Guide to the Human Genome
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Name: LYZ Sequence: fasta or formatted (148aa) NCBI GI: 4557894
Description:

lysozyme precursor

Referenced in:

Galactose and Lactose
Mammary Tissues
Lacrimal and Salivary Glands

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         15           1
 C cysteine            5.4          8           1
 D aspartate           5.4          8           1
 E glutamate           2.0          3           1
 F phenylalanine       1.4          2           1
 G glycine             8.8         13           1
 H histidine           0.7          1           1
 I isoleucine          4.1          6           1
 K lysine              4.1          6           1
 L leucine             8.8         13           2
 M methionine          2.0          3           1
 N asparagine          6.8         10           1
 P proline             1.4          2           1
 Q glutamine           4.7          7           1
 R arginine            9.5         14           1
 S serine              4.7          7           1
 T threonine           4.1          6           1
 V valine              8.8         13           2
 W tryptophan          3.4          5           1
 Y tyrosine            4.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysozyme precursor 
SPACA3                0.425   sperm acrosome associated 3 
LYZL1                 0.415   lysozyme-like 1 
SPACA5                0.415   sperm acrosome associated 5 
SPACA5B               0.415   sperm acrosome associated 5B 
LYZL2                 0.408   lysozyme-like 2 
LYZL6                 0.345   lysozyme-like 6 
LYZL4                 0.293   lysozyme-like 4 
LALBA                 0.247   lactalbumin, alpha- precursor 
RHOG                  0.007   ras homolog gene family, member G 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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