Guide to the Human Genome
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Name: LYZL4 Sequence: fasta or formatted (146aa) NCBI GI: 21389465
Description:

lysozyme-like 4

Referenced in:

Galactose and Lactose
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          9           1
 C cysteine            5.5          8           1
 D aspartate           4.1          6           1
 E glutamate           4.8          7           1
 F phenylalanine       3.4          5           1
 G glycine            11.0         16           2
 H histidine           2.1          3           1
 I isoleucine          2.7          4           1
 K lysine              6.8         10           2
 L leucine            11.0         16           2
 M methionine          3.4          5           1
 N asparagine          4.1          6           1
 P proline             2.7          4           1
 Q glutamine           1.4          2           1
 R arginine            4.8          7           1
 S serine              6.8         10           1
 T threonine           4.8          7           1
 V valine              4.8          7           2
 W tryptophan          3.4          5           1
 Y tyrosine            6.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysozyme-like 4 
SPACA3                0.348   sperm acrosome associated 3 
LYZL6                 0.324   lysozyme-like 6 
LYZL1                 0.304   lysozyme-like 1 
LYZL2                 0.297   lysozyme-like 2 
SPACA5                0.297   sperm acrosome associated 5 
SPACA5B               0.297   sperm acrosome associated 5B 
LYZ                   0.287   lysozyme precursor 
LALBA                 0.123   lactalbumin, alpha- precursor 
FERMT3                0.014   fermitin family homolog 3 short form 
FERMT3                0.014   fermitin family homolog 3 long form 
WDR90                 0.007   WD repeat domain 90 
PCSK6                 0.007   paired basic amino acid cleaving system 4 isoform h ...
PCSK6                 0.007   paired basic amino acid cleaving system 4 isoform g ...
PCSK6                 0.007   paired basic amino acid cleaving system 4 isoform a p...
PCSK6                 0.007   paired basic amino acid cleaving system 4 isoform b ...
TRIM47                0.007   tripartite motif-containing 47 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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