 35.0 bits (79), Expect = 0.12
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 109 HGQVLTRRERRREEKQKKKMAVKLELA-----KFLQETMTEMARRNRAKMGDA-STQLSS 162
HG +T ER EKQ K + L K LQE+ T + K+ + +
Sbjct: 1176 HGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKLDKVIAGTIDQ 1235
Query: 163 YVKQVQTGHKPSTKEIVRFS---KLFEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRF 219
+V + + + ++ + +L E QL + L P+L K +L+ ++ L+
Sbjct: 1236 TTGEVLSVFQAVLRGLIDYDTGIRLLETQLMISGLISPELR---KCFDLKDAKSHGLIDE 1292
Query: 220 QLLMKLKSIKADDEIIAKEGVTALSVSELQA 250
Q+L +LK + EII+ T + V + A
Sbjct: 1293 QILCQLKELSKAKEIISAASPTTIPVLDALA 1323
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.0 bits (79), Expect = 0.12
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 43/203 (21%)
Query: 111 QVLTRRERRREEKQKKKMAVKLELAKFLQETM-TEMARRN-RAKMGD------------- 155
Q+ T+ E RE+K+K + A EL K L TE ARR +A+M +
Sbjct: 393 QMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEER 452
Query: 156 -ASTQLSSYVKQ--VQTGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLELQTFG 212
+ Q S VKQ V K S ++I + KL E +LA + + L K L+ +
Sbjct: 453 ISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQE------LTKKLQTRE-- 504
Query: 213 TNNLLRFQLLMKLKSIKADDEII----AKEGVTALSVSELQAACRA------RGMRSLGL 262
FQ MK+ K+ E + KE +L++ EL+ +A +R L
Sbjct: 505 ----REFQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQ 560
Query: 263 TEEQLRQQLTEWQ---DLHLKEN 282
E R ++ E + + L+EN
Sbjct: 561 EAETYRTRILELESSLEKSLQEN 583
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 33.1 bits (74), Expect = 0.45
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 117 ERRREEKQKKKMAVKL-----ELAKFLQETMTEMAR--RNRAKMGDASTQLSSYVKQVQT 169
ERRREE++++K L E AK+ +E R NR +M + + +L + +
Sbjct: 819 ERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARL----RHEEE 874
Query: 170 GHKPSTKEIVRFSKLF----EDQLALEHL---DRPQLVALCKLLELQTFG---TNNLLRF 219
K E+ R +L + Q AL L + Q +A KL T+G +
Sbjct: 875 ERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 934
Query: 220 QLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHL 279
Q + L I+ +E ++ + E Q + M++L ++Q +Q+L+ W ++
Sbjct: 935 QATLSLAEIQKLEEERERQ------LREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSK 988
Query: 280 KENVPPSLL 288
SLL
Sbjct: 989 PSGTTKSLL 997
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
Length = 1320
Score = 33.1 bits (74), Expect = 0.45
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 117 ERRREEKQKKKMAVKL-----ELAKFLQETMTEMAR--RNRAKMGDASTQLSSYVKQVQT 169
ERRREE++++K L E AK+ +E R NR +M + + +L + +
Sbjct: 846 ERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARL----RHEEE 901
Query: 170 GHKPSTKEIVRFSKLF----EDQLALEHL---DRPQLVALCKLLELQTFG---TNNLLRF 219
K E+ R +L + Q AL L + Q +A KL T+G +
Sbjct: 902 ERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 961
Query: 220 QLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHL 279
Q + L I+ +E ++ + E Q + M++L ++Q +Q+L+ W ++
Sbjct: 962 QATLSLAEIQKLEEERERQ------LREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSK 1015
Query: 280 KENVPPSLL 288
SLL
Sbjct: 1016 PSGTTKSLL 1024
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 33.1 bits (74), Expect = 0.45
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 117 ERRREEKQKKKMAVKL-----ELAKFLQETMTEMAR--RNRAKMGDASTQLSSYVKQVQT 169
ERRREE++++K L E AK+ +E R NR +M + + +L + +
Sbjct: 825 ERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARL----RHEEE 880
Query: 170 GHKPSTKEIVRFSKLF----EDQLALEHL---DRPQLVALCKLLELQTFG---TNNLLRF 219
K E+ R +L + Q AL L + Q +A KL T+G +
Sbjct: 881 ERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 940
Query: 220 QLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHL 279
Q + L I+ +E ++ + E Q + M++L ++Q +Q+L+ W ++
Sbjct: 941 QATLSLAEIQKLEEERERQ------LREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSK 994
Query: 280 KENVPPSLL 288
SLL
Sbjct: 995 PSGTTKSLL 1003
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 33.1 bits (74), Expect = 0.45
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 117 ERRREEKQKKKMAVKL-----ELAKFLQETMTEMAR--RNRAKMGDASTQLSSYVKQVQT 169
ERRREE++++K L E AK+ +E R NR +M + + +L + +
Sbjct: 825 ERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARL----RHEEE 880
Query: 170 GHKPSTKEIVRFSKLF----EDQLALEHL---DRPQLVALCKLLELQTFG---TNNLLRF 219
K E+ R +L + Q AL L + Q +A KL T+G +
Sbjct: 881 ERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 940
Query: 220 QLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHL 279
Q + L I+ +E ++ + E Q + M++L ++Q +Q+L+ W ++
Sbjct: 941 QATLSLAEIQKLEEERERQ------LREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSK 994
Query: 280 KENVPPSLL 288
SLL
Sbjct: 995 PSGTTKSLL 1003
>gi|32129199 cytokine induced protein 29 kDa [Homo sapiens]
Length = 210
Score = 33.1 bits (74), Expect = 0.45
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 243 LSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTFYLIDVKPK 302
L ++EL+ C ARG+ + G+ ++ L +L + + H +E +L T + + K
Sbjct: 11 LKLAELKQECLARGLETKGI-KQDLIHRLQAYLEEHAEEEANEEDVLGDET---EEEETK 66
Query: 303 PIEIPLSGEAP 313
PIE+P+ E P
Sbjct: 67 PIELPVKEEEP 77
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 33.1 bits (74), Expect = 0.45
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 107 LLHGQVLT----RRERRREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSS 162
L H Q L +R+R RE KKK+A L LQ+T+ ++ +R + ++ ++L
Sbjct: 677 LAHMQALAEEWKKRDRERESLVKKKVAEYTILEGKLQKTLIDLEKREQ-QLASVESELQR 735
Query: 163 YVKQVQTGHKPSTKEI---VRFSKLFED---QLALEHLDRPQL 199
K++Q+ + + +E+ +R +K ED Q+ LE L QL
Sbjct: 736 EKKELQSERQRNLQELQDSIRRAK--EDCIHQVELERLKIKQL 776
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 32.7 bits (73), Expect = 0.59
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 336 PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
P + T + I P P S P+ P TP P P+ S++ P + S
Sbjct: 2204 PVVPVTPADSPIVPVPPASDPVVPVTPADTPGSPVASADGPVVPVTS 2250
Score = 32.3 bits (72), Expect = 0.77
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 335 APQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
+P + T +D I P SP+ P TP +P P+T + P + S
Sbjct: 1494 SPFIPVTTADDPIVPVTPADSPVVPVTPADIPVVPVTPANGPVIHVTS 1541
Score = 32.3 bits (72), Expect = 0.77
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 315 TDILVELPTFTESKENMVDLA--PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITS 372
TD+LV L + T+ + DLA P + T + + P T SP+ P P P P+TS
Sbjct: 2361 TDVLVVLVSPTDGIP-VPDLADDPVVSVTTSDSPVIPVTPTDSPVVPVAPADGPVVPVTS 2419
Query: 373 SEEPTL 378
+ P +
Sbjct: 2420 VDSPVV 2425
Score = 32.0 bits (71), Expect = 1.0
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 315 TDILVELPTFTESKENMVDLA--PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITS 372
TD+LV +P F + D A P + T +D + P SP+ P T P PIT
Sbjct: 65 TDVLV-VPVFPADGILVPDFADNPVVPVTPADDLVFPVTPADSPVIPVTSADDPVVPITP 123
Query: 373 SEEPTLQAKS 382
++ P + S
Sbjct: 124 ADNPVVPVTS 133
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 335 APQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
+P + T + + P PI P TP P P+TS++ P + S
Sbjct: 425 SPLIPVTTADGRVVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTS 472
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 336 PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
P + T + I P PI P TP P P+TS++ P + S
Sbjct: 686 PVIPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTS 732
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 335 APQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEP 376
+P L T E P SPI P TP + P P+TS++ P
Sbjct: 535 SPVLSVTPAESPAIPVTPADSPIVPVTPANGPVVPVTSADSP 576
Score = 30.4 bits (67), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 347 IQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
I P PI P TP P P+TS++ P + S
Sbjct: 1038 IVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTS 1073
Score = 30.4 bits (67), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 347 IQPPPVTSSPITPSTPISLPKGPITSSEEPTL 378
+ P T PI P TP P P+TS++ P +
Sbjct: 1396 VVPVTPTGDPIVPVTPADTPGSPVTSADGPVV 1427
Score = 30.0 bits (66), Expect = 3.8
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 16/72 (22%)
Query: 321 LPTFTESKENMVDL----APQLKGTKDEDFIQP--------PPVTSS--PITPSTPISLP 366
+P F + E +V L +P + T +D + P PVTS+ P+ P TP P
Sbjct: 880 VPAFAD--ETVVPLNPADSPVIPVTPPDDLVVPVTPTDCPVAPVTSADCPVVPVTPADSP 937
Query: 367 KGPITSSEEPTL 378
P+T+++ P +
Sbjct: 938 ADPVTAADGPVV 949
Score = 30.0 bits (66), Expect = 3.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 336 PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTL 378
P + T + + P P+ P TP P P+T++++PT+
Sbjct: 1756 PVVPVTSADGPVAPVSSADGPVVPVTPADSPVVPVTTADDPTV 1798
Score = 30.0 bits (66), Expect = 3.8
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 303 PIEIPLSGEAPKTDILVEL-PTFTESKENMVDLAPQLKGTKDEDFIQPPPVTSSPITPST 361
P + P+ P +D +V + P T P + T + + P SP+ P T
Sbjct: 2210 PADSPIVPVPPASDPVVPVTPADTPGSPVASADGPVVPVTSADSPLVPVTPGDSPVVPVT 2269
Query: 362 PISLPKGPITSSEEP 376
P P P+TS++ P
Sbjct: 2270 PADSPVFPVTSADGP 2284
Score = 29.3 bits (64), Expect = 6.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 351 PVTS--SPITPSTPISLPKGPITSSEEP 376
PVTS SP+ P TP P P+TS++ P
Sbjct: 1308 PVTSADSPVVPVTPADGPVVPVTSADSP 1335
Score = 29.3 bits (64), Expect = 6.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 347 IQPPPVTSSPITPSTPISLPKGPITSSEEPTL 378
+ P P T P+ P + P P+T ++ PT+
Sbjct: 3255 VVPDPTTDGPVAPDPSVDGPVVPVTPADAPTV 3286
Score = 28.9 bits (63), Expect = 8.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 344 EDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTL 378
+D + + SP+ P TP P P+TS++ P +
Sbjct: 1234 DDPVVSVTIADSPVIPVTPADSPVVPVTSADSPVV 1268
Score = 28.9 bits (63), Expect = 8.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 336 PQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKS 382
P + T +D I P SPI TP P P+T ++ P + S
Sbjct: 1925 PVVPVTPADDPIVPVTSADSPIVSVTPADSPVFPVTPADSPVIPVAS 1971
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 32.7 bits (73), Expect = 0.59
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 29/194 (14%)
Query: 117 ERRREEKQKK-----KMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSY---VKQVQ 168
+R EE Q K V +E K +++ TE ++ AS Q+ Y + Q++
Sbjct: 113 QRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLE 172
Query: 169 TGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLE--------------------L 208
K EI+ + E+ + + L C+LLE +
Sbjct: 173 ENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEM 232
Query: 209 QTFGTNNLLRFQLLMKLKSIKAD-DEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQL 267
Q +L Q KL+ + D ++ +E + S+ + + + ++ L EE+L
Sbjct: 233 QNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEEL 292
Query: 268 RQQLTEWQDLHLKE 281
+Q L E L KE
Sbjct: 293 KQTLDELDKLQQKE 306
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 32.7 bits (73), Expect = 0.59
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 29/194 (14%)
Query: 117 ERRREEKQKK-----KMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSY---VKQVQ 168
+R EE Q K V +E K +++ TE ++ AS Q+ Y + Q++
Sbjct: 200 QRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLE 259
Query: 169 TGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLE--------------------L 208
K EI+ + E+ + + L C+LLE +
Sbjct: 260 ENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEM 319
Query: 209 QTFGTNNLLRFQLLMKLKSIKAD-DEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQL 267
Q +L Q KL+ + D ++ +E + S+ + + + ++ L EE+L
Sbjct: 320 QNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEEL 379
Query: 268 RQQLTEWQDLHLKE 281
+Q L E L KE
Sbjct: 380 KQTLDELDKLQQKE 393
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 32.7 bits (73), Expect = 0.59
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 29/194 (14%)
Query: 117 ERRREEKQKK-----KMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSY---VKQVQ 168
+R EE Q K V +E K +++ TE ++ AS Q+ Y + Q++
Sbjct: 184 QRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLE 243
Query: 169 TGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLE--------------------L 208
K EI+ + E+ + + L C+LLE +
Sbjct: 244 ENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEM 303
Query: 209 QTFGTNNLLRFQLLMKLKSIKAD-DEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQL 267
Q +L Q KL+ + D ++ +E + S+ + + + ++ L EE+L
Sbjct: 304 QNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEEL 363
Query: 268 RQQLTEWQDLHLKE 281
+Q L E L KE
Sbjct: 364 KQTLDELDKLQQKE 377
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 32.7 bits (73), Expect = 0.59
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 29/194 (14%)
Query: 117 ERRREEKQKK-----KMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSY---VKQVQ 168
+R EE Q K V +E K +++ TE ++ AS Q+ Y + Q++
Sbjct: 199 QRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLE 258
Query: 169 TGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLE--------------------L 208
K EI+ + E+ + + L C+LLE +
Sbjct: 259 ENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEM 318
Query: 209 QTFGTNNLLRFQLLMKLKSIKAD-DEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQL 267
Q +L Q KL+ + D ++ +E + S+ + + + ++ L EE+L
Sbjct: 319 QNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEEL 378
Query: 268 RQQLTEWQDLHLKE 281
+Q L E L KE
Sbjct: 379 KQTLDELDKLQQKE 392
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 32.7 bits (73), Expect = 0.59
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 288 LLLSRTFYLIDVKPKPIEI--PLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDED 345
LL R D +P+P++ L+G K+ LV S + +D P + G + +
Sbjct: 2008 LLPERPLERTDSRPQPLDKVRDLAGSGTKSQSLV-------SSQRPLDRPPAVAGPRPQL 2060
Query: 346 FIQPPPVTS---SPITPSTPISLPKGPITSSEEPTLQAKSQMTAQNSKAS 392
+P PVTS SP S P+ P G + ++ A S K S
Sbjct: 2061 SDKPSPVTSPSSSPSVRSQPLERPLGTADPRLDKSIGAASPRPQSLEKTS 2110
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 32.7 bits (73), Expect = 0.59
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 288 LLLSRTFYLIDVKPKPIEI--PLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDED 345
LL R D +P+P++ L+G K+ LV S + +D P + G + +
Sbjct: 2277 LLPERPLERTDSRPQPLDKVRDLAGSGTKSQSLV-------SSQRPLDRPPAVAGPRPQL 2329
Query: 346 FIQPPPVTS---SPITPSTPISLPKGPITSSEEPTLQAKSQMTAQNSKAS 392
+P PVTS SP S P+ P G + ++ A S K S
Sbjct: 2330 SDKPSPVTSPSSSPSVRSQPLERPLGTADPRLDKSIGAASPRPQSLEKTS 2379
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 32.7 bits (73), Expect = 0.59
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 350 PPVTSSPITPSTPISLPKGPITSSE 374
PPVTS+P++P P L K P +SSE
Sbjct: 192 PPVTSAPLSPPQPNDLYKNPTSSSE 216
Score = 29.3 bits (64), Expect = 6.5
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 119 RREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEI 178
+ +E Q++K ++ ELA T +R ++ D + LS+ +V + K+
Sbjct: 543 KNKESQREKEKLEAELAT---ARSTNEDQRRHIEIRDQA--LSNAQAKVVKLEEELKKKQ 597
Query: 179 VRFSKLFEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKE 238
V K+ + Q AL QL A C+ E + LR +L +L+S++ +
Sbjct: 598 VYVDKVEKMQQALV-----QLQAACEKREQ----LEHRLRTRLERELESLRIQQR---QG 645
Query: 239 GVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENV 283
+VSE AA +R L +T+W+ +L+ENV
Sbjct: 646 NCQPTNVSEYNAAALMELLREKEERILALEADMTKWEQKYLEENV 690
>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
Length = 636
Score = 32.3 bits (72), Expect = 0.77
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 59 QATKETGMEIKEGKQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRER 118
+ K+ + KQ Y QKI + + K+A L QV T E
Sbjct: 315 EVNKQWDQHFRSMKQQYEQKITE-------------LRQKLAD------LQKQV-TDLEA 354
Query: 119 RREEKQK---KKMAV---KLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHK 172
RE+KQ+ +K+ + K+E+ + +E +T A+ R K+ QLS +Q +
Sbjct: 355 EREQKQRDFDRKLLLAKSKIEMEETDKEQLTAEAKELRQKVKYLQDQLSPLTRQ----RE 410
Query: 173 PSTKEIVRFSKLFEDQLALE 192
KEI R +K E+ L+++
Sbjct: 411 YQEKEIQRLNKALEEALSIQ 430
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 32.0 bits (71), Expect = 1.0
Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 30/198 (15%)
Query: 115 RRERRREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPS 174
+ + R E+ QK+ +LE K +ET+ + + + +L Y ++ + +
Sbjct: 306 KAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAEREL 365
Query: 175 TKEIVRFSKLFED----QLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKA 230
+++I R +L E+ Q E L+ ++ AL EL+ + IK+
Sbjct: 366 SEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELER------------QAVDQIKS 413
Query: 231 DDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLL 290
+++ A+ ++ L+ A R + ++ EWQ H + L+
Sbjct: 414 QEQLAAELAEYTAKIALLEEARRRK------------EDEVEEWQ--HRAKEAQDDLVKT 459
Query: 291 SRTFYLIDVKPKPIEIPL 308
+L+ P P P+
Sbjct: 460 KEELHLVMTAPPPPPPPV 477
>gi|21614499 ezrin [Homo sapiens]
Length = 586
Score = 32.0 bits (71), Expect = 1.0
Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 30/198 (15%)
Query: 115 RRERRREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPS 174
+ + R E+ QK+ +LE K +ET+ + + + +L Y ++ + +
Sbjct: 306 KAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAEREL 365
Query: 175 TKEIVRFSKLFED----QLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKA 230
+++I R +L E+ Q E L+ ++ AL EL+ + IK+
Sbjct: 366 SEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELER------------QAVDQIKS 413
Query: 231 DDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLL 290
+++ A+ ++ L+ A R + ++ EWQ H + L+
Sbjct: 414 QEQLAAELAEYTAKIALLEEARRRK------------EDEVEEWQ--HRAKEAQDDLVKT 459
Query: 291 SRTFYLIDVKPKPIEIPL 308
+L+ P P P+
Sbjct: 460 KEELHLVMTAPPPPPPPV 477
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 32.0 bits (71), Expect = 1.0
Identities = 35/189 (18%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Query: 98 KVAARMVWRLLHGQVLTRRERRREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDAS 157
+V + WRL V + + + QK++ +L LA +E + EM AK ++
Sbjct: 480 EVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESL 539
Query: 158 TQLSSYVKQVQTGHKPSTKEIVR------FSKLFEDQLALEHLDRPQLVALCKLLELQTF 211
++L + + +++ H E++R + L + ++ L + ++ +L+
Sbjct: 540 SELITLREALESSHLEG--ELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAA 597
Query: 212 GTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQL 271
L + L + + +++ E S ++AA +AR + L E + R++
Sbjct: 598 AV-KLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREA 656
Query: 272 TEWQDLHLK 280
++ HL+
Sbjct: 657 LWEKNTHLE 665
>gi|94681049 hypothetical protein LOC80217 [Homo sapiens]
Length = 1665
Score = 32.0 bits (71), Expect = 1.0
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 43 KPQLEQATKHPQVTSPQATKETGMEIKEGKQSYRQ--KIMDELKYYYNGFYLLWIDAKVA 100
+P++ + H + TS E K K ++ Q K MDEL N +
Sbjct: 1313 RPRISKQKTHSETTSVVPFGELPGSGKLNKDAFAQLMKAMDELDNISNM-------PEGL 1365
Query: 101 ARMVWRLLHGQVLTRRERRREEKQKKKMAVKLELAKFLQETMTE 144
+VW H + R + E+K K+K A LE+A FLQ+ + E
Sbjct: 1366 DPLVWN--HFCMTRRAKVENEQKVKQKAADLLEMATFLQKRVEE 1407
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 31.6 bits (70), Expect = 1.3
Identities = 57/255 (22%), Positives = 94/255 (36%), Gaps = 48/255 (18%)
Query: 117 ERRREEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTK 176
++ REEKQKK ++L+ K E EM R + + KP +
Sbjct: 149 KKAREEKQKK--LIELQAGKKSLEDQVEMLRTVK-----------------EEAEKPERE 189
Query: 177 EIVRFSKLFEDQLALEHLDRPQLVALCKLLEL--QTFGTNNLLRFQLLMKLKSIKADDEI 234
+ KL+E+QLA + Q +A EL GT ++ Q +L +
Sbjct: 190 AKEQHQKLWEEQLAAAKAQQEQELAADAFKELDDDMDGTVSVTELQTHPELDT------- 242
Query: 235 IAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTF 294
+G ALS +E QA +++ + +D + E +P L
Sbjct: 243 ---DGDGALSEAEAQALLSGDTQTDATSFYDRVWAAI---RDKYRSEALPTDL------- 289
Query: 295 YLIDVKPKPIEIPLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTS 354
P P L+ + + PT E +E + + ++ED + PP S
Sbjct: 290 ------PAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEEAPPPLS 343
Query: 355 SPITPSTPISLPKGP 369
P P++P K P
Sbjct: 344 PP-QPASPAEEDKMP 357
>gi|41349446 stromal interaction molecule 2 [Homo sapiens]
Length = 833
Score = 31.6 bits (70), Expect = 1.3
Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 47/224 (20%)
Query: 35 CWLQEVPGKPQLEQATKHPQ-VTSPQATKETGMEIKEG--------------KQSYRQKI 79
CW K E K + + S Q +++ M+++E KQ+ +K+
Sbjct: 318 CWFAYTQNKTSKEHVAKMMKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEKQNLERKM 377
Query: 80 MDELKYYYNGFYLLWIDAKVAARMVWRLLHGQ--VLTRRERRREEKQKKKMAVKL----- 132
MDE+ Y AK A + L G L+RR+ +E ++ +MA+K
Sbjct: 378 MDEINY-----------AKEEACRLRELREGAECELSRRQYAEQELEQVRMALKKAEKEF 426
Query: 133 ----------ELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEIVRFS 182
L K+LQ T + K +A QL+ + + K K F
Sbjct: 427 ELRSSWSVPDALQKWLQLTHEVEVQYYNIKRQNAEMQLAIAKDEAE---KIKKKRSTVFG 483
Query: 183 KL-FEDQLALEHLDRPQLVALCKLLELQTFGTNNLLRFQLLMKL 225
L +L+ +D L A L EL T L R+Q + K+
Sbjct: 484 TLHVAHSSSLDEVDHKILEAKKALSELTTCLRERLFRWQQIEKI 527
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,454,791
Number of Sequences: 37866
Number of extensions: 729576
Number of successful extensions: 3456
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 3242
Number of HSP's gapped (non-prelim): 305
length of query: 396
length of database: 18,247,518
effective HSP length: 104
effective length of query: 292
effective length of database: 14,309,454
effective search space: 4178360568
effective search space used: 4178360568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.