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Search of human proteins with 21389465
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389465 lysozyme-like 4 [Homo sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389465 lysozyme-like 4 [Homo sapiens] 318 1e-87
gi|27777653 sperm acrosome associated 3 [Homo sapiens] 127 3e-30
gi|9966905 lysozyme-like 6 [Homo sapiens] 120 5e-28
gi|73390143 lysozyme-like 1 [Homo sapiens] 114 2e-26
gi|73088987 lysozyme-like 2 [Homo sapiens] 112 1e-25
gi|118498373 sperm acrosome associated 5 [Homo sapiens] 112 1e-25
gi|120952755 sperm acrosome associated 5B [Homo sapiens] 112 1e-25
gi|4557894 lysozyme precursor [Homo sapiens] 109 7e-25
gi|4504947 lactalbumin, alpha- precursor [Homo sapiens] 61 4e-10
gi|28626504 fermitin family homolog 3 short form [Homo sapiens] 29 1.2
gi|41281905 fermitin family homolog 3 long form [Homo sapiens] 29 1.2
gi|94400919 WD repeat domain 90 [Homo sapiens] 27 6.2
gi|20336184 paired basic amino acid cleaving system 4 isoform h ... 27 8.0
gi|20336182 paired basic amino acid cleaving system 4 isoform g ... 27 8.0
gi|4505577 paired basic amino acid cleaving system 4 isoform a p... 27 8.0
gi|20336180 paired basic amino acid cleaving system 4 isoform b ... 27 8.0
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 27 8.0
>gi|21389465 lysozyme-like 4 [Homo sapiens]
Length = 146
Score = 318 bits (814), Expect = 1e-87
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
Sbjct: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGDHGRNRCHMSCSALLNPNLEKTIKCAKTIVKGKEG 120
AIYENTREGYTGFGLFQMRGSDWCGDHGRNRCHMSCSALLNPNLEKTIKCAKTIVKGKEG
Sbjct: 61 AIYENTREGYTGFGLFQMRGSDWCGDHGRNRCHMSCSALLNPNLEKTIKCAKTIVKGKEG 120
Query: 121 MGAWPTWSRYCQYSDTLARWLDGCKL 146
MGAWPTWSRYCQYSDTLARWLDGCKL
Sbjct: 121 MGAWPTWSRYCQYSDTLARWLDGCKL 146
>gi|27777653 sperm acrosome associated 3 [Homo sapiens]
Length = 215
Score = 127 bits (319), Expect = 3e-30
Identities = 64/142 (45%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 6 VLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPMAIYEN 65
++ LL L+ S A + GRC +A+ LHD GLD + GYSL +WVCLAYF S FN A+ +
Sbjct: 74 LVCLLSCLLPSSEAKLYGRCELARVLHDFGLDGYRGYSLADWVCLAYFTSGFNAAAL-DY 132
Query: 66 TREGYTGFGLFQMRGSDWCGD---HGRNRCHMSCSALLNPNLEKTIKCAKTIVKGKEGMG 122
+G T G+FQ+ WC + + N C M CS LLNPNL+ T+ CA I + +G+G
Sbjct: 133 EADGSTNNGIFQINSRRWCSNLTPNVPNVCRMYCSDLLNPNLKDTVICAMKITQEPQGLG 192
Query: 123 AWPTWSRYCQYSDTLARWLDGC 144
W W +CQ D L W+DGC
Sbjct: 193 YWEAWRHHCQGKD-LTEWVDGC 213
>gi|9966905 lysozyme-like 6 [Homo sapiens]
Length = 148
Score = 120 bits (300), Expect = 5e-28
Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
M ++++ L+ + + A ++ RC +A+ L LD FEGYSL +W+CLA+ ESKFN
Sbjct: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGD---HGRNRCHMSCSALLNPNLEKTIKCAKTIVKG 117
I EN +G +GLFQ+ WC D + N CH+ C LLNPNL I CAK IV G
Sbjct: 61 KINENA-DGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSG 119
Query: 118 KEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
GM W W +C L WL GC+L
Sbjct: 120 ARGMNNWVEWRLHCS-GRPLFYWLTGCRL 147
>gi|73390143 lysozyme-like 1 [Homo sapiens]
Length = 194
Score = 114 bits (286), Expect = 2e-26
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
MKA+ +L+L+G LV + + I RC +AK GLD + G+SL NW+C+AY+ES +N
Sbjct: 47 MKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESGYNTT 106
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGD---HGRNRCHMSCSALLNPNLEKTIKCAKTIVKG 117
A +G +G+FQ+ WC N CH++CSAL+ +L I CA+ IVK
Sbjct: 107 A-QTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALITDDLTDAIICARKIVKE 165
Query: 118 KEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
+GM W W ++C+ D L+ W GC++
Sbjct: 166 TQGMNYWQGWKKHCEGRD-LSEWKKGCEV 193
>gi|73088987 lysozyme-like 2 [Homo sapiens]
Length = 194
Score = 112 bits (279), Expect = 1e-25
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
MKA+ +L+L+G LV + + I RC +AK GLD + G+SL NW+C+AY+ES +N
Sbjct: 47 MKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESGYNTT 106
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGD---HGRNRCHMSCSALLNPNLEKTIKCAKTIVKG 117
A +G +G+FQ+ WC N CH++CSAL+ +L I CAK IVK
Sbjct: 107 A-QTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALVTDDLTDAIICAKKIVKE 165
Query: 118 KEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
+GM W W ++C+ D L+ W C++
Sbjct: 166 TQGMNYWQGWKKHCEGRD-LSDWKKDCEV 193
>gi|118498373 sperm acrosome associated 5 [Homo sapiens]
Length = 159
Score = 112 bits (279), Expect = 1e-25
Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 9/152 (5%)
Query: 1 MKA--SVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFN 58
MKA +VV++L +VV A I RC +A +L GL+ ++GY + +W+C+A++ES F+
Sbjct: 1 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD 60
Query: 59 PMAIYENTREGYTGFGLFQMRGSDWCGDHG----RNRCHMSCSALLNPNLEKTIKCAKTI 114
A ++ +G + +G+FQ+ + WC D+G +N CHM C LLN ++ I+CAK I
Sbjct: 61 T-AFVDHNPDGSSEYGIFQLNSAWWC-DNGITPTKNLCHMDCHDLLNRHILDDIRCAKQI 118
Query: 115 VKGKEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
V + G+ AW +W +C D L+ WL GC +
Sbjct: 119 VSSQNGLSAWTSWRLHCSGHD-LSEWLKGCDM 149
>gi|120952755 sperm acrosome associated 5B [Homo sapiens]
Length = 159
Score = 112 bits (279), Expect = 1e-25
Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 9/152 (5%)
Query: 1 MKA--SVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFN 58
MKA +VV++L +VV A I RC +A +L GL+ ++GY + +W+C+A++ES F+
Sbjct: 1 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD 60
Query: 59 PMAIYENTREGYTGFGLFQMRGSDWCGDHG----RNRCHMSCSALLNPNLEKTIKCAKTI 114
A ++ +G + +G+FQ+ + WC D+G +N CHM C LLN ++ I+CAK I
Sbjct: 61 T-AFVDHNPDGSSEYGIFQLNSAWWC-DNGITPTKNLCHMDCHDLLNRHILDDIRCAKQI 118
Query: 115 VKGKEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
V + G+ AW +W +C D L+ WL GC +
Sbjct: 119 VSSQNGLSAWTSWRLHCSGHD-LSEWLKGCDM 149
>gi|4557894 lysozyme precursor [Homo sapiens]
Length = 148
Score = 109 bits (273), Expect = 7e-25
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
MKA +VL L+ V G + RC +A+ L G+D + G SL NW+CLA +ES +N
Sbjct: 1 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR 59
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGD----HGRNRCHMSCSALLNPNLEKTIKCAKTIVK 116
A N + T +G+FQ+ WC D N CH+SCSALL N+ + CAK +V+
Sbjct: 60 ATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVR 119
Query: 117 GKEGMGAWPTWSRYCQYSDTLARWLDGC 144
+G+ AW W CQ D + +++ GC
Sbjct: 120 DPQGIRAWVAWRNRCQNRD-VRQYVQGC 146
>gi|4504947 lactalbumin, alpha- precursor [Homo sapiens]
Length = 142
Score = 60.8 bits (146), Expect = 4e-10
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
M+ V L L+G L A +C +++ L D +D + G +L +C + S ++
Sbjct: 1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLKD--IDGYGGIALPELICTMFHTSGYDTQ 58
Query: 61 AIYENTREGYTGFGLFQMRGSDWCGD----HGRNRCHMSCSALLNPNLEKTIKCAKTIVK 116
AI EN T +GLFQ+ WC RN C +SC L+ ++ I CAK I+
Sbjct: 59 AIVENNES--TEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILD 116
Query: 117 GKEGMGAWPTWSRYCQYSDTLARWL 141
K G+ W C ++ L +WL
Sbjct: 117 IK-GIDYWLAHKALC--TEKLEQWL 138
>gi|28626504 fermitin family homolog 3 short form [Homo sapiens]
Length = 663
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 96 CSALLNPNLEKTIKCAKTIVKGKEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
C + + N+ C K +V EGM + R CQ ARW+ GC+L
Sbjct: 403 CEVVPDVNVSGQKFCIKLLVPSPEGMSE--IYLR-CQDEQQYARWMAGCRL 450
>gi|41281905 fermitin family homolog 3 long form [Homo sapiens]
Length = 667
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 96 CSALLNPNLEKTIKCAKTIVKGKEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
C + + N+ C K +V EGM + R CQ ARW+ GC+L
Sbjct: 407 CEVVPDVNVSGQKFCIKLLVPSPEGMSE--IYLR-CQDEQQYARWMAGCRL 454
>gi|94400919 WD repeat domain 90 [Homo sapiens]
Length = 1748
Score = 26.9 bits (58), Expect = 6.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 19 AYILGRCTVAKKLHDGGLDYFEGYSLE 45
AY GR V + LH G ++ G+S E
Sbjct: 1134 AYTCGRLVVVEDLHSGAQQHWSGHSAE 1160
>gi|20336184 paired basic amino acid cleaving system 4 isoform h
preproprotein [Homo sapiens]
Length = 962
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 84 CGDHGRNRCHMSCSALLNPNLEKTIKCAK 112
CG+ CH +C + P E+ I CAK
Sbjct: 832 CGE-----CHHTCGTCVGPGREECIHCAK 855
>gi|20336182 paired basic amino acid cleaving system 4 isoform g
preproprotein [Homo sapiens]
Length = 975
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 84 CGDHGRNRCHMSCSALLNPNLEKTIKCAK 112
CG+ CH +C + P E+ I CAK
Sbjct: 845 CGE-----CHHTCGTCVGPGREECIHCAK 868
>gi|4505577 paired basic amino acid cleaving system 4 isoform a
preproprotein [Homo sapiens]
Length = 969
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 84 CGDHGRNRCHMSCSALLNPNLEKTIKCAK 112
CG+ CH +C + P E+ I CAK
Sbjct: 845 CGE-----CHHTCGTCVGPGREECIHCAK 868
>gi|20336180 paired basic amino acid cleaving system 4 isoform b
preproprotein [Homo sapiens]
Length = 956
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 84 CGDHGRNRCHMSCSALLNPNLEKTIKCAK 112
CG+ CH +C + P E+ I CAK
Sbjct: 832 CGE-----CHHTCGTCVGPGREECIHCAK 855
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 26.6 bits (57), Expect = 8.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 33 DGGLDYFEGYSLENWVCLAYFESKFNPMAIYENTREG 69
D G Y+E +E WV + F+P Y+ R G
Sbjct: 478 DRGTYYWEVEIIEGWVSMGVMAEDFSPQEPYDRGRLG 514
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,950,191
Number of Sequences: 37866
Number of extensions: 246537
Number of successful extensions: 460
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 434
Number of HSP's gapped (non-prelim): 17
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.